Pregenerated sensors for LINC02484 (Homo sapiens)
Ensembl gene IDs: ENSG00000248685Ensembl transcript IDs: ENST00000513843.6, ENST00000514877.2, ENST00000658479.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTACCAAACACTATCATGGTTCCTCATTGTGTGTCCAGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: CTKHYHGSSLCVQNW*VLGLTDFKNEAADP Trigger: AGGGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS GCA 90 bp | ATAAAAGCAGCGTGGACCCAAAGAGTGAGCAGTAGCAAGATTTATTaGAAAGAGCGAAAGAACAAAGCTTCCGCAGTGTGGAAGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: IKAAWTQRVSSSKIY*KERKNKASAVWKGT Trigger: GGTTCCCTTCCACACTGCGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTACTGCTCACTCTTTGGGTCCACGCTGCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CCA 90 bp | CTATGTACCAAACACTATCATGGTTCCTCATTGTGTGTCCAGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: LCTKHYHGSSLCVQN*WVLGLTDFKNEAAD Trigger: GTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS TCA 90 bp | CTCCCAGTAATGAATCCACTGTGTATTCACATTATACTGAGTCACTaGCTTGGGGAAATCTGGGGAAAGTATGATCTTAGTGGGCATGCA | + |
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Preference number: 5 (lower is better) Translates to: LPVMNPLCIHIILSH*LGEIWGKYDLSGHA Trigger: TGCATGCCCACTAAGATCATACTTTCCCCAGATTTCCCCAAGTCAGTGACTCAGTATAATGTGAATACACAGTGGATTCATTACTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS GCA 90 bp | AGAATTATGTACAGTAGGCAACGTGCTCCGTGTGGTTTCCAGAATTaGTGGAGGGATGCACAGTTTCCGTCAACTGAAATACAGAATTTT | + |
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Preference number: 5 (lower is better) Translates to: RIMYSRQRAPCGFQN*WRDAQFPSTEIQNF Trigger: AAAATTCTGTATTTCAGTTGACGGAAACTGTGCATCCCTCCAGCAATTCTGGAAACCACACGGAGCACGTTGCCTACTGTACATAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS CCA 90 bp | TTAAGAAAACCATTTCCAGTGTCCTCTATGTACCAAACACTATCATaGTTCCTCATTGTGTGTCCAGAATTGGTGGGTTCTTGGTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LRKPFPVSSMYQTLS*FLIVCPELVGSWSH Trigger: GTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACATAGAGGACACTGGAAATGGTTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS GCA 90 bp | TATGGGCTCCCCATGTGTCTCTACTCAAAAGTGTTAAGTAAATTGTaGATTAAGATTGATGCTGGAGAATTTAAGGACTCTGGGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: YGLPMCLYSKVLSKL*IKIDAGEFKDSGLG Trigger: TCCTAACCCAGAGTCCTTAAATTCTCCAGCATCAATCTTAATGCACAATTTACTTAACACTTTTGAGTAGAGACACATGGGGAGCCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CAA 72 bp | ATGGTTCCTCATTGTGTGTCCAGAATTGGTGGGTTCTaGGTCTCACTGACTTCAAGAATGAAGCCGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: MVPHCVSRIGGF*VSLTSRMKPRT Trigger: GGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS GCA 72 bp | TACAGTAGGCAACGTGCTCCGTGTGGTTTCCAGAATTaGTGGAGGGATGCACAGTTTCCGTCAACTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: YSRQRAPCGFQN*WRDAQFPSTEI Trigger: TATTTCAGTTGACGGAAACTGTGCATCCCTCCAGCAATTCTGGAAACCACACGGAGCACGTTGCCTACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS GCA 72 bp | GCGTGGACCCAAAGAGTGAGCAGTAGCAAGATTTATTaGAAAGAGCGAAAGAACAAAGCTTCCGCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AWTQRVSSSKIY*KERKNKASAVW Trigger: CCACACTGCGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTACTGCTCACTCTTTGGGTCCACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CAA 90 bp | GCTGATGCCTTCACAGAAGGTAGCCTTCTTCCCATATGTCAGTCCTaGACTATCTTATCTAGAATAAGCCCCACCCATCTCAGTTATGGT | + |
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Preference number: 6 (lower is better) Translates to: ADAFTEGSLLPICQS*TILSRISPTHLSYG Trigger: ACCATAACTGAGATGGGTGGGGCTTATTCTAGATAAGATAGTCAAGGACTGACATATGGGAAGAAGGCTACCTTCTGTGAAGGCATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS CCA 72 bp | CACTATCATGGTTCCTCATTGTGTGTCCAGAATTGGTaGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HYHGSSLCVQNW*VLGLTDFKNEA Trigger: GGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CAA 90 bp | CATTTCCAGTGTCCTCTATGTACCAAACACTATCATGGTTCCTCATaGTGTGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: HFQCPLCTKHYHGSS*CVQNWWVLGLTDFK Trigger: CTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACATAGAGGACACTGGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CCA 72 bp | CCATTTCCAGTGTCCTCTATGTACCAAACACTATCATaGTTCCTCATTGTGTGTCCAGAATTGGTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PFPVSSMYQTLS*FLIVCPELVGS Trigger: AGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACATAGAGGACACTGGAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CAA 72 bp | TTCACAGAAGGTAGCCTTCTTCCCATATGTCAGTCCTaGACTATCTTATCTAGAATAAGCCCCACCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: FTEGSLLPICQS*TILSRISPTHL Trigger: GAGATGGGTGGGGCTTATTCTAGATAAGATAGTCAAGGACTGACATATGGGAAGAAGGCTACCTTCTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS CAA 72 bp | AAATCTGGGGAAAGTATGATCTTAGTGGGCATGCAGTaGTGGATCCAAAGATATAGCATCTGGAGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KSGESMILVGMQ*WIQRYSIWSVQ Trigger: CTGGACACTCCAGATGCTATATCTTTGGATCCACAACTGCATGCCCACTAAGATCATACTTTCCCCAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CAA 72 bp | TGTCCTCTATGTACCAAACACTATCATGGTTCCTCATaGTGTGTCCAGAATTGGTGGGTTCTTGGTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: CPLCTKHYHGSS*CVQNWWVLGLT Trigger: AGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTTGGTACATAGAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS TCA 72 bp | TTCCAACAGAGGTTTGGTTTCCAGAAAAGGAGTACTTaGGCTACGGTCTCCTGTTGGAAAACTCTCATATCT | + |
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Preference number: 6 (lower is better) Translates to: FQQRFGFQKRST*ATVSCWKTLIS Trigger: AGATATGAGAGTTTTCCAACAGGAGACCGTAGCTCAAGTACTCCTTTTCTGGAAACCAAACCTCTGTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CAA 72 bp | ATTCCAACAGAGGTTTGGTTTCCAGAAAAGGAGTACTaGAGCTACGGTCTCCTGTTGGAAAACTCTCATATC | + |
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Preference number: 6 (lower is better) Translates to: IPTEVWFPEKEY*SYGLLLENSHI Trigger: GATATGAGAGTTTTCCAACAGGAGACCGTAGCTCAAGTACTCCTTTTCTGGAAACCAAACCTCTGTTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CAA 90 bp | CCCCTACTCCACCACGAATGTCCTCTTTTTATCATCATCCTTCACTaGTACTATAGAAGTAGCAGACTAGCCAATATTTGTACTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PLLHHECPLFIIILH*YYRSSRLANICTAG Trigger: ACCAGCAGTACAAATATTGGCTAGTCTGCTACTTCTATAGTACAAGTGAAGGATGATGATAAAAAGAGGACATTCGTGGTGGAGTAGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS CCA 72 bp | AAACACTATCATGGTTCCTCATTGTGTGTCCAGAATTaGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: KHYHGSSLCVQN*WVLGLTDFKNE Trigger: TTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACACACAATGAGGAACCATGATAGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658479.1 |
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| CDS CCA 72 bp | AATGTTATCCGAAATTCTAACAAGTTCATTAGTCCCTaGAAGAATCATCCATCTGGCCGTGTTGAGACGAAT | + |
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Preference number: 6 (lower is better) Translates to: NVIRNSNKFISP*KNHPSGRVETN Trigger: ATTCGTCTCAACACGGCCAGATGGATGATTCTTCCAGGGACTAATGAACTTGTTAGAATTTCGGATAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS CAA 90 bp | GTTTATGGGCTCCCCATGTGTCTCTACTCAAAAGTGTTAAGTAAATaGTGCATTAAGATTGATGCTGGAGAATTTAAGGACTCTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: VYGLPMCLYSKVLSK*CIKIDAGEFKDSGL Trigger: TAACCCAGAGTCCTTAAATTCTCCAGCATCAATCTTAATGCACAATTTACTTAACACTTTTGAGTAGAGACACATGGGGAGCCCATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS TCA 72 bp | ATGAATCCACTGTGTATTCACATTATACTGAGTCACTaGCTTGGGGAAATCTGGGGAAAGTATGATCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: MNPLCIHIILSH*LGEIWGKYDLS Trigger: ACTAAGATCATACTTTCCCCAGATTTCCCCAAGTCAGTGACTCAGTATAATGTGAATACACAGTGGATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CAA 72 bp | CACCACGAATGTCCTCTTTTTATCATCATCCTTCACTaGTACTATAGAAGTAGCAGACTAGCCAATATTTGT | + |
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Preference number: 6 (lower is better) Translates to: HHECPLFIIILH*YYRSSRLANIC Trigger: ACAAATATTGGCTAGTCTGCTACTTCTATAGTACAAGTGAAGGATGATGATAAAAAGAGGACATTCGTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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| CDS GCA 72 bp | CCCATGTGTCTCTACTCAAAAGTGTTAAGTAAATTGTaGATTAAGATTGATGCTGGAGAATTTAAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: PMCLYSKVLSKL*IKIDAGEFKDS Trigger: AGAGTCCTTAAATTCTCCAGCATCAATCTTAATGCACAATTTACTTAACACTTTTGAGTAGAGACACATGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513843.6 |
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| CDS CCA 72 bp | TCTTTAATGGTCAACATTAGCCTGTCTGATATGCTATaGCTTAAGCCTTTGACCTTATCTATTCTACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLMVNISLSDML*LKPLTLSILLF Trigger: AAAAAGTAGAATAGATAAGGTCAAAGGCTTAAGCCATAGCATATCAGACAGGCTAATGTTGACCATTAAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514877.2 |
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