Pregenerated sensors for LINC02492 (Homo sapiens)
Ensembl gene IDs: ENSG00000250590Ensembl transcript IDs: ENST00000502952.1, ENST00000507817.2, ENST00000514767.2, ENST00000515660.6, ENST00000653020.1, ENST00000654552.1, ENST00000654776.1, ENST00000656713.1, ENST00000656759.1, ENST00000657902.1, ENST00000658590.1, ENST00000659431.1, ENST00000663188.1, ENST00000664977.1, ENST00000665640.1, ENST00000667027.1, ENST00000667508.1, ENST00000667648.1, ENST00000668469.1, ENST00000669092.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTCTCCCGGGTCCTGCAGGAGCAGCCCACTTCCTTCAGAGGGTCTaGGGGTCCTCTCGGGACTGCTGGTTTCTTCCTGCAGTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: GLPGPAGAAHFLQRV*GSSRDCWFLPAVHL Trigger: CAGATGGACTGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACCCTCTGAAGGAAGTGGGCTGCTCCTGCAGGACCCGGGAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS GCA 90 bp | CCTTCAGAGGGTCTGCGGGTCCTCTCGGGACTGCTGGTTTCTTCCTaGAGTCCATCTGGAGCTAAAAGTCACAATGCGAGCCCCGCACGC | + |
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Preference number: 5 (lower is better) Translates to: PSEGLRVLSGLLVSS*SPSGAKSHNASPAR Trigger: GCGTGCGGGGCTCGCATTGTGACTTTTAGCTCCAGATGGACTGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACCCTCTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS CCA 90 bp | GCTCCTGCGGCTACAGACACAATGGAAAGAGGTAAGGTTTCCACATaGACAATCACGGCGGGTTTCCTGACAGAAGCAGGGTTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: APAATDTMERGKVST*TITAGFLTEAGFTE Trigger: TTCAGTGAACCCTGCTTCTGTCAGGAAACCCGCCGTGATTGTCCATGTGGAAACCTTACCTCTTTCCATTGTGTCTGTAGCCGCAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656713.1 |
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| CDS CCA 90 bp | TGTTGCAGAATCAATACTTCTGACACTTGTCACCAGCAGGAGATGTaGTCTAGCCATTCCTCACAGAGCAGGAAACCAGGGGCTGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CCRINTSDTCHQQEM*SSHSSQSRKPGAVA Trigger: TGCAACAGCCCCTGGTTTCCTGCTCTGTGAGGAATGGCTAGACCACATCTCCTGCTGGTGACAAGTGTCAGAAGTATTGATTCTGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507817.2 |
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| CDS TCA 90 bp | ATCACGGCGGGTTTCCTGACAGAAGCAGGGTTCACTGAAGGTGGGTaGCTGGGAGAAATACTTTGGTTTTTCCATACCTGTTCTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: ITAGFLTEAGFTEGG*LGEILWFFHTCSSL Trigger: TAGGGAAGAACAGGTATGGAAAAACCAAAGTATTTCTCCCAGTCACCCACCTTCAGTGAACCCTGCTTCTGTCAGGAAACCCGCCGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656713.1 |
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| CDS CCA 90 bp | TGGCTTTTAATAAATGTGTCTGACACTTGTCACCAGCAGGAGATGTaGTCTAGCCATTCCTCACAGAGCAGGAAACCAGGGGCTGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: WLLINVSDTCHQQEM*SSHSSQSRKPGAVA Trigger: TGCAACAGCCCCTGGTTTCCTGCTCTGTGAGGAATGGCTAGACCACATCTCCTGCTGGTGACAAGTGTCAGACACATTTATTAAAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667508.1 |
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| CDS GCA 90 bp | ATGCGTGAGTTGGTGCAATTAAGACTGCAACTTCTGATCCTGTCCTaGCTGGATCCATCCACCCTGGGAATGTCAACTTGTCTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: MRELVQLRLQLLILS*LDPSTLGMSTCLSF Trigger: AAAGGAAAGACAAGTTGACATTCCCAGGGTGGATGGATCCAGGCAGGACAGGATCAGAAGTTGCAGTCTTAATTGCACCAACTCACGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000667027.1 |
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| CDS GCA 90 bp | TTCTCAGCTCTCTGTTGTGAATCGCCAGGTTTCTTCTCAGTTTGTTaGAGAATCAATACTACTCGGCTGGTGACATGCGTGAGTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: FSALCCESPGFFSVC*RINTTRLVTCVSWC Trigger: GCACCAACTCACGCATGTCACCAGCCGAGTAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000658590.1 ENST00000667027.1 |
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| CDS GCA 90 bp | TTCTCAGCTCTCTGTTGTGAATCGCCAGGTTTCTTCTCAGTTTGTTaGAGAATCAATACTTCTGACACTTGTCACCAGCAGGAGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: FSALCCESPGFFSVC*RINTSDTCHQQEMW Trigger: CCACATCTCCTGCTGGTGACAAGTGTCAGAAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507817.2 |
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| CDS GCA 90 bp | ATGCGTGAGTTGGTGCAATTAAGACTGCAACTTCTGATCCTGTCCTaGCTGGATCCATCCACCCTGGGAAATTTATTCTGCTCATTGAAA | + |
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Preference number: 5 (lower is better) Translates to: MRELVQLRLQLLILS*LDPSTLGNLFCSLK Trigger: TTTCAATGAGCAGAATAAATTTCCCAGGGTGGATGGATCCAGGCAGGACAGGATCAGAAGTTGCAGTCTTAATTGCACCAACTCACGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658590.1 |
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| CDS CCA 90 bp | GGAATGTGCTTTTCTGCATCATTAGTGACTTCTGACTTCTCCGATTaGAACACACGTATGTTTGTTTCCTTTGCAGGCCTAATTGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GMCFSASLVTSDFSD*NTRMFVSFAGLIGK Trigger: CTTGCCAATTAGGCCTGCAAAGGAAACAAACATACGTGTGTTCCAATCGGAGAAGTCAGAAGTCACTAATGATGCAGAAAAGCACATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS TCA 90 bp | CCATTTAGCTGGAATCCAGACTTAGGATTTCTCAGCTCTCTGTTGTaGATCGCCAGGTTTCTTCTCAGTTTGTTGCAGAATCAATACTTC | + |
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Preference number: 5 (lower is better) Translates to: PFSWNPDLGFLSSLL*IARFLLSLLQNQYF Trigger: GAAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAAATCCTAAGTCTGGATTCCAGCTAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507817.2 |
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| CDS TCA 90 bp | CCATTTAGCTGGAATCCAGACTTAGGATTTCTCAGCTCTCTGTTGTaGATCGCCAGGTTTCTTCTCAGTTTGTTGCAGAATCAATACTTG | + |
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Preference number: 5 (lower is better) Translates to: PFSWNPDLGFLSSLL*IARFLLSLLQNQYL Trigger: CAAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAAATCCTAAGTCTGGATTCCAGCTAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000514767.2 ENST00000654552.1 ENST00000656759.1 ENST00000659431.1 ENST00000663188.1 ENST00000665640.1 ENST00000667648.1 ENST00000668469.1 |
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| CDS TCA 90 bp | CCATTTAGCTGGAATCCAGACTTAGGATTTCTCAGCTCTCTGTTGTaGATCGCCAGGTTTCTTCTCAGTTTGTTGCAGAATCAATACTAC | + |
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Preference number: 5 (lower is better) Translates to: PFSWNPDLGFLSSLL*IARFLLSLLQNQYY Trigger: GTAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAAATCCTAAGTCTGGATTCCAGCTAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000658590.1 ENST00000667027.1 |
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| CDS TCA 90 bp | ATTGCCAAAACTTGGAATGTGCTTTTCTGCATCATTAGTGACTTCTaGCTTCTCCGATTGGAACACACGTATGTTTGTTTCCTTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: IAKTWNVLFCIISDF*LLRLEHTYVCFLCR Trigger: CCTGCAAAGGAAACAAACATACGTGTGTTCCAATCGGAGAAGTCAGAAGTCACTAATGATGCAGAAAAGCACATTCCAAGTTTTGGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS TCA 90 bp | CCATTTAGCTGGAATCCAGACTTAGGATTTCTCAGCTCTCTGTTGTaGATCGCCAGGTTTCTTCTCAGTTTGTTGCAGAATCAATACTAT | + |
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Preference number: 5 (lower is better) Translates to: PFSWNPDLGFLSSLL*IARFLLSLLQNQYY Trigger: ATAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAAATCCTAAGTCTGGATTCCAGCTAAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS GCA 90 bp | CCCTCACAAAAGCAACGTATTCTGATTTCTTCACTGTTGGATTCATaGCATCTGGAAGAACAACATTTACAATTTCTCCTTTGTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: PSQKQRILISSLLDS*HLEEQHLQFLLCGV Trigger: CACTCCACAAAGGAGAAATTGTAAATGTTGTTCTTCCAGATGGCATGAATCCAACAGTGAAGAAATCAGAATACGTTGCTTTTGTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000654776.1 ENST00000656759.1 ENST00000658590.1 ENST00000659431.1 ENST00000667648.1 |
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| CDS CCA 90 bp | TCTTTCGCTGGGAGGTTTTACATAACAACTCTGCTCCATTCTGTCTaGGATGTGAATCATCTTTTTGTCCAACATATCCATGCTGTATAT | + |
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Preference number: 5 (lower is better) Translates to: SFAGRFYITTLLHSV*DVNHLFVQHIHAVY Trigger: ATATACAGCATGGATATGTTGGACAAAAAGATGATTCACATCCCAGACAGAATGGAGCAGAGTTGTTATGTAAAACCTCCCAGCGAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656713.1 ENST00000663188.1 |
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| CDS CCA 90 bp | TCAAATTTCAGTTTCTCTTCAAGCTTTCTGGACTATTTCTTTCGCTaGGAGGTTTTACATAACAACTCTGCTCCATTCTGTCTGGGATGT | + |
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Preference number: 5 (lower is better) Translates to: SNFSFSSSFLDYFFR*EVLHNNSAPFCLGC Trigger: ACATCCCAGACAGAATGGAGCAGAGTTGTTATGTAAAACCTCCCAGCGAAAGAAATAGTCCAGAAAGCTTGAAGAGAAACTGAAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656713.1 ENST00000663188.1 |
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| CDS CCA 90 bp | TCAAATTTCAGTTTCTCTTCAAGCTTTCTGGACTATTTCTTTCGCTaGGAGGTTTTACATAACAACTCATTTACAATTTCTCCTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SNFSFSSSFLDYFFR*EVLHNNSFTISPLW Trigger: CCACAAAGGAGAAATTGTAAATGAGTTGTTATGTAAAACCTCCCAGCGAAAGAAATAGTCCAGAAAGCTTGAAGAGAAACTGAAATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000502952.1 ENST00000653020.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS GCA 72 bp | GGTCCTGCAGGAGCAGCCCACTTCCTTCAGAGGGTCTaGGGGTCCTCTCGGGACTGCTGGTTTCTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GPAGAAHFLQRV*GSSRDCWFLPA Trigger: TGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACCCTCTGAAGGAAGTGGGCTGCTCCTGCAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS GCA 72 bp | GTTGCATTCAGACTTTTGCGGGGGTCTCCCGGGTCCTaGAGGAGCAGCCCACTTCCTTCAGAGGGTCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: VAFRLLRGSPGS*RSSPLPSEGLR Trigger: CCGCAGACCCTCTGAAGGAAGTGGGCTGCTCCTGCAGGACCCGGGAGACCCCCGCAAAAGTCTGAATGCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS CAA 72 bp | CAGAGCAGGAAACCAGGGGCTGTTGCATTCAGACTTTaGCGGGGGTCTCCCGGGTCCTGCAGGAGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QSRKPGAVAFRL*RGSPGSCRSSP Trigger: TGGGCTGCTCCTGCAGGACCCGGGAGACCCCCGCAAAAGTCTGAATGCAACAGCCCCTGGTTTCCTGCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS CAA 90 bp | CATTCCTCACAGAGCAGGAAACCAGGGGCTGTTGCATTCAGACTTTaGCGGGGGTCTCCCGGGTCCTGCAGGAGCAGCCCACTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSSQSRKPGAVAFRL*RGSPGSCRSSPLPS Trigger: TGAAGGAAGTGGGCTGCTCCTGCAGGACCCGGGAGACCCCCGCAAAAGTCTGAATGCAACAGCCCCTGGTTTCCTGCTCTGTGAGGAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS GCA 72 bp | GGTCTGCGGGTCCTCTCGGGACTGCTGGTTTCTTCCTaGAGTCCATCTGGAGCTAAAAGTCACAATGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GLRVLSGLLVSS*SPSGAKSHNAS Trigger: GCTCGCATTGTGACTTTTAGCTCCAGATGGACTGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS GCA 72 bp | CACTTCCTTCAGAGGGTCTGCGGGTCCTCTCGGGACTaGTGGTTTCTTCCTGCAGTCCATCTGGAGCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: HFLQRVCGSSRD*WFLPAVHLELK Trigger: TTTTAGCTCCAGATGGACTGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACCCTCTGAAGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS CCA 72 bp | TTCCTTCAGAGGGTCTGCGGGTCCTCTCGGGACTGCTaGTTTCTTCCTGCAGTCCATCTGGAGCTAAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLQRVCGSSRDC*FLPAVHLELKV Trigger: GACTTTTAGCTCCAGATGGACTGCAGGAAGAAACCAGCAGTCCCGAGAGGACCCGCAGACCCTCTGAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507817.2 ENST00000667508.1 |
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| CDS CAA 72 bp | AAAGGGGATCATGAGTTAACCAGACATGAGCCATGCTaGGGAAGCTGTTACTGCTCCTGCGGCTACAGACAC | + |
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Preference number: 6 (lower is better) Translates to: KGDHELTRHEPC*GSCYCSCGYRH Trigger: GTGTCTGTAGCCGCAGGAGCAGTAACAGCTTCCCAAGCATGGCTCATGTCTGGTTAACTCATGATCCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656713.1 |
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| CDS CCA 72 bp | ATCAATACTTCTGACACTTGTCACCAGCAGGAGATGTaGTCTAGCCATTCCTCACAGAGCAGGAAACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: INTSDTCHQQEM*SSHSSQSRKPG Trigger: CCCTGGTTTCCTGCTCTGTGAGGAATGGCTAGACCACATCTCCTGCTGGTGACAAGTGTCAGAAGTATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507817.2 |
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| CDS CCA 72 bp | ATAAATGTGTCTGACACTTGTCACCAGCAGGAGATGTaGTCTAGCCATTCCTCACAGAGCAGGAAACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: INVSDTCHQQEM*SSHSSQSRKPG Trigger: CCCTGGTTTCCTGCTCTGTGAGGAATGGCTAGACCACATCTCCTGCTGGTGACAAGTGTCAGACACATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667508.1 |
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| CDS CCA 72 bp | TGGCCTGCTCCTGACATCCAACCAGTAACATTATCATaGCTCAAAGATCAGGAACACCCACAGCAGATGATC | + |
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Preference number: 6 (lower is better) Translates to: WPAPDIQPVTLS*LKDQEHPQQMI Trigger: GATCATCTGCTGTGGGTGTTCCTGATCTTTGAGCCATGATAATGTTACTGGTTGGATGTCAGGAGCAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000514767.2 ENST00000515660.6 ENST00000653020.1 ENST00000654552.1 ENST00000656713.1 ENST00000656759.1 ENST00000657902.1 ENST00000659431.1 ENST00000664977.1 ENST00000667027.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS CAA 90 bp | AGTTTGTTGCAGAATCAATACTACTCGGCTGGTGACATGCGTGAGTaGGTGCAATTAAGACTGCAACTTCTGATCCTGTCCTGCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLLQNQYYSAGDMRE*VQLRLQLLILSCLD Trigger: ATCCAGGCAGGACAGGATCAGAAGTTGCAGTCTTAATTGCACCAACTCACGCATGTCACCAGCCGAGTAGTATTGATTCTGCAACAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000658590.1 ENST00000667027.1 |
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| CDS TCA 72 bp | GGTTTCCTGACAGAAGCAGGGTTCACTGAAGGTGGGTaGCTGGGAGAAATACTTTGGTTTTTCCATACCTGT | + |
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Preference number: 6 (lower is better) Translates to: GFLTEAGFTEGG*LGEILWFFHTC Trigger: ACAGGTATGGAAAAACCAAAGTATTTCTCCCAGTCACCCACCTTCAGTGAACCCTGCTTCTGTCAGGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656713.1 |
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| CDS GCA 72 bp | CTCTGTTGTGAATCGCCAGGTTTCTTCTCAGTTTGTTaGAGAATCAATACTACTCGGCTGGTGACATGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LCCESPGFFSVC*RINTTRLVTCV Trigger: CACGCATGTCACCAGCCGAGTAGTATTGATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000658590.1 ENST00000667027.1 |
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| CDS CAA 72 bp | CAGAATCAATACTACTCGGCTGGTGACATGCGTGAGTaGGTGCAATTAAGACTGCAACTTCTGATCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QNQYYSAGDMRE*VQLRLQLLILS Trigger: GGACAGGATCAGAAGTTGCAGTCTTAATTGCACCAACTCACGCATGTCACCAGCCGAGTAGTATTGATTCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000653020.1 ENST00000654776.1 ENST00000657902.1 ENST00000658590.1 ENST00000667027.1 |
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| CDS CCA 72 bp | GAACACACGTATGTTTGTTTCCTTTGCAGGCCTAATTaGCAAGACTGCAGATACCTGTCAACTTGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: EHTYVCFLCRPN*QDCRYLSTCLS Trigger: GGAAAGACAAGTTGACAGGTATCTGCAGTCTTGCCAATTAGGCCTGCAAAGGAAACAAACATACGTGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS TCA 72 bp | TGGAATCCAGACTTAGGATTTCTCAGCTCTCTGTTGTaGATCGCCAGGTTTCTTCTCAGTTTGTTGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: WNPDLGFLSSLL*IARFLLSLLQN Trigger: ATTCTGCAACAAACTGAGAAGAAACCTGGCGATTCACAACAGAGAGCTGAGAAATCCTAAGTCTGGATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000507817.2 ENST00000514767.2 ENST00000515660.6 ENST00000653020.1 ENST00000654552.1 ENST00000654776.1 ENST00000656759.1 ENST00000657902.1 ENST00000658590.1 ENST00000659431.1 ENST00000663188.1 ENST00000664977.1 ENST00000665640.1 ENST00000667027.1 ENST00000667648.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS GCA 72 bp | AAGCAACGTATTCTGATTTCTTCACTGTTGGATTCATaGCATCTGGAAGAACAACTGCTCCATTCTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KQRILISSLLDS*HLEEQLLHSVW Trigger: CCAGACAGAATGGAGCAGTTGTTCTTCCAGATGGCATGAATCCAACAGTGAAGAAATCAGAATACGTTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514767.2 ENST00000664977.1 |
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| CDS CCA 72 bp | TCATGCCATCTGGAAGAACAACTGCTCCATTCTGTCTaGGATGTGAATCATCTTTTTGTCCAACATATCCAT | + |
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Preference number: 6 (lower is better) Translates to: SCHLEEQLLHSV*DVNHLFVQHIH Trigger: ATGGATATGTTGGACAAAAAGATGATTCACATCCCAGACAGAATGGAGCAGTTGTTCTTCCAGATGGCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000514767.2 ENST00000664977.1 |
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| CDS CCA 72 bp | TTTTCTGCATCATTAGTGACTTCTGACTTCTCCGATTaGAACACACGTATGTTTGTTTCCTTTGCAGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: FSASLVTSDFSD*NTRMFVSFAGL Trigger: TAGGCCTGCAAAGGAAACAAACATACGTGTGTTCCAATCGGAGAAGTCAGAAGTCACTAATGATGCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS TCA 72 bp | GATATTCATCTTTTAATCATCCACATGGCCTGCTCCTaGCATCCAACCAGTAACATTATCATGGCTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: DIHLLIIHMACS*HPTSNIIMAQR Trigger: TCTTTGAGCCATGATAATGTTACTGGTTGGATGTCAGGAGCAGGCCATGTGGATGATTAAAAGATGAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000514767.2 ENST00000515660.6 ENST00000653020.1 ENST00000654552.1 ENST00000654776.1 ENST00000656713.1 ENST00000656759.1 ENST00000657902.1 ENST00000659431.1 ENST00000664977.1 ENST00000665640.1 ENST00000667027.1 ENST00000667648.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS TCA 72 bp | ATCTGGAAGAACAACTGCTCCATTCTGTCTGGGATGTaGATCATCTTTTTGTCCAACATATCCATGCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: IWKNNCSILSGM*IIFLSNISMLY Trigger: ATACAGCATGGATATGTTGGACAAAAAGATGATTCACATCCCAGACAGAATGGAGCAGTTGTTCTTCCAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000514767.2 ENST00000664977.1 |
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| CDS TCA 72 bp | ACTTGGAATGTGCTTTTCTGCATCATTAGTGACTTCTaGCTTCTCCGATTGGAACACACGTATGTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TWNVLFCIISDF*LLRLEHTYVCF Trigger: GAAACAAACATACGTGTGTTCCAATCGGAGAAGTCAGAAGTCACTAATGATGCAGAAAAGCACATTCCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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| CDS CCA 72 bp | GGGAGGTTTTACATAACAACTCTGCTCCATTCTGTCTaGGATGTGAATCATCTTTTTGTCCAACATATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRFYITTLLHSV*DVNHLFVQHIH Trigger: ATGGATATGTTGGACAAAAAGATGATTCACATCCCAGACAGAATGGAGCAGAGTTGTTATGTAAAACCTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656713.1 ENST00000663188.1 |
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| CDS CCA 72 bp | TTCTGGCTTTTAATAAATGTGCTGCTCCATTCTGTCTaGGATGTGAATCATCTTTTTGTCCAACATATCCAT | + |
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Preference number: 6 (lower is better) Translates to: FWLLINVLLHSV*DVNHLFVQHIH Trigger: ATGGATATGTTGGACAAAAAGATGATTCACATCCCAGACAGAATGGAGCAGCACATTTATTAAAAGCCAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000653020.1 ENST00000654552.1 ENST00000654776.1 ENST00000656759.1 ENST00000657902.1 ENST00000658590.1 ENST00000659431.1 ENST00000665640.1 ENST00000667027.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS GCA 72 bp | AAGCAACGTATTCTGATTTCTTCACTGTTGGATTCATaGCATCTGGAAGAACAACATTTACAATTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: KQRILISSLLDS*HLEEQHLQFLL Trigger: AAGGAGAAATTGTAAATGTTGTTCTTCCAGATGGCATGAATCCAACAGTGAAGAAATCAGAATACGTTGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515660.6 ENST00000654776.1 ENST00000656759.1 ENST00000658590.1 ENST00000659431.1 ENST00000667648.1 |
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| CDS TCA 72 bp | AAAGGTGATAATATTTTGTTTAGTTGCGGTTCAAAGTaGGTGTTCTCTCTTGTCAACCCAGTTTTAACATTC | + |
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Preference number: 6 (lower is better) Translates to: KGDNILFSCGSK*VFSLVNPVLTF Trigger: GAATGTTAAAACTGGGTTGACAAGAGAGAACACTCACTTTGAACCGCAACTAAACAAAATATTATCACCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 17 transcripts: ENST00000507817.2 ENST00000514767.2 ENST00000515660.6 ENST00000653020.1 ENST00000654552.1 ENST00000654776.1 ENST00000656759.1 ENST00000657902.1 ENST00000658590.1 ENST00000659431.1 ENST00000663188.1 ENST00000664977.1 ENST00000665640.1 ENST00000667027.1 ENST00000667648.1 ENST00000668469.1 ENST00000669092.1 |
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| CDS TCA 72 bp | TATAGTGGCAAAAAGATAATAAAGAGCTTTGCAGCCTaGTCCCAAATAGTTCCTTCATCTTTTTGGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: YSGKKIIKSFAA*SQIVPSSFWTF Trigger: AAAAGTCCAAAAAGATGAAGGAACTATTTGGGATCAGGCTGCAAAGCTCTTTATTATCTTTTTGCCACTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000664977.1 ENST00000669092.1 |
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