Pregenerated sensors for LINC02497 (Homo sapiens)
Ensembl gene IDs: ENSG00000251182Ensembl transcript IDs: ENST00000515292.2, ENST00000660077.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTCGAAGAGCATGACCGGCAAGTGGCTCCTGTCAGAAGGAGGCCTTaGTTTCTCACCCTGTGCATTTTTACAGTAGAGCTGCATAACGTG | + |
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Preference number: 5 (lower is better) Translates to: FEEHDRQVAPVRRRP*FLTLCIFTVELHNV Trigger: CACGTTATGCAGCTCTACTGTAAAAATGCACAGGGTGAGAAACCAAGGCCTCCTTCTGACAGGAGCCACTTGCCGGTCATGCTCTTCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515292.2 |
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| CDS GCA 72 bp | GCTCCTGTCAGAAGGAGGCCTTGGTTTCTCACCCTGTaGATTTTTACAGTAGAGCTGCATAACGTGGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: APVRRRPWFLTL*IFTVELHNVVV Trigger: AACTACCACGTTATGCAGCTCTACTGTAAAAATGCACAGGGTGAGAAACCAAGGCCTCCTTCTGACAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515292.2 |
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| CDS CAA 72 bp | AGAGCTGTTATTTTGTCAACACGTTACTTCAGTGGTTaGTTTGACATTCTTCTAGATGGACTCTCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RAVILSTRYFSG*FDILLDGLSLV Trigger: GACCAGAGAGAGTCCATCTAGAAGAATGTCAAACAAACCACTGAAGTAACGTGTTGACAAAATAACAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000515292.2 ENST00000660077.1 |
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| CDS CAA 90 bp | CAATTTATTAGAGCTGTTATTTTGTCAACACGTTACTTCAGTGGTTaGTTTGACATTCTTCTAGATGGACTCTCTCTGGTCCTGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: QFIRAVILSTRYFSG*FDILLDGLSLVLSI Trigger: AATTGACAGGACCAGAGAGAGTCCATCTAGAAGAATGTCAAACAAACCACTGAAGTAACGTGTTGACAAAATAACAGCTCTAATAAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000515292.2 ENST00000660077.1 |
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