Pregenerated sensors for LINC02510 (Homo sapiens)
Ensembl gene IDs: ENSG00000250341Ensembl transcript IDs: ENST00000509798.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AAGCAGATGATGAATCTTCTCCACACTTCTGTTCCACTGCCCGGATaGAGAGGACTTCAAAATCCTGGAGGACTGTTTCACTCAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KQMMNLLHTSVPLPG*RGLQNPGGLFHSEF Trigger: AAACTCTGAGTGAAACAGTCCTCCAGGATTTTGAAGTCCTCTGCATCCGGGCAGTGGAACAGAAGTGTGGAGAAGATTCATCATCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 90 bp | TGTCTACCTCCAGAGTGCAGAGTTGTCATCAGAAGGCAACTGCCTTaGCAGGACTATGTTTTCTTGCTCTTCTCACATCTATTTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: CLPPECRVVIRRQLP*QDYVFLLFSHLFVA Trigger: GGCTACAAATAGATGTGAGAAGAGCAAGAAAACATAGTCCTGGCAAGGCAGTTGCCTTCTGATGACAACTCTGCACTCTGGAGGTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 90 bp | GCAGCCCATGTCTCCAAGAGTAGCTTTCAAACTCCAGTATCAGTCTaGCCCTGTAACATGGTTAAAGCTTTCATAACCACTGCAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: AAHVSKSSFQTPVSV*PCNMVKAFITTAEK Trigger: CTTTTCTGCAGTGGTTATGAAAGCTTTAACCATGTTACAGGGGCAGACTGATACTGGAGTTTGAAAGCTACTCTTGGAGACATGGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 90 bp | AAATTTGTCTACCTCCAGAGTGCAGAGTTGTCATCAGAAGGCAACTaGCTTGCCAGGACTATGTTTTCTTGCTCTTCTCACATCTATTTG | + |
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Preference number: 5 (lower is better) Translates to: KFVYLQSAELSSEGN*LARTMFSCSSHIYL Trigger: CAAATAGATGTGAGAAGAGCAAGAAAACATAGTCCTGGCAAGGCAGTTGCCTTCTGATGACAACTCTGCACTCTGGAGGTAGACAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS TCA 90 bp | TGTGAAGGTGAGTACTGGACTAATATGGCTAAAACTGCCAGCTATTaGCCAAAATTTGTCTACCTCCAGAGTGCAGAGTTGTCATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: CEGEYWTNMAKTASY*PKFVYLQSAELSSE Trigger: TTCTGATGACAACTCTGCACTCTGGAGGTAGACAAATTTTGGTCAATAGCTGGCAGTTTTAGCCATATTAGTCCAGTACTCACCTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS TCA 90 bp | TGCTTTTCTTCACATTTAGTTCTTTTCTACAGCCAAATGGCACTGTaGGAGTATCTGTGGAATCTAAATCCTATCCAGGACCCAGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: CFSSHLVLFYSQMAL*EYLWNLNPIQDPGY Trigger: ATAGCCTGGGTCCTGGATAGGATTTAGATTCCACAGATACTCTCACAGTGCCATTTGGCTGTAGAAAAGAACTAAATGTGAAGAAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS TCA 90 bp | ATGGTTAAAGCTTTCATAACCACTGCAGAAAAGTCTAAAATCTTCTaGCATGCTGACAGCAGAATGACACCAGTTATATTTCTATACATG | + |
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Preference number: 5 (lower is better) Translates to: MVKAFITTAEKSKIF*HADSRMTPVIFLYM Trigger: CATGTATAGAAATATAACTGGTGTCATTCTGCTGTCAGCATGTCAGAAGATTTTAGACTTTTCTGCAGTGGTTATGAAAGCTTTAACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS CCA 72 bp | TGTTCCACTGCCCGGATGCAGAGGACTTCAAAATCCTaGAGGACTGTTTCACTCAGAGTTTCATTGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: CSTARMQRTSKS*RTVSLRVSLRT Trigger: TGTGCGCAATGAAACTCTGAGTGAAACAGTCCTCCAGGATTTTGAAGTCCTCTGCATCCGGGCAGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 72 bp | ATGAATCTTCTCCACACTTCTGTTCCACTGCCCGGATaGAGAGGACTTCAAAATCCTGGAGGACTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: MNLLHTSVPLPG*RGLQNPGGLFH Trigger: GTGAAACAGTCCTCCAGGATTTTGAAGTCCTCTGCATCCGGGCAGTGGAACAGAAGTGTGGAGAAGATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 72 bp | TACCTCCAGAGTGCAGAGTTGTCATCAGAAGGCAACTaGCTTGCCAGGACTATGTTTTCTTGCTCTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: YLQSAELSSEGN*LARTMFSCSSH Trigger: GTGAGAAGAGCAAGAAAACATAGTCCTGGCAAGGCAGTTGCCTTCTGATGACAACTCTGCACTCTGGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS CAA 72 bp | TCCAGAGTGCAGAGTTGTCATCAGAAGGCAACTGCCTaGCCAGGACTATGTTTTCTTGCTCTTCTCACATCT | + |
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Preference number: 6 (lower is better) Translates to: SRVQSCHQKATA*PGLCFLALLTS Trigger: AGATGTGAGAAGAGCAAGAAAACATAGTCCTGGCAAGGCAGTTGCCTTCTGATGACAACTCTGCACTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS CAA 90 bp | TTGTCTACCTCCAGAGTGCAGAGTTGTCATCAGAAGGCAACTGCCTaGCCAGGACTATGTTTTCTTGCTCTTCTCACATCTATTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LSTSRVQSCHQKATA*PGLCFLALLTSICS Trigger: GCTACAAATAGATGTGAGAAGAGCAAGAAAACATAGTCCTGGCAAGGCAGTTGCCTTCTGATGACAACTCTGCACTCTGGAGGTAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS GCA 72 bp | GTCTCCAAGAGTAGCTTTCAAACTCCAGTATCAGTCTaGCCCTGTAACATGGTTAAAGCTTTCATAACCACT | + |
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Preference number: 6 (lower is better) Translates to: VSKSSFQTPVSV*PCNMVKAFITT Trigger: AGTGGTTATGAAAGCTTTAACCATGTTACAGGGGCAGACTGATACTGGAGTTTGAAAGCTACTCTTGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS CAA 90 bp | CAGAGGACTTCAAAATCCTGGAGGACTGTTTCACTCAGAGTTTCATaGCGCACAGCAGAAATCATAATCGCGATTTTAAGCTTGAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QRTSKSWRTVSLRVS*RTAEIIIAILSLKV Trigger: TACCTTCAAGCTTAAAATCGCGATTATGATTTCTGCTGTGCGCAATGAAACTCTGAGTGAAACAGTCCTCCAGGATTTTGAAGTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS CAA 72 bp | TCAAAATCCTGGAGGACTGTTTCACTCAGAGTTTCATaGCGCACAGCAGAAATCATAATCGCGATTTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SKSWRTVSLRVS*RTAEIIIAILS Trigger: GCTTAAAATCGCGATTATGATTTCTGCTGTGCGCAATGAAACTCTGAGTGAAACAGTCCTCCAGGATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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| CDS TCA 72 bp | TCACATTTAGTTCTTTTCTACAGCCAAATGGCACTGTaGGAGTATCTGTGGAATCTAAATCCTATCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SHLVLFYSQMAL*EYLWNLNPIQD Trigger: GTCCTGGATAGGATTTAGATTCCACAGATACTCTCACAGTGCCATTTGGCTGTAGAAAAGAACTAAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509798.1 |
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