Pregenerated sensors for LINC02483 (Homo sapiens)
Ensembl gene IDs: ENSG00000251383Ensembl transcript IDs: ENST00000512043.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGTGTCATATCAAGGGCTGTGTGTTGTTCTCTTCATTGAGGGATTaGGCACTCAGCAGTGGCAGTTGCTGGCTTAGACTTGGTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: WCHIKGCVLFSSLRD*ALSSGSCWLRLGGR Trigger: CCTTCCACCAAGTCTAAGCCAGCAACTGCCACTGCTGAGTGCTCAATCCCTCAATGAAGAGAACAACACACAGCCCTTGATATGACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 90 bp | AGTCGGGCTGGCAAACTTGTCCAGCCAGATCTATATCCTCTCATATaGTTGAGCAGCAGTGTTCTGGTCAATCAATCAGTCACTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SRAGKLVQPDLYPLI*LSSSVLVNQSVTEG Trigger: ACCTTCAGTGACTGATTGATTGACCAGAACACTGCTGCTCAAGCATATGAGAGGATATAGATCTGGCTGGACAAGTTTGCCAGCCCGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 90 bp | TTGTACCTCCTTAAGATGAGAGGTTTGAGAAGACATAATGCAGAGTaGCATGTTGAGATTAGGCATCCTATAAACTCCCAGTTGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LYLLKMRGLRRHNAE*HVEIRHPINSQLLE Trigger: CTCCAGCAACTGGGAGTTTATAGGATGCCTAATCTCAACATGGCACTCTGCATTATGTCTTCTCAAACCTCTCATCTTAAGGAGGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 90 bp | CCCTACATTGTTCAAGGATCAACTATATTATATCCTGGAGAACAGTaGCCCAACCCTATAAAATGTTATTCCCATGCAGACTCTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: PYIVQGSTILYPGEQ*PNPIKCYSHADSST Trigger: AGTTGAAGAGTCTGCATGGGAATAACATTTTATAGGGTTGGGGCACTGTTCTCCAGGATATAATATAGTTGATCCTTGAACAATGTAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS TCA 72 bp | GGTGTCATATCAAGGGCTGTGTGTTGTTCTCTTCATTaGGGGATTGAGCACTCAGCAGTGGCAGTTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GVISRAVCCSLH*GIEHSAVAVAG Trigger: GCCAGCAACTGCCACTGCTGAGTGCTCAATCCCTCAATGAAGAGAACAACACACAGCCCTTGATATGACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CAA 72 bp | TGCTGGCTTAGACTTGGTGGAAGGGAATCTATGTTGTaGATCCTGTGTAGACCTGCCATCCCTGCTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: CWLRLGGRESML*ILCRPAIPAAI Trigger: TATGGCAGCAGGGATGGCAGGTCTACACAGGATCAACAACATAGATTCCCTTCCACCAAGTCTAAGCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CAA 90 bp | CGGGCTGGCAAACTTGTCCAGCCAGATCTATATCCTCTCATATGCTaGAGCAGCAGTGTTCTGGTCAATCAATCAGTCACTGAAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RAGKLVQPDLYPLIC*SSSVLVNQSVTEGS Trigger: AGAACCTTCAGTGACTGATTGATTGACCAGAACACTGCTGCTCAAGCATATGAGAGGATATAGATCTGGCTGGACAAGTTTGCCAGCCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CAA 90 bp | CCTATGGTCATGGGCCCACTCTTGTACCTCCTTAAGATGAGAGGTTaGAGAAGACATAATGCAGAGTGCCATGTTGAGATTAGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: PMVMGPLLYLLKMRG*RRHNAECHVEIRHP Trigger: AGGATGCCTAATCTCAACATGGCACTCTGCATTATGTCTTCTCAAACCTCTCATCTTAAGGAGGTACAAGAGTGGGCCCATGACCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CCA 72 bp | CAGACTTTCTCAGCTGAGATTTCTCTAGAGTCGGGCTaGCAAACTTGTCCAGCCAGATCTATATCCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QTFSAEISLESG*QTCPARSISSH Trigger: ATGAGAGGATATAGATCTGGCTGGACAAGTTTGCCAGCCCGACTCTAGAGAAATCTCAGCTGAGAAAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CAA 72 bp | GTAGGACCAGGAAATCCTATGGTCATGGGCCCACTCTaGTACCTCCTTAAGATGAGAGGTTTGAGAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: VGPGNPMVMGPL*YLLKMRGLRRH Trigger: ATGTCTTCTCAAACCTCTCATCTTAAGGAGGTACAAGAGTGGGCCCATGACCATAGGATTTCCTGGTCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 72 bp | GGCAAACTTGTCCAGCCAGATCTATATCCTCTCATATaGTTGAGCAGCAGTGTTCTGGTCAATCAATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GKLVQPDLYPLI*LSSSVLVNQSV Trigger: GACTGATTGATTGACCAGAACACTGCTGCTCAAGCATATGAGAGGATATAGATCTGGCTGGACAAGTTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CCA 72 bp | TTCTGTCCCCTTAAGGTGGAGATGTCCAGTGATGAATaGTGTCATATCAAGGGCTGTGTGTTGTTCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FCPLKVEMSSDE*CHIKGCVLFSS Trigger: TGAAGAGAACAACACACAGCCCTTGATATGACACCATTCATCACTGGACATCTCCACCTTAAGGGGACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS TCA 72 bp | CCCTATAAAATGTTATTCCCATGCAGACTCTTCAACTaGGTCTTCAGTAAGCTCCTCCACTGTTCTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PYKMLFPCRLFN*VFSKLLHCSVR Trigger: CCTGACAGAACAGTGGAGGAGCTTACTGAAGACTCAGTTGAAGAGTCTGCATGGGAATAACATTTTATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS CAA 72 bp | ATGGGCCCACTCTTGTACCTCCTTAAGATGAGAGGTTaGAGAAGACATAATGCAGAGTGCCATGTTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: MGPLLYLLKMRG*RRHNAECHVEI Trigger: AATCTCAACATGGCACTCTGCATTATGTCTTCTCAAACCTCTCATCTTAAGGAGGTACAAGAGTGGGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 72 bp | CTTAAGATGAGAGGTTTGAGAAGACATAATGCAGAGTaGCATGTTGAGATTAGGCATCCTATAAACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LKMRGLRRHNAE*HVEIRHPINSQ Trigger: CTGGGAGTTTATAGGATGCCTAATCTCAACATGGCACTCTGCATTATGTCTTCTCAAACCTCTCATCTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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| CDS GCA 72 bp | GTTCAAGGATCAACTATATTATATCCTGGAGAACAGTaGCCCAACCCTATAAAATGTTATTCCCATGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VQGSTILYPGEQ*PNPIKCYSHAD Trigger: GTCTGCATGGGAATAACATTTTATAGGGTTGGGGCACTGTTCTCCAGGATATAATATAGTTGATCCTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512043.1 |
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