RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02481 (Homo sapiens)

Ensembl gene IDs: ENSG00000246526

Ensembl transcript IDs: ENST00000499502.2

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCTGGGAGCGAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTaGGTGGCCGACACCTGCCAGGCACCTCACACGCTCCGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AGSEEGGSSRCFERH*VADTCQAPHTLRCS
Trigger: ACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTCGCTCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 90 bp GGAGCGAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTaGCCGACACCTGCCAGGCACCTCACACGCTCCGCTGCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: GARKEGAAGASSATG*PTPARHLTRSAAVH
Trigger: ATGAACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTCGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp GCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTaGTGGATCCTGGGCTACACTCGAGGGGCCGTCTGTCGCATCTGC +
Preference number: 5 (lower is better)
Translates to: AVSLGFPLAPTCLGR*WILGYTRGAVCRIC
Trigger: GCAGATGCGACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp ACCAAGTTCCTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTaGTTGGGCCGGTGCTGGATCCTGGGCTACACTCGAGGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: TKFLAVSLGFPLAPT*LGRCWILGYTRGAV
Trigger: GACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAGGAACTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp GGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTGGCCGACACCTaGCAGGCACCTCACACGCTCCGCTGCAGTTCATCCTGCACTTTA +
Preference number: 5 (lower is better)
Translates to: GGSSRCFERHWVADT*QAPHTLRCSSSCTL
Trigger: TAAAGTGCAGGATGAACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 90 bp GCCAACCACCGGAGCTGGGGACGGGCAGGGAACAGAGTCCTGCTCTaGGGCCCCAGAAGGAGCAACCCTGATGACGCCTTCATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ANHRSWGRAGNRVLL*GPRRSNPDDAFISA
Trigger: GGCAGAAATGAAGGCGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCGGTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 90 bp CTACACTCGAGGGGCCGTCTGTCGCATCTGCTGAGCACAGATGTCTaGAGAAGGCCCCATCTGATCCAGATTCCAGAGGACAGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LHSRGRLSHLLSTDV*RRPHLIQIPEDRGV
Trigger: GACTCCTCTGTCCTCTGGAATCTGGATCAGATGGGGCCTTCTCCAGACATCTGTGCTCAGCAGATGCGACAGACGGCCCCTCGAGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp GGCTCCCACAGCACACCACTGTCACACTGCACTGTCACCATCCGCTaGTTCTCAATGTCCTTGACTGAACTGGTAGCTCCTCGAGGGACA +
Preference number: 5 (lower is better)
Translates to: GSHSTPLSHCTVTIR*FSMSLTELVAPRGT
Trigger: TGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGACATTGAGAAGCAGCGGATGGTGACAGTGCAGTGTGACAGTGGTGTGCTGTGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 90 bp AGAGGAGTCACTTCCAGAGCTGTTCCCATGACACTCAGGACAGGCTaGGCAGGCCAAGCCTCACCTGCCCCACTGCATAGCTTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: RGVTSRAVPMTLRTG*AGQASPAPLHSLCF
Trigger: AAAACACAAGCTATGCAGTGGGGCAGGTGAGGCTTGGCCTGCCCAGCCTGTCCTGAGTGTCATGGGAACAGCTCTGGAAGTGACTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 90 bp ACCTCTGCCTTTCTACAATGCCAGGCTGCTCACCGTCAAGCAACTTaGCGGTGTCACCGAACTCTGCACCGGTGTACTGAGGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: TSAFLQCQAAHRQAT*RCHRTLHRCTEVNS
Trigger: GCTGTTCACCTCAGTACACCGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 90 bp TCGGGGGAGGAGGGCAGCAAGAGTAGTAGTGGTCTCCTTCCTTACTaGGACCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SGEEGSKSSSGLLPY*DHALKTIHPSKPLC
Trigger: ACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAAGGAAGGAGACCACTACTACTCTTGCTGCCCTCCTCCCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp AGGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATGCCAGGCTaGTCACCGTCAAGCAACTTGGCGGTGTCACCGAACTCTGCACCG +
Preference number: 5 (lower is better)
Translates to: RDQTKVNLCLSTMPG*SPSSNLAVSPNSAP
Trigger: CGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 90 bp TTCTCAATGTCCTTGACTGAACTGGTAGCTCCTCGAGGGACAGGATaGACCAGTCACACAGCTCCTCTCCAAAGAGCTCCCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: FSMSLTELVAPRGTG*TSHTAPLQRAPSRE
Trigger: TTCTCTGCTGGGAGCTCTTTGGAGAGGAGCTGTGTGACTGGTTCATCCTGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGACATTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 90 bp ACAAAGCCAGGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATaGCAGGCTGCTCACCGTCAAGCAACTTGGCGGTGTCACCGAACT +
Preference number: 5 (lower is better)
Translates to: TKPGTKLKSTSAFLQ*QAAHRQATWRCHRT
Trigger: AGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCCTGGCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp AAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTaGCCGACACCTGCCAGGCACCTCACACGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KEGAAGASSATG*PTPARHLTRSA
Trigger: AGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp GAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTaGGTGGCCGACACCTGCCAGGCACCTCACACGCTC +
Preference number: 6 (lower is better)
Translates to: EEGGSSRCFERH*VADTCQAPHTL
Trigger: GAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp GGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTGCTaGATCCTGGGCTACACTCGAGGGGCCGTCTGTCGC +
Preference number: 6 (lower is better)
Translates to: GFPLAPTCLGRC*ILGYTRGAVCR
Trigger: GCGACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 72 bp CGGAGCTGGGGACGGGCAGGGAACAGAGTCCTGCTCTaGGGCCCCAGAAGGAGCAACCCTGATGACGCCTTC +
Preference number: 6 (lower is better)
Translates to: RSWGRAGNRVLL*GPRRSNPDDAF
Trigger: GAAGGCGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp CTCGGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTaGTGGATCCTGGGCTACACTCGAGGGGCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: LGFPLAPTCLGR*WILGYTRGAVC
Trigger: ACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp ACCACCGGAGCTGGGGACGGGCAGGGAACAGAGTCCTaGTCTGAGGCCCCAGAAGGAGCAACCCTGATGACG +
Preference number: 6 (lower is better)
Translates to: TTGAGDGQGTES*SEAPEGATLMT
Trigger: CGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCGGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp CTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTaGTTGGGCCGGTGCTGGATCCTGGGCTACACTCGA +
Preference number: 6 (lower is better)
Translates to: LAVSLGFPLAPT*LGRCWILGYTR
Trigger: TCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 90 bp AAGTTCCTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTGCTaGGGCCGGTGCTGGATCCTGGGCTACACTCGAGGGGCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: KFLAVSLGFPLAPTC*GRCWILGYTRGAVC
Trigger: ACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp CATTATCAAGGATCAAACCGGTTTGATCCAGTGCAGTaGAGGAAACGCGGGCAGGGTGGAGGGGCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: HYQGSNRFDPVQ*RKRGQGGGAWA
Trigger: AGCCCAGGCCCCTCCACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp AGGGGCCGTCTGTCGCATCTGCTGAGCACAGATGTCTaGAGAAGGCCCCATCTGATCCAGATTCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: RGRLSHLLSTDV*RRPHLIQIPED
Trigger: GTCCTCTGGAATCTGGATCAGATGGGGCCTTCTCCAGACATCTGTGCTCAGCAGATGCGACAGACGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 72 bp TCCTTGACTGAACTGGTAGCTCCTCGAGGGACAGGATaGACCAGTCACACAGCTCCTCTCCAAAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: SLTELVAPRGTG*TSHTAPLQRAP
Trigger: GGGAGCTCTTTGGAGAGGAGCTGTGTGACTGGTTCATCCTGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp TTTCTACAATGCCAGGCTGCTCACCGTCAAGCAACTTaGCGGTGTCACCGAACTCTGCACCGGTGTACTGAG +
Preference number: 6 (lower is better)
Translates to: FLQCQAAHRQAT*RCHRTLHRCTE
Trigger: CTCAGTACACCGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 90 bp GCCTTCATTTCTGCCTTCTCGGCTCCAGAACCAAGAGGGAGCCCATaGCTGGTGTTTTCGGCCCTCCAGTTTGTGGTGATTTGTTCCACA +
Preference number: 6 (lower is better)
Translates to: AFISAFSAPEPRGSP*LVFSALQFVVICST
Trigger: TGTGGAACAAATCACCACAAACTGGAGGGCCGAAAACACCAGCAATGGGCTCCCTCTTGGTTCTGGAGCCGAGAAGGCAGAAATGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 72 bp TATTTGTCGGAGGCATTATCAAGGATCAAACCGGTTTaGTCCAGTGCAGTGCAGGAAACGCGGGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: YLSEALSRIKPV*SSAVQETRAGW
Trigger: CCACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATGCCTCCGACAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp ACTAAAGTCAACCTCTGCCTTTCTACAATGCCAGGCTaGTCACCGTCAAGCAACTTGGCGGTGTCACCGAAC +
Preference number: 6 (lower is better)
Translates to: TKVNLCLSTMPG*SPSSNLAVSPN
Trigger: GTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp GGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATaGCAGGCTGCTCACCGTCAAGCAACTTGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: GTKLKSTSAFLQ*QAAHRQATWRC
Trigger: ACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CCA 72 bp GAGGGCAGCAAGAGTAGTAGTGGTCTCCTTCCTTACTaGGACCACGCTCTGAAGACCATTCATCCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: EGSKSSSGLLPY*DHALKTIHPSK
Trigger: CTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAAGGAAGGAGACCACTACTACTCTTGCTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 90 bp CACCTCACACGCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTaGAGTCCCCCTATCTCTGATCATTGTCACTGGTTCCTAGGAAAC +
Preference number: 6 (lower is better)
Translates to: HLTRSAAVHPALYLP*SPPISDHCHWFLGN
Trigger: GTTTCCTAGGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGCGTGTGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 72 bp GCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTTaGGTCCCCCTATCTCTGATCATTGTCACTGGTTCC +
Preference number: 6 (lower is better)
Translates to: APLQFILHFTYP*VPLSLIIVTGS
Trigger: GGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp CATCCAAGCAAGCCCCTTTGTCTAGCAAACACCTTCTaGTCCTTCAAGTCTCATCTGAAGCACCACCTCCTC +
Preference number: 6 (lower is better)
Translates to: HPSKPLCLANTF*SFKSHLKHHLL
Trigger: GAGGAGGTGGTGCTTCAGATGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 72 bp ATATTTGTCGGAGGCATTATCAAGGATCAAACCGGTTaGATCCAGTGCAGTGCAGGAAACGCGGGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: IFVGGIIKDQTG*IQCSAGNAGRV
Trigger: CACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATGCCTCCGACAAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 72 bp CGCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTaGAGTCCCCCTATCTCTGATCATTGTCACTGGTTC +
Preference number: 6 (lower is better)
Translates to: RSAAVHPALYLP*SPPISDHCHWF
Trigger: GAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS GCA 72 bp GGAAGAGGTTTATTCAGCCGGGAGCATCAGCAGACTTaGGTCTTAAGAGCCGAGCTCCCGGAAAAAGAAATT +
Preference number: 6 (lower is better)
Translates to: GRGLFSREHQQT*VLRAELPEKEI
Trigger: AATTTCTTTTTCCGGGAGCTCGGCTCTTAAGACGCAAGTCTGCTGATGCTCCCGGCTGAATAAACCTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 72 bp CCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTaGTCTAGCAAACACCTTCTGCTCCTTCAAGTCTCA +
Preference number: 6 (lower is better)
Translates to: PRSEDHSSKQAP*SSKHLLLLQVS
Trigger: TGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 72 bp AGGAAGAGGTTTATTCAGCCGGGAGCATCAGCAGACTaGCGTCTTAAGAGCCGAGCTCCCGGAAAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: RKRFIQPGASAD*RLKSRAPGKRN
Trigger: ATTTCTTTTTCCGGGAGCTCGGCTCTTAAGACGCAAGTCTGCTGATGCTCCCGGCTGAATAAACCTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS CAA 90 bp TTACTGGGACCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTaGTCTAGCAAACACCTTCTGCTCCTTCAAGTCTCATCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: LLGPRSEDHSSKQAP*SSKHLLLLQVSSEA
Trigger: TGCTTCAGATGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499502.2
CDS TCA 72 bp TCCTGCACTTTACTTACCCTTGAGTCCCCCTATCTCTaGTCATTGTCACTGGTTCCTAGGAAACTGACACTC +
Preference number: 6 (lower is better)
Translates to: SCTLLTLESPYL*SLSLVPRKLTL
Trigger: GAGTGTCAGTTTCCTAGGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499502.2