Pregenerated sensors for LINC02508 (Homo sapiens)
Ensembl gene IDs: ENSG00000251619Ensembl transcript IDs: ENST00000504165.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCATGTCTGAAGCGTTCAGATGGAAGCTGGTTGTGCAGGCACGCTaGCTCAGGGCATGTGTTCGGGAGCAGTGGGACTCCGGCAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RMSEAFRWKLVVQAR*LRACVREQWDSGKD Trigger: GTCCTTGCCGGAGTCCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CCA 90 bp | CTGGTTGTGCAGGCACGCTGCCTCAGGGCATGTGTTCGGGAGCAGTaGGACTCCGGCAAGGACAGAAAAGCCAGGAGAATCCACAGACCC | + |
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Preference number: 5 (lower is better) Translates to: LVVQARCLRACVREQ*DSGKDRKARRIHRP Trigger: GGGTCTGTGGATTCTCCTGGCTTTTCTGTCCTTGCCGGAGTCCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CCA 90 bp | CCCTGCCCTGAATGCAGCGCATGTCTGAAGCGTTCAGATGGAAGCTaGTTGTGCAGGCACGCTGCCTCAGGGCATGTGTTCGGGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PCPECSACLKRSDGS*LCRHAASGHVFGSS Trigger: ACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCGCTGCATTCAGGGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS GCA 90 bp | CCTGAATGCAGCGCATGTCTGAAGCGTTCAGATGGAAGCTGGTTGTaGAGGCACGCTGCCTCAGGGCATGTGTTCGGGAGCAGTGGGACT | + |
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Preference number: 5 (lower is better) Translates to: PECSACLKRSDGSWL*RHAASGHVFGSSGT Trigger: AGTCCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCGCTGCATTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS GCA 90 bp | GCTTCCATCCGCCTACATATAAACCACAGATTATTTTCCAGTACATaGAGGTCATCTTTATCTGATACTTCTCAGCTTCTCTGTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ASIRLHINHRLFSST*RSSLSDTSQLLCPR Trigger: TCTTGGACAGAGAAGCTGAGAAGTATCAGATAAAGATGACCTGCATGTACTGGAAAATAATCTGTGGTTTATATGTAGGCGGATGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS GCA 72 bp | CAGGAGAATCCACAGACCCTTCTGAAGGAGGTGGTTTaGCACCGCAGGCTCCGCGGGACAGCCAAGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: QENPQTLLKEVV*HRRLRGTAKEL Trigger: CAGTTCCTTGGCTGTCCCGCGGAGCCTGCGGTGGCAAACCACCTCCTTCAGAAGGGTCTGTGGATTCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS GCA 72 bp | GAAGCGTTCAGATGGAAGCTGGTTGTGCAGGCACGCTaGCTCAGGGCATGTGTTCGGGAGCAGTGGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: EAFRWKLVVQAR*LRACVREQWDS Trigger: GGAGTCCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CCA 72 bp | CAGGCACGCTGCCTCAGGGCATGTGTTCGGGAGCAGTaGGACTCCGGCAAGGACAGAAAAGCCAGGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: QARCLRACVREQ*DSGKDRKARRI Trigger: GATTCTCCTGGCTTTTCTGTCCTTGCCGGAGTCCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CAA 72 bp | CCAGGAGAATCCACAGACCCTTCTGAAGGAGGTGGTTaGCCACCGCAGGCTCCGCGGGACAGCCAAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: PGESTDPSEGGG*PPQAPRDSQGT Trigger: AGTTCCTTGGCTGTCCCGCGGAGCCTGCGGTGGCAAACCACCTCCTTCAGAAGGGTCTGTGGATTCTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CAA 90 bp | TGCCCTGAATGCAGCGCATGTCTGAAGCGTTCAGATGGAAGCTGGTaGTGCAGGCACGCTGCCTCAGGGCATGTGTTCGGGAGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CPECSACLKRSDGSW*CRHAASGHVFGSSG Trigger: CCCACTGCTCCCGAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCGCTGCATTCAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS CCA 72 bp | GAATGCAGCGCATGTCTGAAGCGTTCAGATGGAAGCTaGTTGTGCAGGCACGCTGCCTCAGGGCATGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: ECSACLKRSDGS*LCRHAASGHVF Trigger: GAACACATGCCCTGAGGCAGCGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCGCTGCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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| CDS TCA 72 bp | CCAAGAAAAGTCCCTGCCCTGAATGCAGCGCATGTCTaGAGCGTTCAGATGGAAGCTGGTTGTGCAGGCACG | + |
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Preference number: 6 (lower is better) Translates to: PRKVPALNAAHV*SVQMEAGCAGT Trigger: CGTGCCTGCACAACCAGCTTCCATCTGAACGCTTCAGACATGCGCTGCATTCAGGGCAGGGACTTTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504165.1 |
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