Pregenerated sensors for LINC02509 (Homo sapiens)
Ensembl gene IDs: ENSG00000250263Ensembl transcript IDs: ENST00000508790.1, ENST00000661162.1, ENST00000667277.1, ENST00000670563.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCTGGCGGCCTCTGAATATGTCCTGGGACTCCAGTCGAGCCCTTaGCAGCGGAGCTTCCAGAAAAGAGGCTTTTGGAGGGCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLAASEYVLGLQSSP*QRSFQKRGFWRATS Trigger: GGAGGTGGCCCTCCAAAAGCCTCTTTTCTGGAAGCTCCGCTGCCAAGGGCTCGACTGGAGTCCCAGGACATATTCAGAGGCCGCCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS GCA 90 bp | AAGAGGCTTTTGGAGGGCCACCTCCGACCTTCCTACCTCAGCAGCTaGTCCCTTTCATTCCAAAGTCAGTTTGAGTTTAGAAACCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: KRLLEGHLRPSYLSS*SLSFQSQFEFRNRR Trigger: TCTTCGGTTTCTAAACTCAAACTGACTTTGGAATGAAAGGGAGCAGCTGCTGAGGTAGGAAGGTCGGAGGTGGCCCTCCAAAAGCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS TCA 90 bp | AGGCTTGGATCTCACTTGTTTTGCTTCGTATGTGCAAATCAACTCTaGATTCTTGTTTCCTCATCTGCAAAAGTGAATGTCCATGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: RLGSHLFCFVCANQL*ILVSSSAKVNVHAG Trigger: TCCGGCATGGACATTCACTTTTGCAGATGAGGAAACAAGAATTCAGAGTTGATTTGCACATACGAAGCAAAACAAGTGAGATCCAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670563.1 |
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| CDS CCA 72 bp | CTCCATGCAGGGGTCTGGCGGCCTCTGAATATGTCCTaGGACTCCAGTCGAGCCCTTGGCAGCGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LHAGVWRPLNMS*DSSRALGSGAS Trigger: GGAAGCTCCGCTGCCAAGGGCTCGACTGGAGTCCCAGGACATATTCAGAGGCCGCCAGACCCCTGCATGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS CAA 72 bp | GAGCCCTTGGCAGCGGAGCTTCCAGAAAAGAGGCTTTaGGAGGGCCACCTCCGACCTTCCTACCTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EPLAAELPEKRL*EGHLRPSYLSS Trigger: GCTGCTGAGGTAGGAAGGTCGGAGGTGGCCCTCCAAAAGCCTCTTTTCTGGAAGCTCCGCTGCCAAGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS CCA 72 bp | AGCCCTTGGCAGCGGAGCTTCCAGAAAAGAGGCTTTTaGAGGGCCACCTCCGACCTTCCTACCTCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPWQRSFQKRGF*RATSDLPTSAA Trigger: AGCTGCTGAGGTAGGAAGGTCGGAGGTGGCCCTCCAAAAGCCTCTTTTCTGGAAGCTCCGCTGCCAAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS CCA 72 bp | GCCTCTGAATATGTCCTGGGACTCCAGTCGAGCCCTTaGCAGCGGAGCTTCCAGAAAAGAGGCTTTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASEYVLGLQSSP*QRSFQKRGFWR Trigger: CCTCCAAAAGCCTCTTTTCTGGAAGCTCCGCTGCCAAGGGCTCGACTGGAGTCCCAGGACATATTCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS CCA 72 bp | AGTGGCTCTATGCCTTCTGAGGAGCTTAATCGGAAATaGCCAGCAGAGCCTGGCCTGGCCCTGGTAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SGSMPSEELNRK*PAEPGLALVGK Trigger: TTTTCCTACCAGGGCCAGGCCAGGCTCTGCTGGCCATTTCCGATTAAGCTCCTCAGAAGGCATAGAGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS TCA 72 bp | AGTGAATGTCCATGCCGGAAGTGCAGTAGACTTATGTaGCGTCCCAGTGACAGGGAAGAATGCAGGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: SECPCRKCSRLM*RPSDREECRTD Trigger: ATCGGTCCTGCATTCTTCCCTGTCACTGGGACGTCACATAAGTCTACTGCACTTCCGGCATGGACATTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670563.1 |
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| CDS GCA 72 bp | TTGGAGGGCCACCTCCGACCTTCCTACCTCAGCAGCTaGTCCCTTTCATTCCAAAGTCAGTTTGAGTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LEGHLRPSYLSS*SLSFQSQFEFR Trigger: TCTAAACTCAAACTGACTTTGGAATGAAAGGGAGCAGCTGCTGAGGTAGGAAGGTCGGAGGTGGCCCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS TCA 72 bp | TGCTTTCACAGAGGAAACCTTGACAACATAGGTGGCTaGGGCTCGGAGCTGCAGGACATCATTCAATCATGG | + |
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Preference number: 6 (lower is better) Translates to: CFHRGNLDNIGG*GSELQDIIQSW Trigger: CCATGATTGAATGATGTCCTGCAGCTCCGAGCCTCAGCCACCTATGTTGTCAAGGTTTCCTCTGTGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS CAA 72 bp | CCCAGTGACAGGGAAGAATGCAGGACCGATCACAGCTaGATTTACGTAGTTCTTGACACCGTGTTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSDREECRTDHS*IYVVLDTVFAR Trigger: TCTGGCAAACACGGTGTCAAGAACTACGTAAATCAAGCTGTGATCGGTCCTGCATTCTTCCCTGTCACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670563.1 |
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| CDS CCA 72 bp | GGAAGGCCATCTTCCAATTTAGATCTCTTGGACTCCTaGATATTCTCAGGAACGAAGCCCACCTCTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GRPSSNLDLLDS*IFSGTKPTSRL Trigger: AAGACGAGAGGTGGGCTTCGTTCCTGAGAATATCCAGGAGTCCAAGAGATCTAAATTGGAAGATGGCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508790.1 ENST00000661162.1 ENST00000667277.1 |
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| CDS TCA 72 bp | AATCATGGCCGATCCAAGAAACATTGCTATTCCCAGTaGAATTTCCATTGTCTCAGCAGCTGCTCCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: NHGRSKKHCYSQ*NFHCLSSCSLS Trigger: TGAAAGGGAGCAGCTGCTGAGACAATGGAAATTTCACTGGGAATAGCAATGTTTCTTGGATCGGCCATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670563.1 |
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| CDS TCA 72 bp | ATGCAGGACCGATCACAGCTTGATTTACGTAGTTCTTaGCACCGTGTTTGCCAGACAGACATTGTTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: MQDRSQLDLRSS*HRVCQTDIVSS Trigger: ACTTGAAACAATGTCTGTCTGGCAAACACGGTGTCAAGAACTACGTAAATCAAGCTGTGATCGGTCCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670563.1 |
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| CDS TCA 72 bp | GAGTTTCGGGAAGTAGAGGACCAGCAAGTTGATAGTTaGATTCTAAATTGGAAGGCCATCTTCCAATTTAGA | + |
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Preference number: 6 (lower is better) Translates to: EFREVEDQQVDS*ILNWKAIFQFR Trigger: TCTAAATTGGAAGATGGCCTTCCAATTTAGAATTCAACTATCAACTTGCTGGTCCTCTACTTCCCGAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661162.1 |
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