Pregenerated sensors for LINC02474 (Homo sapiens)

Ensembl gene IDs: ENSG00000228437

Ensembl transcript IDs: ENST00000421147.5, ENST00000441160.1

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTTGAAATTGGTGAGATGTTTCTTGGGCTAGTCGGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCTCACGGAGCAAAGAGCAGGAGGA	+
Preference number: 5 (lower is better) Translates to: FEIGEMFLGLVGLRT*GRRWIFLTEQRAGG Trigger: TCCTCCTGCTCTTTGCTCCGTGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACTAGCCCAAGAAACATCTCACCAATTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421147.5
CDS TCA 90 bp	CAGATGGATGTGGTCAAAGGCAGATGCTGTGTTTACAGGTCTCACTaGATGATGATGCAAATGTCTCGGACCCTCTTGCAAAGGTCCTCC	+
Preference number: 5 (lower is better) Translates to: QMDVVKGRCCVYRSH*MMMQMSRTLLQRSS Trigger: GGAGGACCTTTGCAAGAGGGTCCGAGACATTTGCATCATCATTCAGTGAGACCTGTAAACACAGCATCTGCCTTTGACCACATCCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421147.5
CDS TCA 90 bp	AGAAGTTATTGGTGGAATACTGCAGGAGGAAGGGGATTCTCTTTCTaGTTACAGTGTGTTTGTTTCATCAACCTCCTTCAGCATACCTGG	+
Preference number: 5 (lower is better) Translates to: RSYWWNTAGGRGFSF*LQCVCFINLLQHTW Trigger: CCAGGTATGCTGAAGGAGGTTGATGAAACAAACACACTGTAATCAGAAAGAGAATCCCCTTCCTCCTGCAGTATTCCACCAATAACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CCA 90 bp	CTTGGTTCCATTCTCCCATTTCAGGGTAGGGAAAATTTCATAAAATaGATTATCTCTCAGGTTCTTCCAGATGGATGTGGTCAAAGGCAG	+
Preference number: 5 (lower is better) Translates to: LGSILPFQGRENFIK*IISQVLPDGCGQRQ Trigger: CTGCCTTTGACCACATCCATCTGGAAGAACCTGAGAGATAATCCATTTTATGAAATTTTCCCTACCCTGAAATGGGAGAATGGAACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CCA 90 bp	CTTATTTTCTTTCAGCTCCAACTCCATCCTTCATTCACTATTCTGTaGATAATGCAGCTGGACCCTGCAAATATTTCTTCTAAGTCAGCT	+
Preference number: 5 (lower is better) Translates to: LIFFQLQLHPSFTIL*IMQLDPANISSKSA Trigger: AGCTGACTTAGAAGAAATATTTGCAGGGTCCAGCTGCATTATCCACAGAATAGTGAATGAAGGATGGAGTTGGAGCTGAAAGAAAATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CAA 72 bp	CAGCCGCTAAGCCAAGAAGGAGTCAGTCAGAGAGCCTaGGGCCAGAGTTCCACGGGCTCTGGGAGTGGCAGA	+
Preference number: 6 (lower is better) Translates to: QPLSQEGVSQRA*GQSSTGSGSGR Trigger: TCTGCCACTCCCAGAGCCCGTGGAACTCTGGCCCAAGGCTCTCTGACTGACTCCTTCTTGGCTTAGCGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421147.5
CDS TCA 72 bp	CTTTCTCACGGAGCAAAGAGCAGGAGGACAGGGGATTaGTTTCCTGAGGCAGGTCCCCCGATCCGAGTCACC	+
Preference number: 6 (lower is better) Translates to: LSHGAKSRRTGD*FPEAGPPIRVT Trigger: GGTGACTCGGATCGGGGGACCTGCCTCAGGAAATCAATCCCCTGTCCTCCTGCTCTTTGCTCCGTGAGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421147.5
CDS TCA 72 bp	GGTGAGATGTTTCTTGGGCTAGTCGGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCTCACGGAGCAAAGA	+
Preference number: 6 (lower is better) Translates to: GEMFLGLVGLRT*GRRWIFLTEQR Trigger: TCTTTGCTCCGTGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACTAGCCCAAGAAACATCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421147.5 ENST00000441160.1
CDS CAA 72 bp	CACCCAGTTCTAGCAGCCCAGGAGCTTCTCCAGAACTaGGTTCCATTCTCCCATTTCAGGGTAGGGAAAATT	+
Preference number: 6 (lower is better) Translates to: HPVLAAQELLQN*VPFSHFRVGKI Trigger: AATTTTCCCTACCCTGAAATGGGAGAATGGAACCAAGTTCTGGAGAAGCTCCTGGGCTGCTAGAACTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CAA 72 bp	GTAGAGACTGTGGAGCCAAATACTTTACTGTGCCAGTaGTCAGCTTATTTTCTTTCAGCTCCAACTCCATCC	+
Preference number: 6 (lower is better) Translates to: VETVEPNTLLCQ*SAYFLSAPTPS Trigger: GGATGGAGTTGGAGCTGAAAGAAAATAAGCTGACAACTGGCACAGTAAAGTATTTGGCTCCACAGTCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CCA 72 bp	GCTGACATAATGTTAAGCTTTGTCAGTAGAAGTTATTaGTGGAATACTGCAGGAGGAAGGGGATTCTCTTTC	+
Preference number: 6 (lower is better) Translates to: ADIMLSFVSRSY*WNTAGGRGFSF Trigger: GAAAGAGAATCCCCTTCCTCCTGCAGTATTCCACCAATAACTTCTACTGACAAAGCTTAACATTATGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CCA 72 bp	TTTCAGCTCCAACTCCATCCTTCATTCACTATTCTGTaGATAATGCAGCTGGACCCTGCAAATATTTCTTCT	+
Preference number: 6 (lower is better) Translates to: FQLQLHPSFTIL*IMQLDPANISS Trigger: AGAAGAAATATTTGCAGGGTCCAGCTGCATTATCCACAGAATAGTGAATGAAGGATGGAGTTGGAGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS TCA 72 bp	ACTGAGACTGTGCATCTCCTCACTGTAAAGCAAAGCTaGGGACTTCTTTACATTTTAAGACAGCTGTATCTT	+
Preference number: 6 (lower is better) Translates to: TETVHLLTVKQS*GLLYILRQLYL Trigger: AAGATACAGCTGTCTTAAAATGTAAAGAAGTCCTCAGCTTTGCTTTACAGTGAGGAGATGCACAGTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS GCA 72 bp	GGAGTCCTTTTCAAATGGATGCCTTATCCTTCTCAGTaGTTCAAATTAGATTCTGTTCAGGCATGTTATAAC	+
Preference number: 6 (lower is better) Translates to: GVLFKWMPYPSQ*FKLDSVQACYN Trigger: GTTATAACATGCCTGAACAGAATCTAATTTGAAGCACTGAGAAGGATAAGGCATCCATTTGAAAAGGACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1
CDS CCA 72 bp	CAGAATTCATGTTGCAATATAGGAGTCCTTTTCAAATaGATGCCTTATCCTTCTCAGTGCTTCAAATTAGAT	+
Preference number: 6 (lower is better) Translates to: QNSCCNIGVLFK*MPYPSQCFKLD Trigger: ATCTAATTTGAAGCACTGAGAAGGATAAGGCATCCATTTGAAAAGGACTCCTATATTGCAACATGAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441160.1