Pregenerated sensors for LINC02481 (Homo sapiens)
Ensembl gene IDs: ENSG00000246526Ensembl transcript IDs: ENST00000499502.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GCTGGGAGCGAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTaGGTGGCCGACACCTGCCAGGCACCTCACACGCTCCGCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: AGSEEGGSSRCFERH*VADTCQAPHTLRCS Trigger: ACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTCGCTCCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 90 bp | GGAGCGAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTaGCCGACACCTGCCAGGCACCTCACACGCTCCGCTGCAGTTCAT | + |
Preference number: 5 (lower is better) Translates to: GARKEGAAGASSATG*PTPARHLTRSAAVH Trigger: ATGAACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTCGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | GCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTaGTGGATCCTGGGCTACACTCGAGGGGCCGTCTGTCGCATCTGC | + |
Preference number: 5 (lower is better) Translates to: AVSLGFPLAPTCLGR*WILGYTRGAVCRIC Trigger: GCAGATGCGACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | ACCAAGTTCCTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTaGTTGGGCCGGTGCTGGATCCTGGGCTACACTCGAGGGGCCGTC | + |
Preference number: 5 (lower is better) Translates to: TKFLAVSLGFPLAPT*LGRCWILGYTRGAV Trigger: GACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAGGAACTTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | GGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTGGCCGACACCTaGCAGGCACCTCACACGCTCCGCTGCAGTTCATCCTGCACTTTA | + |
Preference number: 5 (lower is better) Translates to: GGSSRCFERHWVADT*QAPHTLRCSSSCTL Trigger: TAAAGTGCAGGATGAACTGCAGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 90 bp | GCCAACCACCGGAGCTGGGGACGGGCAGGGAACAGAGTCCTGCTCTaGGGCCCCAGAAGGAGCAACCCTGATGACGCCTTCATTTCTGCC | + |
Preference number: 5 (lower is better) Translates to: ANHRSWGRAGNRVLL*GPRRSNPDDAFISA Trigger: GGCAGAAATGAAGGCGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCGGTGGTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 90 bp | CTACACTCGAGGGGCCGTCTGTCGCATCTGCTGAGCACAGATGTCTaGAGAAGGCCCCATCTGATCCAGATTCCAGAGGACAGAGGAGTC | + |
Preference number: 5 (lower is better) Translates to: LHSRGRLSHLLSTDV*RRPHLIQIPEDRGV Trigger: GACTCCTCTGTCCTCTGGAATCTGGATCAGATGGGGCCTTCTCCAGACATCTGTGCTCAGCAGATGCGACAGACGGCCCCTCGAGTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | GGCTCCCACAGCACACCACTGTCACACTGCACTGTCACCATCCGCTaGTTCTCAATGTCCTTGACTGAACTGGTAGCTCCTCGAGGGACA | + |
Preference number: 5 (lower is better) Translates to: GSHSTPLSHCTVTIR*FSMSLTELVAPRGT Trigger: TGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGACATTGAGAAGCAGCGGATGGTGACAGTGCAGTGTGACAGTGGTGTGCTGTGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 90 bp | AGAGGAGTCACTTCCAGAGCTGTTCCCATGACACTCAGGACAGGCTaGGCAGGCCAAGCCTCACCTGCCCCACTGCATAGCTTGTGTTTT | + |
Preference number: 5 (lower is better) Translates to: RGVTSRAVPMTLRTG*AGQASPAPLHSLCF Trigger: AAAACACAAGCTATGCAGTGGGGCAGGTGAGGCTTGGCCTGCCCAGCCTGTCCTGAGTGTCATGGGAACAGCTCTGGAAGTGACTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 90 bp | ACCTCTGCCTTTCTACAATGCCAGGCTGCTCACCGTCAAGCAACTTaGCGGTGTCACCGAACTCTGCACCGGTGTACTGAGGTGAACAGC | + |
Preference number: 5 (lower is better) Translates to: TSAFLQCQAAHRQAT*RCHRTLHRCTEVNS Trigger: GCTGTTCACCTCAGTACACCGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 90 bp | TCGGGGGAGGAGGGCAGCAAGAGTAGTAGTGGTCTCCTTCCTTACTaGGACCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTTGT | + |
Preference number: 5 (lower is better) Translates to: SGEEGSKSSSGLLPY*DHALKTIHPSKPLC Trigger: ACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAAGGAAGGAGACCACTACTACTCTTGCTGCCCTCCTCCCCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | AGGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATGCCAGGCTaGTCACCGTCAAGCAACTTGGCGGTGTCACCGAACTCTGCACCG | + |
Preference number: 5 (lower is better) Translates to: RDQTKVNLCLSTMPG*SPSSNLAVSPNSAP Trigger: CGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 90 bp | TTCTCAATGTCCTTGACTGAACTGGTAGCTCCTCGAGGGACAGGATaGACCAGTCACACAGCTCCTCTCCAAAGAGCTCCCAGCAGAGAA | + |
Preference number: 5 (lower is better) Translates to: FSMSLTELVAPRGTG*TSHTAPLQRAPSRE Trigger: TTCTCTGCTGGGAGCTCTTTGGAGAGGAGCTGTGTGACTGGTTCATCCTGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGACATTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 90 bp | ACAAAGCCAGGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATaGCAGGCTGCTCACCGTCAAGCAACTTGGCGGTGTCACCGAACT | + |
Preference number: 5 (lower is better) Translates to: TKPGTKLKSTSAFLQ*QAAHRQATWRCHRT Trigger: AGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCCTGGCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | AAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTGGGTaGCCGACACCTGCCAGGCACCTCACACGCTCCGCT | + |
Preference number: 6 (lower is better) Translates to: KEGAAGASSATG*PTPARHLTRSA Trigger: AGCGGAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | GAGGAAGGAGGGAGCAGCAGGTGCTTCGAGCGCCACTaGGTGGCCGACACCTGCCAGGCACCTCACACGCTC | + |
Preference number: 6 (lower is better) Translates to: EEGGSSRCFERH*VADTCQAPHTL Trigger: GAGCGTGTGAGGTGCCTGGCAGGTGTCGGCCACCCAGTGGCGCTCGAAGCACCTGCTGCTCCCTCCTTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | GGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTGCTaGATCCTGGGCTACACTCGAGGGGCCGTCTGTCGC | + |
Preference number: 6 (lower is better) Translates to: GFPLAPTCLGRC*ILGYTRGAVCR Trigger: GCGACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 72 bp | CGGAGCTGGGGACGGGCAGGGAACAGAGTCCTGCTCTaGGGCCCCAGAAGGAGCAACCCTGATGACGCCTTC | + |
Preference number: 6 (lower is better) Translates to: RSWGRAGNRVLL*GPRRSNPDDAF Trigger: GAAGGCGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | CTCGGTTTCCCCTTAGCTCCCACCTGCTTGGGCCGGTaGTGGATCCTGGGCTACACTCGAGGGGCCGTCTGT | + |
Preference number: 6 (lower is better) Translates to: LGFPLAPTCLGR*WILGYTRGAVC Trigger: ACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | ACCACCGGAGCTGGGGACGGGCAGGGAACAGAGTCCTaGTCTGAGGCCCCAGAAGGAGCAACCCTGATGACG | + |
Preference number: 6 (lower is better) Translates to: TTGAGDGQGTES*SEAPEGATLMT Trigger: CGTCATCAGGGTTGCTCCTTCTGGGGCCTCAGAGCAGGACTCTGTTCCCTGCCCGTCCCCAGCTCCGGTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | CTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTaGTTGGGCCGGTGCTGGATCCTGGGCTACACTCGA | + |
Preference number: 6 (lower is better) Translates to: LAVSLGFPLAPT*LGRCWILGYTR Trigger: TCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 90 bp | AAGTTCCTCGCTGTGAGCCTCGGTTTCCCCTTAGCTCCCACCTGCTaGGGCCGGTGCTGGATCCTGGGCTACACTCGAGGGGCCGTCTGT | + |
Preference number: 6 (lower is better) Translates to: KFLAVSLGFPLAPTC*GRCWILGYTRGAVC Trigger: ACAGACGGCCCCTCGAGTGTAGCCCAGGATCCAGCACCGGCCCAAGCAGGTGGGAGCTAAGGGGAAACCGAGGCTCACAGCGAGGAACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | CATTATCAAGGATCAAACCGGTTTGATCCAGTGCAGTaGAGGAAACGCGGGCAGGGTGGAGGGGCCTGGGCT | + |
Preference number: 6 (lower is better) Translates to: HYQGSNRFDPVQ*RKRGQGGGAWA Trigger: AGCCCAGGCCCCTCCACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | AGGGGCCGTCTGTCGCATCTGCTGAGCACAGATGTCTaGAGAAGGCCCCATCTGATCCAGATTCCAGAGGAC | + |
Preference number: 6 (lower is better) Translates to: RGRLSHLLSTDV*RRPHLIQIPED Trigger: GTCCTCTGGAATCTGGATCAGATGGGGCCTTCTCCAGACATCTGTGCTCAGCAGATGCGACAGACGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 72 bp | TCCTTGACTGAACTGGTAGCTCCTCGAGGGACAGGATaGACCAGTCACACAGCTCCTCTCCAAAGAGCTCCC | + |
Preference number: 6 (lower is better) Translates to: SLTELVAPRGTG*TSHTAPLQRAP Trigger: GGGAGCTCTTTGGAGAGGAGCTGTGTGACTGGTTCATCCTGTCCCTCGAGGAGCTACCAGTTCAGTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | TTTCTACAATGCCAGGCTGCTCACCGTCAAGCAACTTaGCGGTGTCACCGAACTCTGCACCGGTGTACTGAG | + |
Preference number: 6 (lower is better) Translates to: FLQCQAAHRQAT*RCHRTLHRCTE Trigger: CTCAGTACACCGGTGCAGAGTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 90 bp | GCCTTCATTTCTGCCTTCTCGGCTCCAGAACCAAGAGGGAGCCCATaGCTGGTGTTTTCGGCCCTCCAGTTTGTGGTGATTTGTTCCACA | + |
Preference number: 6 (lower is better) Translates to: AFISAFSAPEPRGSP*LVFSALQFVVICST Trigger: TGTGGAACAAATCACCACAAACTGGAGGGCCGAAAACACCAGCAATGGGCTCCCTCTTGGTTCTGGAGCCGAGAAGGCAGAAATGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 72 bp | TATTTGTCGGAGGCATTATCAAGGATCAAACCGGTTTaGTCCAGTGCAGTGCAGGAAACGCGGGCAGGGTGG | + |
Preference number: 6 (lower is better) Translates to: YLSEALSRIKPV*SSAVQETRAGW Trigger: CCACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATGCCTCCGACAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | ACTAAAGTCAACCTCTGCCTTTCTACAATGCCAGGCTaGTCACCGTCAAGCAACTTGGCGGTGTCACCGAAC | + |
Preference number: 6 (lower is better) Translates to: TKVNLCLSTMPG*SPSSNLAVSPN Trigger: GTTCGGTGACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | GGGACCAAACTAAAGTCAACCTCTGCCTTTCTACAATaGCAGGCTGCTCACCGTCAAGCAACTTGGCGGTGT | + |
Preference number: 6 (lower is better) Translates to: GTKLKSTSAFLQ*QAAHRQATWRC Trigger: ACACCGCCAAGTTGCTTGACGGTGAGCAGCCTGGCATTGTAGAAAGGCAGAGGTTGACTTTAGTTTGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CCA 72 bp | GAGGGCAGCAAGAGTAGTAGTGGTCTCCTTCCTTACTaGGACCACGCTCTGAAGACCATTCATCCAAGCAAG | + |
Preference number: 6 (lower is better) Translates to: EGSKSSSGLLPY*DHALKTIHPSK Trigger: CTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAAGGAAGGAGACCACTACTACTCTTGCTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 90 bp | CACCTCACACGCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTaGAGTCCCCCTATCTCTGATCATTGTCACTGGTTCCTAGGAAAC | + |
Preference number: 6 (lower is better) Translates to: HLTRSAAVHPALYLP*SPPISDHCHWFLGN Trigger: GTTTCCTAGGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGCGTGTGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 72 bp | GCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTTaGGTCCCCCTATCTCTGATCATTGTCACTGGTTCC | + |
Preference number: 6 (lower is better) Translates to: APLQFILHFTYP*VPLSLIIVTGS Trigger: GGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | CATCCAAGCAAGCCCCTTTGTCTAGCAAACACCTTCTaGTCCTTCAAGTCTCATCTGAAGCACCACCTCCTC | + |
Preference number: 6 (lower is better) Translates to: HPSKPLCLANTF*SFKSHLKHHLL Trigger: GAGGAGGTGGTGCTTCAGATGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 72 bp | ATATTTGTCGGAGGCATTATCAAGGATCAAACCGGTTaGATCCAGTGCAGTGCAGGAAACGCGGGCAGGGTG | + |
Preference number: 6 (lower is better) Translates to: IFVGGIIKDQTG*IQCSAGNAGRV Trigger: CACCCTGCCCGCGTTTCCTGCACTGCACTGGATCAAACCGGTTTGATCCTTGATAATGCCTCCGACAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 72 bp | CGCTCCGCTGCAGTTCATCCTGCACTTTACTTACCCTaGAGTCCCCCTATCTCTGATCATTGTCACTGGTTC | + |
Preference number: 6 (lower is better) Translates to: RSAAVHPALYLP*SPPISDHCHWF Trigger: GAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGATGAACTGCAGCGGAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS GCA 72 bp | GGAAGAGGTTTATTCAGCCGGGAGCATCAGCAGACTTaGGTCTTAAGAGCCGAGCTCCCGGAAAAAGAAATT | + |
Preference number: 6 (lower is better) Translates to: GRGLFSREHQQT*VLRAELPEKEI Trigger: AATTTCTTTTTCCGGGAGCTCGGCTCTTAAGACGCAAGTCTGCTGATGCTCCCGGCTGAATAAACCTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 72 bp | CCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTaGTCTAGCAAACACCTTCTGCTCCTTCAAGTCTCA | + |
Preference number: 6 (lower is better) Translates to: PRSEDHSSKQAP*SSKHLLLLQVS Trigger: TGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 72 bp | AGGAAGAGGTTTATTCAGCCGGGAGCATCAGCAGACTaGCGTCTTAAGAGCCGAGCTCCCGGAAAAAGAAAT | + |
Preference number: 6 (lower is better) Translates to: RKRFIQPGASAD*RLKSRAPGKRN Trigger: ATTTCTTTTTCCGGGAGCTCGGCTCTTAAGACGCAAGTCTGCTGATGCTCCCGGCTGAATAAACCTCTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS CAA 90 bp | TTACTGGGACCACGCTCTGAAGACCATTCATCCAAGCAAGCCCCTTaGTCTAGCAAACACCTTCTGCTCCTTCAAGTCTCATCTGAAGCA | + |
Preference number: 6 (lower is better) Translates to: LLGPRSEDHSSKQAP*SSKHLLLLQVSSEA Trigger: TGCTTCAGATGAGACTTGAAGGAGCAGAAGGTGTTTGCTAGACAAAGGGGCTTGCTTGGATGAATGGTCTTCAGAGCGTGGTCCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499502.2 |
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CDS TCA 72 bp | TCCTGCACTTTACTTACCCTTGAGTCCCCCTATCTCTaGTCATTGTCACTGGTTCCTAGGAAACTGACACTC | + |
Preference number: 6 (lower is better) Translates to: SCTLLTLESPYL*SLSLVPRKLTL Trigger: GAGTGTCAGTTTCCTAGGAACCAGTGACAATGATCAGAGATAGGGGGACTCAAGGGTAAGTAAAGTGCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499502.2 |