Pregenerated sensors for LINC02482 (Homo sapiens)
Ensembl gene IDs: ENSG00000251580Ensembl transcript IDs: ENST00000513179.1, ENST00000515205.1, ENST00000647523.2, ENST00000654965.1, ENST00000656634.1, ENST00000662111.1, ENST00000667300.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCTGCGGGCCACCTGGTCTAGGCTAGGCCTGTCTAGAGCAGCTTaGTTCTGTGTTTCTCTCACCATCTTCCCAAGACCGGTGCCCGTT | + |
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Preference number: 5 (lower is better) Translates to: GLRATWSRLGLSRAA*FCVSLTIFPRPVPV Trigger: AACGGGCACCGGTCTTGGGAAGATGGTGAGAGAAACACAGAACCAAGCTGCTCTAGACAGGCCTAGCCTAGACCAGGTGGCCCGCAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CCA 90 bp | AGTTGGATGATCCAGGCTGGGCTCAGTAATGGTCTGCGGGCCACCTaGTCTAGGCTAGGCCTGTCTAGAGCAGCTTGGTTCTGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SWMIQAGLSNGLRAT*SRLGLSRAAWFCVS Trigger: AGAAACACAGAACCAAGCTGCTCTAGACAGGCCTAGCCTAGACCAGGTGGCCCGCAGACCATTACTGAGCCCAGCCTGGATCATCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS TCA 90 bp | AACAATAAACATTCCTCATGGTCTGCAGTTTGGCTGGGAGTTGGATaGTCCAGGCTGGGCTCAGTAATGGTCTGCGGGCCACCTGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: NNKHSSWSAVWLGVG*SRLGSVMVCGPPGL Trigger: TAGACCAGGTGGCCCGCAGACCATTACTGAGCCCAGCCTGGATCATCCAACTCCCAGCCAAACTGCAGACCATGAGGAATGTTTATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CCA 90 bp | TGCCCACCCCCATCTAAGGACCCCCTTCCTACTTTCTTCCAATCATaGCCTCAAGCAAGAAGTCTAGCATCTTGTGAGCCACATCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: CPPPSKDPLPTFFQS*PQARSLASCEPHQV Trigger: GACCTGATGTGGCTCACAAGATGCTAGACTTCTTGCTTGAGGCCATGATTGGAAGAAAGTAGGAAGGGGGTCCTTAGATGGGGGTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS GCA 90 bp | CACATTGGCTGCAGTGAGATCGTGACATTAGGATTCCTGGGAGCCTaGGCTGGGCAGAATTTAAGATGGCTCCTCCATGATCTTCACTCT | + |
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Preference number: 5 (lower is better) Translates to: HIGCSEIVTLGFLGA*AGQNLRWLLHDLHS Trigger: AGAGTGAAGATCATGGAGGAGCCATCTTAAATTCTGCCCAGCGCAGGCTCCCAGGAATCCTAATGTCACGATCTCACTGCAGCCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000513179.1 ENST00000515205.1 ENST00000654965.1 ENST00000656634.1 ENST00000662111.1 |
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| CDS CCA 90 bp | GTGACATTAGGATTCCTGGGAGCCTGCGCTGGGCAGAATTTAAGATaGCTCCTCCATGATCTTCACTCTCTGGGTGAAAACTGTCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VTLGFLGACAGQNLR*LLHDLHSLGENCRS Trigger: TGACCGACAGTTTTCACCCAGAGAGTGAAGATCATGGAGGAGCCATCTTAAATTCTGCCCAGCGCAGGCTCCCAGGAATCCTAATGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000513179.1 ENST00000515205.1 ENST00000654965.1 ENST00000656634.1 ENST00000662111.1 |
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| CDS GCA 90 bp | GCCAGGTCCTCTACTTTAAAGCTAGGGAATGTAAGGCTTTGGTTCTaGAACCTGGAAGTGGCTCAGCAGCACAGGAGTTGGCAAACATTT | + |
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Preference number: 5 (lower is better) Translates to: ARSSTLKLGNVRLWF*NLEVAQQHRSWQTF Trigger: AAATGTTTGCCAACTCCTGTGCTGCTGAGCCACTTCCAGGTTGCAGAACCAAAGCCTTACATTCCCTAGCTTTAAAGTAGAGGACCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS CCA 90 bp | AACATTGCCAGGTCCTCTACTTTAAAGCTAGGGAATGTAAGGCTTTaGTTCTGCAACCTGGAAGTGGCTCAGCAGCACAGGAGTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: NIARSSTLKLGNVRL*FCNLEVAQQHRSWQ Trigger: TTGCCAACTCCTGTGCTGCTGAGCCACTTCCAGGTTGCAGAACCAAAGCCTTACATTCCCTAGCTTTAAAGTAGAGGACCTGGCAATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS TCA 90 bp | CGGGATTATAATCCCACCTACGGCCATCAACTGGCTTTTGCTGCATaGGCCACCCTAAATCTCCGTGACAACAATAAACATTCCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: RDYNPTYGHQLAFAA*ATLNLRDNNKHSSW Trigger: CCATGAGGAATGTTTATTGTTGTCACGGAGATTTAGGGTGGCTCATGCAGCAAAAGCCAGTTGATGGCCGTAGGTGGGATTATAATCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS TCA 90 bp | GACAGGGACAGGATAAGGCCCATTGGTAAGGGAAGAATGAAGGGGTaGAATAGCAGTCACATAGCTATTTTGAAACTCGGTGGAGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: DRDRIRPIGKGRMKG*NSSHIAILKLGGVN Trigger: GTTTACTCCACCGAGTTTCAAAATAGCTATGTGACTGCTATTTCACCCCTTCATTCTTCCCTTACCAATGGGCCTTATCCTGTCCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS CCA 72 bp | GGACACGGACCAGGCGAGAGCCCGCAAAGACCCAGGTaGCCCGGCGCCCCGCGTGGGCGGCGAGGACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GHGPGESPQRPR*PGAPRGRRGPG Trigger: GCCAGGTCCTCGCCGCCCACGCGGGGCGCCGGGCCACCTGGGTCTTTGCGGGCTCTCGCCTGGTCCGTGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS CCA 72 bp | CTGGCGCCCTATGCGGATGAAGGGACGGTCCCTGCATaGCTCTTGGCCACTCCAAGGCACGCTCCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LAPYADEGTVPA*LLATPRHAPFP Trigger: TGGAAAGGGAGCGTGCCTTGGAGTGGCCAAGAGCCATGCAGGGACCGTCCCTTCATCCGCATAGGGCGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS CAA 72 bp | CCCTATGCGGATGAAGGGACGGTCCCTGCATGGCTCTaGGCCACTCCAAGGCACGCTCCCTTTCCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PYADEGTVPAWL*ATPRHAPFPSG Trigger: CCCAGATGGAAAGGGAGCGTGCCTTGGAGTGGCCAAGAGCCATGCAGGGACCGTCCCTTCATCCGCATAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS CCA 72 bp | ATCCAGGCTGGGCTCAGTAATGGTCTGCGGGCCACCTaGTCTAGGCTAGGCCTGTCTAGAGCAGCTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IQAGLSNGLRAT*SRLGLSRAAWF Trigger: GAACCAAGCTGCTCTAGACAGGCCTAGCCTAGACCAGGTGGCCCGCAGACCATTACTGAGCCCAGCCTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS TCA 72 bp | CATTCCTCATGGTCTGCAGTTTGGCTGGGAGTTGGATaGTCCAGGCTGGGCTCAGTAATGGTCTGCGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HSSWSAVWLGVG*SRLGSVMVCGP Trigger: TGGCCCGCAGACCATTACTGAGCCCAGCCTGGATCATCCAACTCCCAGCCAAACTGCAGACCATGAGGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CCA 72 bp | GCCACCTGGTCTAGGCTAGGCCTGTCTAGAGCAGCTTaGTTCTGTGTTTCTCTCACCATCTTCCCAAGACCG | + |
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Preference number: 6 (lower is better) Translates to: ATWSRLGLSRAA*FCVSLTIFPRP Trigger: CGGTCTTGGGAAGATGGTGAGAGAAACACAGAACCAAGCTGCTCTAGACAGGCCTAGCCTAGACCAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CCA 72 bp | GCGCCAGTTTGGGCTACTGAGCCTGCTTTCTGCCGGTaGAAAGATTGGGAGTCTAGAAGTCCTTTGACACTT | + |
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Preference number: 6 (lower is better) Translates to: APVWATEPAFCR*KDWESRSPLTL Trigger: AAGTGTCAAAGGACTTCTAGACTCCCAATCTTTCCACCGGCAGAAAGCAGGCTCAGTAGCCCAAACTGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS CAA 72 bp | CGAGTCCAACCGCGAAAGCCTCTTTCAAACCTGTGCTaGTGTCCTCTCTGTGAACCTCTCATTGGCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RVQPRKPLSNLC*CPLCEPLIGQS Trigger: GCTTTGGCCAATGAGAGGTTCACAGAGAGGACACAAGCACAGGTTTGAAAGAGGCTTTCGCGGTTGGACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS TCA 72 bp | TCCATCTGGGAGGAGGCTTGTAGGGAGAGTAGCCTTTaGTGCTTTACTACTCCCAATGGGGAGATGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SIWEEACRESSL*CFTTPNGEMVL Trigger: AAGCACCATCTCCCCATTGGGAGTAGTAAAGCATCAAAGGCTACTCTCCCTACAAGCCTCCTCCCAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS CCA 72 bp | TGGCCAAAGAAATTCCAAGGTGAGTCTGCTAAAACTTaGGGTTGTTCAGCCCCTGAAGGAAGTGCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: WPKKFQGESAKT*GCSAPEGSAEP Trigger: GGGCTCAGCACTTCCTTCAGGGGCTGAACAACCCCAAGTTTTAGCAGACTCACCTTGGAATTTCTTTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647523.2 |
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| CDS CAA 90 bp | TTGAGGTTCTTACCAGCTACCTCTTATGTGGATGAAGGTTTTGGTTaGTGGCTAAAGGCTGGGGTGAACTGGCGCCCTATGCGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: LRFLPATSYVDEGFG*WLKAGVNWRPMRMK Trigger: CTTCATCCGCATAGGGCGCCAGTTCACCCCAGCCTTTAGCCACAAACCAAAACCTTCATCCACATAAGAGGTAGCTGGTAAGAACCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS TCA 72 bp | AGGGGGCAACCTCTGAGGCACATTTCATACAAGGCCTaGCACACGTTACACAGCAACCCAGAAAGAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: RGQPLRHISYKA*HTLHSNPERMD Trigger: ATCCATTCTTTCTGGGTTGCTGTGTAACGTGTGTCAGGCCTTGTATGAAATGTGCCTCAGAGGTTGCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647523.2 |
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| CDS CAA 72 bp | CAGGTCCTCTACTTTAAAGCTAGGGAATGTAAGGCTTaGGTTCTGCAACCTGGAAGTGGCTCAGCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: QVLYFKARECKA*VLQPGSGSAAQ Trigger: CTGTGCTGCTGAGCCACTTCCAGGTTGCAGAACCAAAGCCTTACATTCCCTAGCTTTAAAGTAGAGGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS CAA 72 bp | TTACCAGCTACCTCTTATGTGGATGAAGGTTTTGGTTaGTGGCTAAAGGCTGGGGTGAACTGGCGCCCTATG | + |
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Preference number: 6 (lower is better) Translates to: LPATSYVDEGFG*WLKAGVNWRPM Trigger: CATAGGGCGCCAGTTCACCCCAGCCTTTAGCCACAAACCAAAACCTTCATCCACATAAGAGGTAGCTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS CAA 90 bp | AAACATTGCCAGGTCCTCTACTTTAAAGCTAGGGAATGTAAGGCTTaGGTTCTGCAACCTGGAAGTGGCTCAGCAGCACAGGAGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: KHCQVLYFKARECKA*VLQPGSGSAAQELA Trigger: TGCCAACTCCTGTGCTGCTGAGCCACTTCCAGGTTGCAGAACCAAAGCCTTACATTCCCTAGCTTTAAAGTAGAGGACCTGGCAATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654965.1 ENST00000656634.1 |
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| CDS TCA 72 bp | AAAGCCTCTTTCAAACCTGTGCTTGTGTCCTCTCTGTaGACCTCTCATTGGCCAAAGCAAGACATGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KASFKPVLVSSL*TSHWPKQDMRQ Trigger: CTGCCTCATGTCTTGCTTTGGCCAATGAGAGGTTCACAGAGAGGACACAAGCACAGGTTTGAAAGAGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CCA 72 bp | CCATCTAAGGACCCCCTTCCTACTTTCTTCCAATCATaGCCTCAAGCAAGAAGTCTAGCATCTTGTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSKDPLPTFFQS*PQARSLASCEP Trigger: TGGCTCACAAGATGCTAGACTTCTTGCTTGAGGCCATGATTGGAAGAAAGTAGGAAGGGGGTCCTTAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS CAA 72 bp | CAAACCTGTGCTTGTGTCCTCTCTGTGAACCTCTCATaGGCCAAAGCAAGACATGAGGCAGAGAACATGGAT | + |
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Preference number: 6 (lower is better) Translates to: QTCACVLSVNLS*AKARHEAENMD Trigger: ATCCATGTTCTCTGCCTCATGTCTTGCTTTGGCCAATGAGAGGTTCACAGAGAGGACACAAGCACAGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS TCA 72 bp | AATCCCACCTACGGCCATCAACTGGCTTTTGCTGCATaGGCCACCCTAAATCTCCGTGACAACAATAAACAT | + |
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Preference number: 6 (lower is better) Translates to: NPTYGHQLAFAA*ATLNLRDNNKH Trigger: ATGTTTATTGTTGTCACGGAGATTTAGGGTGGCTCATGCAGCAAAAGCCAGTTGATGGCCGTAGGTGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656634.1 |
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| CDS GCA 72 bp | TGCCATGTCGCTAAGGGGGTTAAACCATTTCTTCTATaGCGTAAAGCTAAATATCAGGCGGAGAACAAAATT | + |
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Preference number: 6 (lower is better) Translates to: CHVAKGVKPFLL*RKAKYQAENKI Trigger: AATTTTGTTCTCCGCCTGATATTTAGCTTTACGGCATAGAAGAAATGGTTTAACCCCCTTAGCGACATGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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| CDS TCA 72 bp | CAGTTAGAAAGTTTTCTGGGCTTTAAGTACTTCATTTaGGGTTCTTACCAGCTACCTCTTATGTGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: QLESFLGFKYFI*GSYQLPLMWMK Trigger: CTTCATCCACATAAGAGGTAGCTGGTAAGAACCTCAAATGAAGTACTTAAAGCCCAGAAAACTTTCTAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667300.1 |
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