Pregenerated sensors for LINC02505 (Homo sapiens)
Ensembl gene IDs: ENSG00000248215Ensembl transcript IDs: ENST00000505298.5, ENST00000510597.6, ENST00000515128.2, ENST00000655716.1, ENST00000662117.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GATGACCCCTCCACTCTCTCCAGTCACAATTGCCATGCCCCCACCTaGTGTCTGGAGCAGAAACTCAGGGCATGGGAATCATCGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: DDPSTLSSHNCHAPT*CLEQKLRAWESSHF Trigger: GAAATGCGATGATTCCCATGCCCTGAGTTTCTGCTCCAGACACCAGGTGGGGGCATGGCAATTGTGACTGGAGAGAGTGGAGGGGTCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS CCA 90 bp | TCATTCATTCAGGCGTTGGAAAAATGTCACCTAGTTCCACATGGCTaGGGAGGCCTCAGGAAACTTACAATCATGGTGGAAGGTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SFIQALEKCHLVPHG*GGLRKLTIMVEGEG Trigger: TCCTTCACCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTAGGTGACATTTTTCCAACGCCTGAATGAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505298.5 |
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| CDS TCA 90 bp | GCAATAAAGTATCATGAATCAATCCTAACAGTGACTCATCTTTCTTaGCATCCTCTTCAATGGCAATCCCGCCTGCGAGAAGAAGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: AIKYHESILTVTHLS*HPLQWQSRLREEAL Trigger: AAGAGCTTCTTCTCGCAGGCGGGATTGCCATTGAAGAGGATGTCAAGAAAGATGAGTCACTGTTAGGATTGATTCATGATACTTTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS TCA 90 bp | CAAGTTGTCAGCTGGTTATTTGAACAAGTATTCCAGGGCTTTAGTTaGATTCAGGATGAAGTTTCCTCACATCACTTCACTTTTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: QVVSWLFEQVFQGFS*IQDEVSSHHFTFHL Trigger: GAGATGAAAAGTGAAGTGATGTGAGGAAACTTCATCCTGAATTCAACTAAAGCCCTGGAATACTTGTTCAAATAACCAGCTGACAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS GCA 90 bp | ACTGTGTTCCATGGATACCAGGATATAGATGACTCTATCAGCAAATaGAGCTTGGCAATAAAGTATCATGAATCAATCCTAACAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: TVFHGYQDIDDSISK*SLAIKYHESILTVT Trigger: AGTCACTGTTAGGATTGATTCATGATACTTTATTGCCAAGCTGCATTTGCTGATAGAGTCATCTATATCCTGGTATCCATGGAACACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS TCA 72 bp | GGGAGGCCTCAGGAAACTTACAATCATGGTGGAAGGTaGAGGAGAAGCAAGCACCTTCTTCACAAAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GRPQETYNHGGR*RRSKHLLHKVA Trigger: TGCCACTTTGTGAAGAAGGTGCTTGCTTCTCCTTCACCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000655716.1 ENST00000662117.1 |
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| CDS CCA 72 bp | CAGGCGTTGGAAAAATGTCACCTAGTTCCACATGGCTaGGGAGGCCTCAGGAAACTTACAATCATGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QALEKCHLVPHG*GGLRKLTIMVE Trigger: TTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTAGGTGACATTTTTCCAACGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505298.5 |
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| CDS CAA 90 bp | CCAGAGAATTTCATGTTTGGCTCCTTCTCATCATTCATTCAGGCGTaGGAAAAATGTCACCTAGTTCCACATGGCTGGGGAGGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PENFMFGSFSSFIQA*EKCHLVPHGWGGLR Trigger: CCTGAGGCCTCCCCAGCCATGTGGAACTAGGTGACATTTTTCCAACGCCTGAATGAATGATGAGAAGGAGCCAAACATGAAATTCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505298.5 |
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| CDS CCA 72 bp | CATTCAGGCGTTGGAAAAATGTCACCTAGTTCCACATaGCTGGGGAGGCCTCAGGAAACTTACAATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: HSGVGKMSPSST*LGRPQETYNHG Trigger: ACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTAGGTGACATTTTTCCAACGCCTGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505298.5 |
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| CDS CAA 72 bp | TTCATGTTTGGCTCCTTCTCATCATTCATTCAGGCGTaGGAAAAATGTCACCTAGTTCCACATGGCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FMFGSFSSFIQA*EKCHLVPHGWG Trigger: TCCCCAGCCATGTGGAACTAGGTGACATTTTTCCAACGCCTGAATGAATGATGAGAAGGAGCCAAACATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505298.5 |
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| CDS TCA 72 bp | TATCATGAATCAATCCTAACAGTGACTCATCTTTCTTaGCATCCTCTTCAATGGCAATCCCGCCTGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: YHESILTVTHLS*HPLQWQSRLRE Trigger: TTCTCGCAGGCGGGATTGCCATTGAAGAGGATGTCAAGAAAGATGAGTCACTGTTAGGATTGATTCATGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS TCA 72 bp | CCCTTCCACTGTGTTCCATGGATACCAGGATATAGATaGCTCTATCAGCAAATGCAGCTTGGCAATAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: PFHCVPWIPGYR*LYQQMQLGNKV Trigger: TACTTTATTGCCAAGCTGCATTTGCTGATAGAGTCATCTATATCCTGGTATCCATGGAACACAGTGGAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS CAA 72 bp | TCAAGACAGCTTAACCCCAAGTTGTCAGCTGGTTATTaGAACAAGTATTCCAGGGCTTTAGTTGAATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRQLNPKLSAGY*NKYSRALVEFR Trigger: CCTGAATTCAACTAAAGCCCTGGAATACTTGTTCAAATAACCAGCTGACAACTTGGGGTTAAGCTGTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS CAA 90 bp | TTGGCTGAGCTAAACAGGTTAAATTCAAGACAGCTTAACCCCAAGTaGTCAGCTGGTTATTTGAACAAGTATTCCAGGGCTTTAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LAELNRLNSRQLNPK*SAGYLNKYSRALVE Trigger: TTCAACTAAAGCCCTGGAATACTTGTTCAAATAACCAGCTGACAACTTGGGGTTAAGCTGTCTTGAATTTAACCTGTTTAGCTCAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS CAA 72 bp | CTAAACAGGTTAAATTCAAGACAGCTTAACCCCAAGTaGTCAGCTGGTTATTTGAACAAGTATTCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LNRLNSRQLNPK*SAGYLNKYSRA Trigger: AGCCCTGGAATACTTGTTCAAATAACCAGCTGACAACTTGGGGTTAAGCTGTCTTGAATTTAACCTGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS TCA 72 bp | AGCTGGTTATTTGAACAAGTATTCCAGGGCTTTAGTTaGATTCAGGATGAAGTTTCCTCACATCACTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SWLFEQVFQGFS*IQDEVSSHHFT Trigger: AGTGAAGTGATGTGAGGAAACTTCATCCTGAATTCAACTAAAGCCCTGGAATACTTGTTCAAATAACCAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS CAA 90 bp | AGGTTAAATTCAAGACAGCTTAACCCCAAGTTGTCAGCTGGTTATTaGAACAAGTATTCCAGGGCTTTAGTTGAATTCAGGATGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: RLNSRQLNPKLSAGY*NKYSRALVEFRMKF Trigger: AAACTTCATCCTGAATTCAACTAAAGCCCTGGAATACTTGTTCAAATAACCAGCTGACAACTTGGGGTTAAGCTGTCTTGAATTTAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505298.5 ENST00000510597.6 ENST00000662117.1 |
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| CDS CAA 90 bp | TTCCATGGATACCAGGATATAGATGACTCTATCAGCAAATGCAGCTaGGCAATAAAGTATCATGAATCAATCCTAACAGTGACTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: FHGYQDIDDSISKCS*AIKYHESILTVTHL Trigger: AAGATGAGTCACTGTTAGGATTGATTCATGATACTTTATTGCCAAGCTGCATTTGCTGATAGAGTCATCTATATCCTGGTATCCATGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS TCA 72 bp | CTCTATCAGCAAATGCAGCTTGGCAATAAAGTATCATaGATCAATCCTAACAGTGACTCATCTTTCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LYQQMQLGNKVS*INPNSDSSFLT Trigger: TGTCAAGAAAGATGAGTCACTGTTAGGATTGATTCATGATACTTTATTGCCAAGCTGCATTTGCTGATAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS GCA 72 bp | CATGGATACCAGGATATAGATGACTCTATCAGCAAATaGAGCTTGGCAATAAAGTATCATGAATCAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: HGYQDIDDSISK*SLAIKYHESIL Trigger: TAGGATTGATTCATGATACTTTATTGCCAAGCTGCATTTGCTGATAGAGTCATCTATATCCTGGTATCCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS CAA 72 bp | TACCAGGATATAGATGACTCTATCAGCAAATGCAGCTaGGCAATAAAGTATCATGAATCAATCCTAACAGTG | + |
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Preference number: 6 (lower is better) Translates to: YQDIDDSISKCS*AIKYHESILTV Trigger: CACTGTTAGGATTGATTCATGATACTTTATTGCCAAGCTGCATTTGCTGATAGAGTCATCTATATCCTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515128.2 ENST00000655716.1 |
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| CDS TCA 72 bp | TCTGGTGACAAATTTTCAGACCTGATAAAATGTTTGTaGGTCTTTCTTCATTACTGTGAAATGTACAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGDKFSDLIKCL*VFLHYCEMYKA Trigger: AGCCTTGTACATTTCACAGTAATGAAGAAAGACTCACAAACATTTTATCAGGTCTGAAAATTTGTCACCAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000510597.6 ENST00000662117.1 |
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