Pregenerated sensors for LINC02506 (Homo sapiens)
Ensembl gene IDs: ENSG00000251129Ensembl transcript IDs: ENST00000513211.2, ENST00000655951.1, ENST00000657576.1, ENST00000659613.1, ENST00000660373.1, ENST00000662669.1, ENST00000665582.1, ENST00000667252.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCGGATGTGTTTGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCTaGCTCAAGAGTGAAGCTGCGGACCTTCGCAGTGAGTGCTACAGC | + |
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Preference number: 5 (lower is better) Translates to: SDVFGVSSFWWVRGL*LKSEAADLRSECYS Trigger: GCTGTAGCACTCACTGCGAAGGTCCGCAGCTTCACTCTTGAGCCAGAGACCACGAACCCACCAGAAGGAAGAAACTCCAAACACATCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS GCA 90 bp | GATGGTGCTGGTGATGATGACAACATTTATTTGGAGCAAACCCTGTaGCAGGAACTGTTCTTCACATGCAGCAAGTCATCTAGATTCCCC | + |
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Preference number: 5 (lower is better) Translates to: DGAGDDDNIYLEQTL*QELFFTCSKSSRFP Trigger: GGGGAATCTAGATGACTTGCTGCATGTGAAGAACAGTTCCTGGCACAGGGTTTGCTCCAAATAAATGTTGTCATCATCACCAGCACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659613.1 ENST00000662669.1 |
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| CDS GCA 90 bp | GATGGTGCTGGTGATGATGACAACATTTATTTGGAGCAAACCCTGTaGCAGGAACTGTTCTTCACATGCAGCAAGTCATCTGTAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: DGAGDDDNIYLEQTL*QELFFTCSKSSVIP Trigger: TGGGATTACAGATGACTTGCTGCATGTGAAGAACAGTTCCTGGCACAGGGTTTGCTCCAAATAAATGTTGTCATCATCACCAGCACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513211.2 |
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| CDS TCA 90 bp | AGATATCAACTGGTTCAGGTCCTGGCTGTGCACATATTTGATGTATaGTCTTGGGCCTCTTGCAAAAACTGTCTATGCTTCACTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: RYQLVQVLAVHIFDV*SWASCKNCLCFTVF Trigger: AAAAACAGTGAAGCATAGACAGTTTTTGCAAGAGGCCCAAGATCATACATCAAATATGTGCACAGCCAGGACCTGAACCAGTTGATATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660373.1 ENST00000665582.1 |
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| CDS CCA 72 bp | CTCCAGGGTCCACACAAAATTCTGCAGAGGGTTAGGTaGGTAGTCTGCCCTCTCCTGGCCTTCCAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LQGPHKILQRVR*VVCPLLAFQAA Trigger: AGCAGCCTGGAAGGCCAGGAGAGGGCAGACTACCCACCTAACCCTCTGCAGAATTTTGTGTGGACCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000662669.1 ENST00000665582.1 ENST00000667252.1 |
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| CDS CAA 90 bp | GAGCTCCCCTCTGCCTTTGGTAGTGTGTCTGGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACCCTCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ELPSAFGSVSGIGGF*VSLTSRMKPRTLAV Trigger: CACTGCGAGGGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACACTACCAAAGGCAGAGGGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS CCA 72 bp | TTTGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCTaGCTCAAGAGTGAAGCTGCGGACCTTCGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FGVSSFWWVRGL*LKSEAADLRSE Trigger: CTCACTGCGAAGGTCCGCAGCTTCACTCTTGAGCCAGAGACCACGAACCCACCAGAAGGAAGAAACTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS CCA 72 bp | ACCACTACACTCCAGCCTGCAGGAGAAGTTAGTTTCTaGTCTCCAGGGTCCACACAAAATTCTGCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: TTTLQPAGEVSF*SPGSTQNSAEG Trigger: ACCCTCTGCAGAATTTTGTGTGGACCCTGGAGACCAGAAACTAACTTCTCCTGCAGGCTGGAGTGTAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667252.1 |
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| CDS CAA 72 bp | TCTGCCTTTGGTAGTGTGTCTGGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: SAFGSVSGIGGF*VSLTSRMKPRT Trigger: GGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACACTACCAAAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS GCA 72 bp | TTGGAGCAAACCCTGTGCCAGGAACTGTTCTTCACATaGAGCAAGTCATCTGTAATCCCAGCTACTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LEQTLCQELFFT*SKSSVIPATQE Trigger: CTCCTGAGTAGCTGGGATTACAGATGACTTGCTGCATGTGAAGAACAGTTCCTGGCACAGGGTTTGCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513211.2 |
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| CDS CCA 72 bp | GAGCAAGACCTTGTCTCTGCAGGAGAAGTTAGTTTCTaGTCTCCAGGGTCCACACAAAATTCTGCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: EQDLVSAGEVSF*SPGSTQNSAEG Trigger: ACCCTCTGCAGAATTTTGTGTGGACCCTGGAGACCAGAAACTAACTTCTCCTGCAGAGACAAGGTCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS GCA 72 bp | GTCTGGACCCAAAGAGTGAGCAGCAGCAAGCTTTATTaGAAAGAGCAAAAGAACAAACCTCCCACAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VWTQRVSSSKLY*KEQKNKPPTVW Trigger: CCACACTGTGGGAGGTTTGTTCTTTTGCTCTTTGCAATAAAGCTTGCTGCTGCTCACTCTTTGGGTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS CAA 90 bp | CATAAAGACAGTCTGGACCCAAAGAGTGAGCAGCAGCAAGCTTTATaGCAAAGAGCAAAAGAACAAACCTCCCACAGTGTGGAAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HKDSLDPKSEQQQAL*QRAKEQTSHSVEGD Trigger: ATCCCCTTCCACACTGTGGGAGGTTTGTTCTTTTGCTCTTTGCAATAAAGCTTGCTGCTGCTCACTCTTTGGGTCCAGACTGTCTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS CAA 72 bp | AGTCTGGACCCAAAGAGTGAGCAGCAGCAAGCTTTATaGCAAAGAGCAAAAGAACAAACCTCCCACAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLDPKSEQQQAL*QRAKEQTSHSV Trigger: CACACTGTGGGAGGTTTGTTCTTTTGCTCTTTGCAATAAAGCTTGCTGCTGCTCACTCTTTGGGTCCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000659613.1 ENST00000660373.1 ENST00000662669.1 ENST00000665582.1 |
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| CDS TCA 72 bp | GGCTGCTGTTTCCTTGTCCGCAAGGCGACCATTTCCTaGCACTTCCATTTAGGCTTCATATTCTTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GCCFLVRKATIS*HFHLGFIFFVS Trigger: AGAAACAAAGAATATGAAGCCTAAATGGAAGTGTCAGGAAATGGTCGCCTTGCGGACAAGGAAACAGCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000513211.2 ENST00000655951.1 ENST00000657576.1 ENST00000662669.1 ENST00000665582.1 ENST00000667252.1 |
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| CDS TCA 72 bp | CTGGTTCAGGTCCTGGCTGTGCACATATTTGATGTATaGTCTTGGGCCTCTTGCAAAAACTGTCTATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVQVLAVHIFDV*SWASCKNCLCF Trigger: GAAGCATAGACAGTTTTTGCAAGAGGCCCAAGATCATACATCAAATATGTGCACAGCCAGGACCTGAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660373.1 ENST00000665582.1 |
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| CDS GCA 72 bp | GGTGATGATGACAACATTTATTTGGAGCAAACCCTGTaGCAGGAACTGTTCTTCACATGCAGCAAGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GDDDNIYLEQTL*QELFFTCSKSS Trigger: AGATGACTTGCTGCATGTGAAGAACAGTTCCTGGCACAGGGTTTGCTCCAAATAAATGTTGTCATCATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000513211.2 ENST00000657576.1 ENST00000659613.1 ENST00000662669.1 |
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| CDS TCA 72 bp | ATATCAACTGGTTCAGGTCCTGGCTGTGCACATATTTaGTGTATGATCTTGGGCCTCTTGCAAAAACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ISTGSGPGCAHI*CMILGLLQKLS Trigger: AGACAGTTTTTGCAAGAGGCCCAAGATCATACATCAAATATGTGCACAGCCAGGACCTGAACCAGTTGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660373.1 ENST00000665582.1 |
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