Pregenerated sensors for LINC02487 (Homo sapiens)
Ensembl gene IDs: ENSG00000203688Ensembl transcript IDs: ENST00000400831.2, ENST00000644320.2, ENST00000654811.1, ENST00000667387.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCATCCACACACCAGTCTGGAGCCCTCCCAGCCACGGAACTGCCTaGCACTTGGATGTGGGGGTTCCTGCGTCCCAGCCTCACAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: AIHTPVWSPPSHGTA*HLDVGVPASQPHKN Trigger: GTTCTTGTGAGGCTGGGACGCAGGAACCCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGCTCCAGACTGGTGTGTGGATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 90 bp | CCAGGAGCCTGGGAGGAGGTGACGCTGAGCACAGACACCACATCCTaGAGCCGTCCTTGGTCCCGTCTCAGCAGGCATTCCCAACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PGAWEEVTLSTDTTS*SRPWSRLSRHSQQR Trigger: TCTCTGTTGGGAATGCCTGCTGAGACGGGACCAAGGACGGCTGCAGGATGTGGTGTCTGTGCTCAGCGTCACCTCCTCCCAGGCTCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CCA 90 bp | GAGGAGGTGACGCTGAGCACAGACACCACATCCTGCAGCCGTCCTTaGTCCCGTCTCAGCAGGCATTCCCAACAGAGACCCCACCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: EEVTLSTDTTSCSRP*SRLSRHSQQRPHRE Trigger: CTCTCGGTGGGGTCTCTGTTGGGAATGCCTGCTGAGACGGGACCAAGGACGGCTGCAGGATGTGGTGTCTGTGCTCAGCGTCACCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CCA 90 bp | CAGCCATGTGAGGACACAGCAGAAGGTGCCATCCACACACCAGTCTaGAGCCCTCCCAGCCACGGAACTGCCTGGCACTTGGATGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: QPCEDTAEGAIHTPV*SPPSHGTAWHLDVG Trigger: CCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGCTCCAGACTGGTGTGTGGATGGCACCTTCTGCTGTGTCCTCACATGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 90 bp | CCAGGCACTGAAGGTTCGGATGCAAGCACTCTCCAGCGTAGGGGCTaGCCAAGTGAAATGCACACTGAGCAACCGTGCAGCTCCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PGTEGSDASTLQRRG*PSEMHTEQPCSSRS Trigger: GGACCTGGAGCTGCACGGTTGCTCAGTGTGCATTTCACTTGGTCAGCCCCTACGCTGGAGAGTGCTTGCATCCGAACCTTCAGTGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS GCA 90 bp | GTTCGGATGCAAGCACTCTCCAGCGTAGGGGCTGACCAAGTGAAATaGACACTGAGCAACCGTGCAGCTCCAGGTCCTGGCGGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VRMQALSSVGADQVK*TLSNRAAPGPGGSS Trigger: TGAAGAGCCGCCAGGACCTGGAGCTGCACGGTTGCTCAGTGTGCATTTCACTTGGTCAGCCCCTACGCTGGAGAGTGCTTGCATCCGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CCA 90 bp | GAGCTTTCTGGGCCTCATCACAGATTCGGCAGTGGCAGATCTGACTaGGAACCAGCGAAATCATTGCCCCGGGGTTTCTCACTCAGACGG | + |
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Preference number: 5 (lower is better) Translates to: ELSGPHHRFGSGRSD*EPAKSLPRGFSLRR Trigger: CCGTCTGAGTGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGCCGAATCTGTGATGAGGCCCAGAAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 90 bp | TCGGATGTGTCTAGCAGAGTGCCAAAGTCAGGCTGGAGTGTGCCCTaGAAGTCAGGGCCTTCTGAGGGACACAGACACGGTTTGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SDVSSRVPKSGWSVP*KSGPSEGHRHGLSP Trigger: TGGAGACAAACCGTGTCTGTGTCCCTCAGAAGGCCCTGACTTTCAGGGCACACTCCAGCCTGACTTTGGCACTCTGCTAGACACATCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 90 bp | TCAGGAGCTTTCTGGGCCTCATCACAGATTCGGCAGTGGCAGATCTaGCTGGGAACCAGCGAAATCATTGCCCCGGGGTTTCTCACTCAG | + |
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Preference number: 5 (lower is better) Translates to: SGAFWASSQIRQWQI*LGTSEIIAPGFLTQ Trigger: CTGAGTGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGCCGAATCTGTGATGAGGCCCAGAAAGCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 90 bp | GGGGCTGTGTGTAAGGCAAATGCTGAGGCCTACAACCATGTGTTCTaGGACGGTGGCCATTACAGAAACAGGCAGTCCCCAGACAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GAVCKANAEAYNHVF*DGGHYRNRQSPDRS Trigger: GCTTCTGTCTGGGGACTGCCTGTTTCTGTAATGGCCACCGTCTCAGAACACATGGTTGTAGGCCTCAGCATTTGCCTTACACACAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 90 bp | GCTCTGATGGGAGTCAACTCCATCACTTGTGGAGCGCTGCTGAAATaGCAACTGTGGAAGAGTTTCCAGGTGAGACCGCCGTGGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ALMGVNSITCGALLK*QLWKSFQVRPPWSP Trigger: AGGAGACCACGGCGGTCTCACCTGGAAACTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCCCATCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 90 bp | CAGACTTCAACACGAGAACCAGCGTTTCGGATGTGTCTAGCAGAGTaGCAAAGTCAGGCTGGAGTGTGCCCTGAAAGTCAGGGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QTSTREPAFRMCLAE*QSQAGVCPESQGLL Trigger: CAGAAGGCCCTGACTTTCAGGGCACACTCCAGCCTGACTTTGGCACTCTGCTAGACACATCCGAAACGCTGGTTCTCGTGTTGAAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CCA 90 bp | GCTGCTGGGAAGGCAAGGAGATGTGGGTCATCGTCATCAGCTAAATaGAGGGTGGCATTCTGCTTCTACCATCCAGCCAGTGCCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: AAGKARRCGSSSSAK*RVAFCFYHPASATD Trigger: ATCTGTGGCACTGGCTGGATGGTAGAAGCAGAATGCCACCCTCCATTTAGCTGATGACGATGACCCACATCTCCTTGCCTTCCCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667387.1 |
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| CDS TCA 90 bp | TCACAGCAGCCTCTTCACACCAGCCTCTCATCTTCATACCTTCTCTaGGGGTCTTGCTCATGGTGGCTTTGTCAGGAGATGCTCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQQPLHTSLSSSYLL*GSCSWWLCQEMLRC Trigger: GCACCTGAGCATCTCCTGACAAAGCCACCATGAGCAAGACCCTCAGAGAAGGTATGAAGATGAGAGGCTGGTGTGAAGAGGCTGCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 90 bp | ATTAGTGCCCTGATAAGAACAGAGATGACCCATCTCTCAGCCATGTaGGGACACAGCAGAAGGTGCCATCCACACACCAGTCTGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: ISALIRTEMTHLSAM*GHSRRCHPHTSLEP Trigger: GGGCTCCAGACTGGTGTGTGGATGGCACCTTCTGCTGTGTCCTCACATGGCTGAGAGATGGGTCATCTCTGTTCTTATCAGGGCACTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 90 bp | AGGCAGGGACCCACACTGAACAATCTGGACAAAGCTAATGCAGAATaGACAGTACCGCCGCTACCCAGCGACAGTCGGGCTGATGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: RQGPTLNNLDKANAE*TVPPLPSDSRADVL Trigger: TAGAACATCAGCCCGACTGTCGCTGGGTAGCGGCGGTACTGTTCATTCTGCATTAGCTTTGTCCAGATTGTTCAGTGTGGGTCCCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 90 bp | TGTCCCCACTCTTGTGTGCAGTTCAAAGACTTCACACTTGACAACTaGGAGTCCACCAAAGGGAGAAGTCGGACCAGCCCCCAGCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: CPHSCVQFKDFTLDN*ESTKGRSRTSPQPN Trigger: GTTTGGCTGGGGGCTGGTCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGAGTGGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 90 bp | ACAAGAGCACTTTGTTTCCTGTTTGCTAAGGAGGTCAAGGTCCCCTaGCCGTCTGCGTGTGGGTTTCCCTGTCTCAGACAACTGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: TRALCFLFAKEVKVP*PSACGFPCLRQLCC Trigger: ACAGCACAGTTGTCTGAGACAGGGAAACCCACACGCAGACGGCCAGGGGACCTTGACCTCCTTAGCAAACAGGAAACAAAGTGCTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 90 bp | GAAACGTTGTCCCCACTCTTGTGTGCAGTTCAAAGACTTCACACTTaGCAACTGAGAGTCCACCAAAGGGAGAAGTCGGACCAGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: ETLSPLLCAVQRLHT*QLRVHQREKSDQPP Trigger: TGGGGGCTGGTCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGAGTGGGGACAACGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 90 bp | GTTCATGTCCAGGAGGGCTCTGATGGGAGTCAACTCCATCACTTGTaGAGCGCTGCTGAAATGACAACTGTGGAAGAGTTTCCAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: VHVQEGSDGSQLHHL*SAAEMTTVEEFPGE Trigger: CTCACCTGGAAACTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCCCATCAGAGCCCTCCTGGACATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 90 bp | GGAAGGCAAGGAGATGTGGGTCATCGTCATCAGCTAAATGGAGGGTaGCATTCTGCTTCTACCATCCAGCCAGTGCCACAGATCAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GRQGDVGHRHQLNGG*HSASTIQPVPQIKE Trigger: CTCTTTGATCTGTGGCACTGGCTGGATGGTAGAAGCAGAATGCCACCCTCCATTTAGCTGATGACGATGACCCACATCTCCTTGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667387.1 |
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| CDS GCA 90 bp | AGATCCAAGCCCGAGTCCCCTCCCTTCGGTGTTGAACATCCACACTaGGCTGGAATGTGGTCAGCAGCGTTCACAGTTGTATCTTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: RSKPESPPFGVEHPH*AGMWSAAFTVVSLN Trigger: ATTTAAAGATACAACTGTGAACGCTGCTGACCACATTCCAGCGCAGTGTGGATGTTCAACACCGAAGGGAGGGGACTCGGGCTTGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 90 bp | TCCACTCAGTGTGCACATGAGTGGCTCCTGTCAGCGGGAGCTCCATaGGAAGCTTCTAAATACGGAAAAAGTGGAAATGGCATGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: STQCAHEWLLSAGAP*EASKYGKSGNGMLP Trigger: TGGCAACATGCCATTTCCACTTTTTCCGTATTTAGAAGCTTCCCATGGAGCTCCCGCTGACAGGAGCCACTCATGTGCACACTGAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 90 bp | AAGGGCAATCTCAAGGAATCAAGATCTGTAGGCAGGGACCCACACTaGACAATCTGGACAAAGCTAATGCAGAATGAACAGTACCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KGNLKESRSVGRDPH*TIWTKLMQNEQYRR Trigger: GCGGCGGTACTGTTCATTCTGCATTAGCTTTGTCCAGATTGTTCAGTGTGGGTCCCTGCCTACAGATCTTGATTCCTTGAGATTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 90 bp | AGATGTACAATTGGGATGTGTTCGCACAGCCGCTTCATTCCGGCCTaGGAACAAGAGCACTTTGTTTCCTGTTTGCTAAGGAGGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RCTIGMCSHSRFIPA*EQEHFVSCLLRRSR Trigger: CCTTGACCTCCTTAGCAAACAGGAAACAAAGTGCTCTTGTTCTCAGGCCGGAATGAAGCGGCTGTGCGAACACATCCCAATTGTACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 90 bp | TTCCAAATGGAGGAAGTCAAGGGTATGCAGGCGCTCCAGTTTCCCTaGCTTACCCTACATATCCATAACAGACTTCAACACGAGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: FQMEEVKGMQALQFP*LTLHIHNRLQHENQ Trigger: CTGGTTCTCGTGTTGAAGTCTGTTATGGATATGTAGGGTAAGGCAGGGAAACTGGAGCGCCTGCATACCCTTGACTTCCTCCATTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS GCA 90 bp | CCATGTCTCAGGGTTATCTTTTCCAAATGGAGGAAGTCAAGGGTATaGAGGCGCTCCAGTTTCCCTGCCTTACCCTACATATCCATAACA | + |
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Preference number: 5 (lower is better) Translates to: PCLRVIFSKWRKSRV*RRSSFPALPYISIT Trigger: TGTTATGGATATGTAGGGTAAGGCAGGGAAACTGGAGCGCCTGCATACCCTTGACTTCCTCCATTTGGAAAAGATAACCCTGAGACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 90 bp | AGTGATCCTTGTGGCAGAAATCCAAACTGTGGGGGTAAAGGAACATaGAAGCAACAATTTCCCCTTATGTCCTGCCCGATGCTATATAGT | + |
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Preference number: 5 (lower is better) Translates to: SDPCGRNPNCGGKGT*KQQFPLMSCPMLYS Trigger: ACTATATAGCATCGGGCAGGACATAAGGGGAAATTGTTGCTTTCATGTTCCTTTACCCCCACAGTTTGGATTTCTGCCACAAGGATCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 72 bp | CCACACACCAGTCTGGAGCCCTCCCAGCCACGGAACTaGCTGGCACTTGGATGTGGGGGTTCCTGCGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PHTSLEPSQPRN*LALGCGGSCVP Trigger: TGGGACGCAGGAACCCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGCTCCAGACTGGTGTGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CAA 72 bp | GTCTGGAGCCCTCCCAGCCACGGAACTGCCTGGCACTaGGATGTGGGGGTTCCTGCGTCCCAGCCTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: VWSPPSHGTAWH*DVGVPASQPHK Trigger: CTTGTGAGGCTGGGACGCAGGAACCCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGCTCCAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CCA 72 bp | GCCCTCCCAGCCACGGAACTGCCTGGCACTTGGATGTaGGGGTTCCTGCGTCCCAGCCTCACAAGAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ALPATELPGTWM*GFLRPSLTRTV Trigger: CACAGTTCTTGTGAGGCTGGGACGCAGGAACCCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CCA 72 bp | TCTGGAGCCCTCCCAGCCACGGAACTGCCTGGCACTTaGATGTGGGGGTTCCTGCGTCCCAGCCTCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: SGALPATELPGT*MWGFLRPSLTR Trigger: TCTTGTGAGGCTGGGACGCAGGAACCCCCACATCCAAGTGCCAGGCAGTTCCGTGGCTGGGAGGGCTCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CAA 90 bp | GGAGGAGGTGACGCTGAGCACAGACACCACATCCTGCAGCCGTCCTaGGTCCCGTCTCAGCAGGCATTCCCAACAGAGACCCCACCGAGA | + |
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Preference number: 6 (lower is better) Translates to: GGGDAEHRHHILQPS*VPSQQAFPTETPPR Trigger: TCTCGGTGGGGTCTCTGTTGGGAATGCCTGCTGAGACGGGACCAAGGACGGCTGCAGGATGTGGTGTCTGTGCTCAGCGTCACCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 72 bp | TGGGAGGAGGTGACGCTGAGCACAGACACCACATCCTaGAGCCGTCCTTGGTCCCGTCTCAGCAGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: WEEVTLSTDTTS*SRPWSRLSRHS Trigger: GGAATGCCTGCTGAGACGGGACCAAGGACGGCTGCAGGATGTGGTGTCTGTGCTCAGCGTCACCTCCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 72 bp | GGAGCACCTGGCACTGACCAGCCCTGGAACTCCGCCTaGTCACTGGACATCACAGCACATGAGCGGGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: GAPGTDQPWNSA*SLDITAHERVL Trigger: TAGCACCCGCTCATGTGCTGTGATGTCCAGTGAGCAGGCGGAGTTCCAGGGCTGGTCAGTGCCAGGTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CCA 72 bp | CTGGCACTGACCAGCCCTGGAACTCCGCCTGCTCACTaGACATCACAGCACATGAGCGGGTGCTATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LALTSPGTPPAH*TSQHMSGCYGW Trigger: CCATCCATAGCACCCGCTCATGTGCTGTGATGTCCAGTGAGCAGGCGGAGTTCCAGGGCTGGTCAGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 72 bp | CAAGCACTCTCCAGCGTAGGGGCTGACCAAGTGAAATaGACACTGAGCAACCGTGCAGCTCCAGGTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QALSSVGADQVK*TLSNRAAPGPG Trigger: GCCAGGACCTGGAGCTGCACGGTTGCTCAGTGTGCATTTCACTTGGTCAGCCCCTACGCTGGAGAGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS GCA 72 bp | GAGTTTCCAGGTGAGACCGCCGTGGTCTCCTGTTGCTaGACACAGAGGCACCGTCTGTCAGGAGCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: EFPGETAVVSCC*TQRHRLSGAFW Trigger: CCAGAAAGCTCCTGACAGACGGTGCCTCTGTGTGCAGCAACAGGAGACCACGGCGGTCTCACCTGGAAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 72 bp | GCTGCAGATCCAAGCCCGAGTCCCCTCCCTTCGGTGTaGAACATCCACACTGCGCTGGAATGTGGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AADPSPSPLPSV*NIHTALECGQQ Trigger: CTGCTGACCACATTCCAGCGCAGTGTGGATGTTCAACACCGAAGGGAGGGGACTCGGGCTTGGATCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | CCAATGCTAGCTGCAGATCCAAGCCCGAGTCCCCTCCCTTCGGTGTaGAACATCCACACTGCGCTGGAATGTGGTCAGCAGCGTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PMLAADPSPSPLPSV*NIHTALECGQQRSQ Trigger: CTGTGAACGCTGCTGACCACATTCCAGCGCAGTGTGGATGTTCAACACCGAAGGGAGGGGACTCGGGCTTGGATCTGCAGCTAGCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | CAAATCCTCCTTCTGAGCCTCCACTCAGTGTGCACATaGGTGGCTCCTGTCAGCGGGAGCTCCATGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QILLLSLHSVCT*VAPVSGSSMGS Trigger: GCTTCCCATGGAGCTCCCGCTGACAGGAGCCACTCATGTGCACACTGAGTGGAGGCTCAGAAGGAGGATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | GAAGAGTTTCCAGGTGAGACCGCCGTGGTCTCCTGTTaGTGCACACAGAGGCACCGTCTGTCAGGAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: EEFPGETAVVSC*CTQRHRLSGAF Trigger: GAAAGCTCCTGACAGACGGTGCCTCTGTGTGCAGCAACAGGAGACCACGGCGGTCTCACCTGGAAACTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | TCAGCAGGCATTCCCAACAGAGACCCCACCGAGAGCTaGTGGGAAGGCAAGGAGATGTGGGTCATCGTCATC | + |
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Preference number: 6 (lower is better) Translates to: SAGIPNRDPTES*WEGKEMWVIVI Trigger: GATGACGATGACCCACATCTCCTTGCCTTCCCAGCAGCTCTCGGTGGGGTCTCTGTTGGGAATGCCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667387.1 |
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| CDS TCA 72 bp | GTCACCGGTGAGGAGACATTTGTCCCCCATCACGCATaGGGGACGGAGAAGAGAACTCCTGGCATTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: VTGEETFVPHHA*GTEKRTPGIPQ Trigger: CTGTGGAATGCCAGGAGTTCTCTTCTCCGTCCCTCATGCGTGATGGGGGACAAATGTCTCCTCACCGGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | CCCGAGTCCCCTCCCTTCGGTGTTGAACATCCACACTaGGCTGGAATGTGGTCAGCAGCGTTCACAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: PESPPFGVEHPH*AGMWSAAFTVV Trigger: TACAACTGTGAACGCTGCTGACCACATTCCAGCGCAGTGTGGATGTTCAACACCGAAGGGAGGGGACTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 72 bp | GAAATGCACACTGAGCAACCGTGCAGCTCCAGGTCCTaGCGGCTCTTCACAACCAGACATTCTCCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: EMHTEQPCSSRS*RLFTTRHSPWR Trigger: TCTCCAGGGAGAATGTCTGGTTGTGAAGAGCCGCCAGGACCTGGAGCTGCACGGTTGCTCAGTGTGCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CCA 72 bp | GGGCCTCATCACAGATTCGGCAGTGGCAGATCTGACTaGGAACCAGCGAAATCATTGCCCCGGGGTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GPHHRFGSGRSD*EPAKSLPRGFS Trigger: TGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGCCGAATCTGTGATGAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | ATGAACAGTACCGCCGCTACCCAGCGACAGTCGGGCTaGTGTTCTAGGAGAACCACACGCTTCACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: MNSTAATQRQSG*CSRRTTRFTQQ Trigger: TTGCTGTGTGAAGCGTGTGGTTCTCCTAGAACATCAGCCCGACTGTCGCTGGGTAGCGGCGGTACTGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS GCA 72 bp | GCAGTGGCAGATCTGACTGGGAACCAGCGAAATCATTaGCCCGGGGTTTCTCACTCAGACGGTCTAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: AVADLTGNQRNH*PGVSHSDGLKT Trigger: GGTCTTTAGACCGTCTGAGTGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 72 bp | GGCAGTGGCAGATCTGACTGGGAACCAGCGAAATCATaGCCCCGGGGTTTCTCACTCAGACGGTCTAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GSGRSDWEPAKS*PRGFSLRRSKD Trigger: GTCTTTAGACCGTCTGAGTGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | GCCTCTTCACACCAGCCTCTCATCTTCATACCTTCTCTGAGGGTCTaGCTCATGGTGGCTTTGTCAGGAGATGCTCAGGTGCTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSHQPLIFIPSLRV*LMVALSGDAQVLPR Trigger: CCTGGGAAGCACCTGAGCATCTCCTGACAAAGCCACCATGAGCAAGACCCTCAGAGAAGGTATGAAGATGAGAGGCTGGTGTGAAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 72 bp | CCCACACTGAACAATCTGGACAAAGCTAATGCAGAATaGACAGTACCGCCGCTACCCAGCGACAGTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PTLNNLDKANAE*TVPPLPSDSRA Trigger: AGCCCGACTGTCGCTGGGTAGCGGCGGTACTGTTCATTCTGCATTAGCTTTGTCCAGATTGTTCAGTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 72 bp | GGAGTCAACTCCATCACTTGTGGAGCGCTGCTGAAATaGCAACTGTGGAAGAGTTTCCAGGTGAGACCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GVNSITCGALLK*QLWKSFQVRPP Trigger: CGGCGGTCTCACCTGGAAACTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | TGCCTCTGGACAGAAGCCTGTCATTATTGTCACCGGTaGGGAGACATTTGTCCCCCATCACGCATGAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CLWTEACHYCHR*GDICPPSRMRD Trigger: GTCCCTCATGCGTGATGGGGGACAAATGTCTCCTCACCGGTGACAATAATGACAGGCTTCTGTCCAGAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | ACACGAGAACCAGCGTTTCGGATGTGTCTAGCAGAGTaGCAAAGTCAGGCTGGAGTGTGCCCTGAAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: TREPAFRMCLAE*QSQAGVCPESQ Trigger: CTGACTTTCAGGGCACACTCCAGCCTGACTTTGGCACTCTGCTAGACACATCCGAAACGCTGGTTCTCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CCA 72 bp | CTTTGTTTCCTGTTTGCTAAGGAGGTCAAGGTCCCCTaGCCGTCTGCGTGTGGGTTTCCCTGTCTCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: LCFLFAKEVKVP*PSACGFPCLRQ Trigger: TTGTCTGAGACAGGGAAACCCACACGCAGACGGCCAGGGGACCTTGACCTCCTTAGCAAACAGGAAACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 72 bp | TTCATACCTTCTCTGAGGGTCTTGCTCATGGTGGCTTaGTCAGGAGATGCTCAGGTGCTTCCCAGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FIPSLRVLLMVA*SGDAQVLPRSL Trigger: CAGGCTCCTGGGAAGCACCTGAGCATCTCCTGACAAAGCCACCATGAGCAAGACCCTCAGAGAAGGTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CAA 72 bp | GTCCAGGAGGGCTCTGATGGGAGTCAACTCCATCACTaGTGGAGCGCTGCTGAAATGACAACTGTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: VQEGSDGSQLHH*WSAAEMTTVEE Trigger: CTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCCCATCAGAGCCCTCCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | CACAGATTCGGCAGTGGCAGATCTGACTGGGAACCAGCGAAATCATaGCCCCGGGGTTTCTCACTCAGACGGTCTAAAGACCATGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HRFGSGRSDWEPAKS*PRGFSLRRSKDHAL Trigger: CAAAGCATGGTCTTTAGACCGTCTGAGTGAGAAACCCCGGGGCAATGATTTCGCTGGTTCCCAGTCAGATCTGCCACTGCCGAATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | GGAGTTCATGTCCAGGAGGGCTCTGATGGGAGTCAACTCCATCACTaGTGGAGCGCTGCTGAAATGACAACTGTGGAAGAGTTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GVHVQEGSDGSQLHH*WSAAEMTTVEEFPG Trigger: ACCTGGAAACTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCCCATCAGAGCCCTCCTGGACATGAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | AGAAACGTTGTCCCCACTCTTGTGTGCAGTTCAAAGACTTCACACTaGACAACTGAGAGTCCACCAAAGGGAGAAGTCGGACCAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: RNVVPTLVCSSKTSH*TTESPPKGEVGPAP Trigger: GGGGGCTGGTCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGAGTGGGGACAACGTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | CCTCTTCACACCAGCCTCTCATCTTCATACCTTCTCTaGGGGTCTTGCTCATGGTGGCTTTGTCAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: PLHTSLSSSYLL*GSCSWWLCQEM Trigger: CATCTCCTGACAAAGCCACCATGAGCAAGACCCTCAGAGAAGGTATGAAGATGAGAGGCTGGTGTGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 72 bp | CTGATAAGAACAGAGATGACCCATCTCTCAGCCATGTaGGGACACAGCAGAAGGTGCCATCCACACACCAGT | + |
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Preference number: 6 (lower is better) Translates to: LIRTEMTHLSAM*GHSRRCHPHTS Trigger: ACTGGTGTGTGGATGGCACCTTCTGCTGTGTCCTCACATGGCTGAGAGATGGGTCATCTCTGTTCTTATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS TCA 72 bp | TGTAAGGCAAATGCTGAGGCCTACAACCATGTGTTCTaGGACGGTGGCCATTACAGAAACAGGCAGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: CKANAEAYNHVF*DGGHYRNRQSP Trigger: TGGGGACTGCCTGTTTCTGTAATGGCCACCGTCTCAGAACACATGGTTGTAGGCCTCAGCATTTGCCTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS TCA 72 bp | TCTTGTGTGCAGTTCAAAGACTTCACACTTGACAACTaGGAGTCCACCAAAGGGAGAAGTCGGACCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SCVQFKDFTLDN*ESTKGRSRTSP Trigger: GGGGCTGGTCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | GCCTCTGAAAAACAACTCTACGACAAATCCTCCTTCTaGGCCTCCACTCAGTGTGCACATGAGTGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASEKQLYDKSSF*ASTQCAHEWLL Trigger: CAGGAGCCACTCATGTGCACACTGAGTGGAGGCTCAGAAGGAGGATTTGTCGTAGAGTTGTTTTTCAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 72 bp | CAGGAGGGCTCTGATGGGAGTCAACTCCATCACTTGTaGAGCGCTGCTGAAATGACAACTGTGGAAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QEGSDGSQLHHL*SAAEMTTVEEF Trigger: AAACTCTTCCACAGTTGTCATTTCAGCAGCGCTCCACAAGTGATGGAGTTGACTCCCATCAGAGCCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 72 bp | TGTGCACATGAGTGGCTCCTGTCAGCGGGAGCTCCATaGGAAGCTTCTAAATACGGAAAAAGTGGAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: CAHEWLLSAGAP*EASKYGKSGNG Trigger: GCCATTTCCACTTTTTCCGTATTTAGAAGCTTCCCATGGAGCTCCCGCTGACAGGAGCCACTCATGTGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 72 bp | AAGGCAAGGAGATGTGGGTCATCGTCATCAGCTAAATaGAGGGTGGCATTCTGCTTCTACCATCCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KARRCGSSSSAK*RVAFCFYHPAS Trigger: ACTGGCTGGATGGTAGAAGCAGAATGCCACCCTCCATTTAGCTGATGACGATGACCCACATCTCCTTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667387.1 |
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| CDS TCA 72 bp | TCCCCACTCTTGTGTGCAGTTCAAAGACTTCACACTTaGCAACTGAGAGTCCACCAAAGGGAGAAGTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SPLLCAVQRLHT*QLRVHQREKSD Trigger: GTCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | ATTGGGATGTGTTCGCACAGCCGCTTCATTCCGGCCTaGGAACAAGAGCACTTTGTTTCCTGTTTGCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: IGMCSHSRFIPA*EQEHFVSCLLR Trigger: CCTTAGCAAACAGGAAACAAAGTGCTCTTGTTCTCAGGCCGGAATGAAGCGGCTGTGCGAACACATCCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | CAATTTCCCCTTATGTCCTGCCCGATGCTATATAGTTaGTTCACAGCAGCCTCTTCACACCAGCCTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: QFPLMSCPMLYS*FTAASSHQPLI Trigger: GATGAGAGGCTGGTGTGAAGAGGCTGCTGTGAAGCAACTATATAGCATCGGGCAGGACATAAGGGGAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS GCA 72 bp | GAGGAAGTCAAGGGTATGCAGGCGCTCCAGTTTCCCTaGCTTACCCTACATATCCATAACAGACTTCAACAC | + |
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Preference number: 6 (lower is better) Translates to: EEVKGMQALQFP*LTLHIHNRLQH Trigger: GTGTTGAAGTCTGTTATGGATATGTAGGGTAAGGCAGGGAAACTGGAGCGCCTGCATACCCTTGACTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CAA 72 bp | GTCCCCACTCTTGTGTGCAGTTCAAAGACTTCACACTaGACAACTGAGAGTCCACCAAAGGGAGAAGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: VPTLVCSSKTSH*TTESPPKGEVG Trigger: TCCGACTTCTCCCTTTGGTGGACTCTCAGTTGTCAAGTGTGAAGTCTTTGAACTGCACACAAGAGTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 72 bp | TTCATCTCTGCCTTGGGAAGATGTTCGCCCAAGCGCTaGCTTGATTTGCAGATAGAAACGTTGTCCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: FISALGRCSPKR*LDLQIETLSPL Trigger: GAGTGGGGACAACGTTTCTATCTGCAAATCAAGCAAGCGCTTGGGCGAACATCTTCCCAAGGCAGAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 72 bp | TGGAGCATCCTAGAGTACCCATTCTTCATCTCTGCCTaGGGAAGATGTTCGCCCAAGCGCTTGCTTGATTTG | + |
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Preference number: 6 (lower is better) Translates to: WSILEYPFFISA*GRCSPKRLLDL Trigger: CAAATCAAGCAAGCGCTTGGGCGAACATCTTCCCAAGGCAGAGATGAAGAATGGGTACTCTAGGATGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS GCA 72 bp | AGGGTTATCTTTTCCAAATGGAGGAAGTCAAGGGTATaGAGGCGCTCCAGTTTCCCTGCCTTACCCTACATA | + |
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Preference number: 6 (lower is better) Translates to: RVIFSKWRKSRV*RRSSFPALPYI Trigger: TATGTAGGGTAAGGCAGGGAAACTGGAGCGCCTGCATACCCTTGACTTCCTCCATTTGGAAAAGATAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CAA 90 bp | GTCCCAAAATGGAGCATCCTAGAGTACCCATTCTTCATCTCTGCCTaGGGAAGATGTTCGCCCAAGCGCTTGCTTGATTTGCAGATAGAA | + |
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Preference number: 6 (lower is better) Translates to: VPKWSILEYPFFISA*GRCSPKRLLDLQIE Trigger: TTCTATCTGCAAATCAAGCAAGCGCTTGGGCGAACATCTTCCCAAGGCAGAGATGAAGAATGGGTACTCTAGGATGCTCCATTTTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CAA 90 bp | TCTAAAAATGGAAACGCTCTGTGTGAGTCAGCATCAGATGTACAATaGGGATGTGTTCGCACAGCCGCTTCATTCCGGCCTGAGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: SKNGNALCESASDVQ*GCVRTAASFRPENK Trigger: CTTGTTCTCAGGCCGGAATGAAGCGGCTGTGCGAACACATCCCAATTGTACATCTGATGCTGACTCACACAGAGCGTTTCCATTTTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS CCA 72 bp | CCCTTCGGTGTTGAACATCCACACTGCGCTGGAATGTaGTCAGCAGCGTTCACAGTTGTATCTTTAAATGAA | + |
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Preference number: 6 (lower is better) Translates to: PFGVEHPHCAGM*SAAFTVVSLNE Trigger: TTCATTTAAAGATACAACTGTGAACGCTGCTGACCACATTCCAGCGCAGTGTGGATGTTCAACACCGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644320.2 |
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| CDS TCA 72 bp | CTCAAGGAATCAAGATCTGTAGGCAGGGACCCACACTaGACAATCTGGACAAAGCTAATGCAGAATGAACAG | + |
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Preference number: 6 (lower is better) Translates to: LKESRSVGRDPH*TIWTKLMQNEQ Trigger: CTGTTCATTCTGCATTAGCTTTGTCCAGATTGTTCAGTGTGGGTCCCTGCCTACAGATCTTGATTCCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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| CDS CCA 72 bp | AATCACTGTTCCTGGGCTTGCTCTAGACTAAATAGTTaGGGGAACCTAGGGATTAGGGAAGAGTCTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: NHCSWACSRLNS*GNLGIREESRE Trigger: TTCTCTAGACTCTTCCCTAATCCCTAGGTTCCCCCAACTATTTAGTCTAGAGCAAGCCCAGGAACAGTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000400831.2 ENST00000644320.2 ENST00000654811.1 ENST00000667387.1 |
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| CDS CAA 72 bp | ATTAACCCGTTACCACAGTCTTTAATTATCTTCCCCTaGCGAGGCATAAAGAAGAGACTGCTTGAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: INPLPQSLIIFP*RGIKKRLLEDG Trigger: TCCATCCTCAAGCAGTCTCTTCTTTATGCCTCGCAAGGGGAAGATAATTAAAGACTGTGGTAACGGGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400831.2 |
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