Pregenerated sensors for LINC02514 (Homo sapiens)
Ensembl gene IDs: ENSG00000250042Ensembl transcript IDs: ENST00000509058.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTGGGGATATATGGAAACGTGACCATTCCTTGGGTTCCTTCATGTaGGAGATGCAGACTGGGCTATGTTTGGGACATTGGTCTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SGDIWKRDHSLGSFM*EMQTGLCLGHWSLG Trigger: ACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATGGTCACGTTTCCATATATCCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS GCA 90 bp | CAATGCAGTTCCCTGGAAAACACGAGGCTTATCTTCATGCAGCTTTaGCAGATGGATGTGAAACTCCTCCAGCTGATCCTTGTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: QCSSLENTRLIFMQL*QMDVKLLQLILVET Trigger: GGTTTCCACAAGGATCAGCTGGAGGAGTTTCACATCCATCTGGCAAAGCTGCATGAAGATAAGCCTCGTGTTTTCCAGGGAACTGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS GCA 90 bp | ATATATGGAAACGTGACCATTCCTTGGGTTCCTTCATGTGGGAGATaGAGACTGGGCTATGTTTGGGACATTGGTCTCTGGGTTTCATTC | + |
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Preference number: 5 (lower is better) Translates to: IYGNVTIPWVPSCGR*RLGYVWDIGLWVSF Trigger: GAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATGGTCACGTTTCCATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CCA 90 bp | ATTCCTTGGGTTCCTTCATGTGGGAGATGCAGACTGGGCTATGTTTaGGACATTGGTCTCTGGGTTTCATTCATCACACTCCAGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: IPWVPSCGRCRLGYV*DIGLWVSFITLQYF Trigger: GAAATACTGGAGTGTGATGAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS GCA 72 bp | AACGTGACCATTCCTTGGGTTCCTTCATGTGGGAGATaGAGACTGGGCTATGTTTGGGACATTGGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: NVTIPWVPSCGR*RLGYVWDIGLW Trigger: CCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATGGTCACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CCA 72 bp | CCATTCCTTGGGTTCCTTCATGTGGGAGATGCAGACTaGGCTATGTTTGGGACATTGGTCTCTGGGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PFLGFLHVGDAD*AMFGTLVSGFH Trigger: ATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CAA 90 bp | GCAATGCAGTTCCCTGGAAAACACGAGGCTTATCTTCATGCAGCTTaGCCAGATGGATGTGAAACTCCTCCAGCTGATCCTTGTGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AMQFPGKHEAYLHAA*PDGCETPPADPCGN Trigger: GTTTCCACAAGGATCAGCTGGAGGAGTTTCACATCCATCTGGCAAAGCTGCATGAAGATAAGCCTCGTGTTTTCCAGGGAACTGCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS GCA 72 bp | TCCCTGGAAAACACGAGGCTTATCTTCATGCAGCTTTaGCAGATGGATGTGAAACTCCTCCAGCTGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: SLENTRLIFMQL*QMDVKLLQLIL Trigger: AAGGATCAGCTGGAGGAGTTTCACATCCATCTGGCAAAGCTGCATGAAGATAAGCCTCGTGTTTTCCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CCA 72 bp | GTTCCTTCATGTGGGAGATGCAGACTGGGCTATGTTTaGGACATTGGTCTCTGGGTTTCATTCATCACACTC | + |
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Preference number: 6 (lower is better) Translates to: VPSCGRCRLGYV*DIGLWVSFITL Trigger: GAGTGTGATGAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CCA 72 bp | ATATGGAAACGTGACCATTCCTTGGGTTCCTTCATGTaGGAGATGCAGACTGGGCTATGTTTGGGACATTGG | + |
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Preference number: 6 (lower is better) Translates to: IWKRDHSLGSFM*EMQTGLCLGHW Trigger: CCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATGGTCACGTTTCCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CAA 72 bp | TTCCCTGGAAAACACGAGGCTTATCTTCATGCAGCTTaGCCAGATGGATGTGAAACTCCTCCAGCTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: FPGKHEAYLHAA*PDGCETPPADP Trigger: AGGATCAGCTGGAGGAGTTTCACATCCATCTGGCAAAGCTGCATGAAGATAAGCCTCGTGTTTTCCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CAA 90 bp | GGGTTCCTTCATGTGGGAGATGCAGACTGGGCTATGTTTGGGACATaGGTCTCTGGGTTTCATTCATCACACTCCAGTATTTCAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GFLHVGDADWAMFGT*VSGFHSSHSSISIS Trigger: TGAGATTGAAATACTGGAGTGTGATGAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CAA 90 bp | CATTCCTTGGGTTCCTTCATGTGGGAGATGCAGACTGGGCTATGTTaGGGACATTGGTCTCTGGGTTTCATTCATCACACTCCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: HSLGSFMWEMQTGLC*GHWSLGFIHHTPVF Trigger: AAATACTGGAGTGTGATGAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATGAAGGAACCCAAGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS CAA 72 bp | CATGTGGGAGATGCAGACTGGGCTATGTTTGGGACATaGGTCTCTGGGTTTCATTCATCACACTCCAGTATT | + |
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Preference number: 6 (lower is better) Translates to: HVGDADWAMFGT*VSGFHSSHSSI Trigger: AATACTGGAGTGTGATGAATGAAACCCAGAGACCAATGTCCCAAACATAGCCCAGTCTGCATCTCCCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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| CDS GCA 72 bp | TCAACATTATGTAGCCTAGATTGTCCAATTTCCTCCTaGTCTTTTGCCTCTTCAGGTAATGGAATCACACTC | + |
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Preference number: 6 (lower is better) Translates to: STLCSLDCPISS*SFASSGNGITL Trigger: GAGTGTGATTCCATTACCTGAAGAGGCAAAAGAGCAGGAGGAAATTGGACAATCTAGGCTACATAATGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509058.1 |
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