Pregenerated sensors for LINC02489 (Homo sapiens)
Ensembl gene IDs: ENSG00000255007Ensembl transcript IDs: ENST00000527239.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TATCCACACTCCGGAAAAGCTCAGCCTGGCAGGAGCCTCTCTCTCTaGCTGATCCTCAGTGTCTGGAACAGGCAAGAAGCTTATCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: YPHSGKAQPGRSLSL*LILSVWNRQEAYLC Trigger: ACAGAGATAAGCTTCTTGCCTGTTCCAGACACTGAGGATCAGGCAGAGAGAGAGGCTCCTGCCAGGCTGAGCTTTTCCGGAGTGTGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS GCA 90 bp | GTCCTCTTTCTCCTGTGCGTCATTGACTGCGTTGGGATGCCTTTATaGATGAAGCTTTTGCTTCACAGTTGGAACAGCTCATGGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: VLFLLCVIDCVGMPL*MKLLLHSWNSSWRA Trigger: TGCTCTCCATGAGCTGTTCCAACTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS TCA 90 bp | TCTTTCTCCTGTGCGTCATTGACTGCGTTGGGATGCCTTTATGCATaGAGCTTTTGCTTCACAGTTGGAACAGCTCATGGAGAGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SFSCASLTALGCLYA*SFCFTVGTAHGEQQ Trigger: TTGCTGCTCTCCATGAGCTGTTCCAACTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS GCA 90 bp | GTGTCTGGAACAGGCAAGAAGCTTATCTCTGTCCTCTTTCTCCTGTaGGTCATTGACTGCGTTGGGATGCCTTTATGCATGAAGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSGTGKKLISVLFLL*VIDCVGMPLCMKLL Trigger: CAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGGACAGAGATAAGCTTCTTGCCTGTTCCAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS TCA 90 bp | AACAGGCAAGAAGCTTATCTCTGTCCTCTTTCTCCTGTGCGTCATTaGCTGCGTTGGGATGCCTTTATGCATGAAGCTTTTGCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: NRQEAYLCPLSPVRH*LRWDAFMHEAFASQ Trigger: CTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGGACAGAGATAAGCTTCTTGCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS GCA 72 bp | ACAGGCAAGAAGCTTATCTCTGTCCTCTTTCTCCTGTaGGTCATTGACTGCGTTGGGATGCCTTTATGCATG | + |
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Preference number: 6 (lower is better) Translates to: TGKKLISVLFLL*VIDCVGMPLCM Trigger: CATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGGACAGAGATAAGCTTCTTGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS TCA 72 bp | TGTGCGTCATTGACTGCGTTGGGATGCCTTTATGCATaGAGCTTTTGCTTCACAGTTGGAACAGCTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: CASLTALGCLYA*SFCFTVGTAHG Trigger: TCCATGAGCTGTTCCAACTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS CAA 72 bp | ATTGACTGCGTTGGGATGCCTTTATGCATGAAGCTTTaGCTTCACAGTTGGAACAGCTCATGGAGAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: IDCVGMPLCMKL*LHSWNSSWRAA Trigger: TGCTGCTCTCCATGAGCTGTTCCAACTGTGAAGCAAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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| CDS TCA 72 bp | GAAGCTTATCTCTGTCCTCTTTCTCCTGTGCGTCATTaGCTGCGTTGGGATGCCTTTATGCATGAAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: EAYLCPLSPVRH*LRWDAFMHEAF Trigger: AAAAGCTTCATGCATAAAGGCATCCCAACGCAGTCAATGACGCACAGGAGAAAGAGGACAGAGATAAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527239.1 |
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