Pregenerated sensors for LINC02472 (Homo sapiens)

Ensembl gene IDs: ENSG00000248338

Ensembl transcript IDs: ENST00000512268.1, ENST00000654464.1, ENST00000658572.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTTCCAAGGCACTTGTCACGTAAACTGAAAGATAGGTGTGCTATCTaGCTTGATACTTATGTTTCAAAGATGGCTCTCGGGTCCTTAAGG	+
Preference number: 5 (lower is better) Translates to: FPRHLSRKLKDRCAI*LDTYVSKMALGSLR Trigger: CCTTAAGGACCCGAGAGCCATCTTTGAAACATAAGTATCAAGTCAGATAGCACACCTATCTTTCAGTTTACGTGACAAGTGCCTTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654464.1 ENST00000658572.1
CDS TCA 90 bp	GGGTCCTTAAGGAAGACATCTGTGAGCTATAAAACTTGTGCTTTTTaGAGTCCTGAGTTAAATAGTACCTCCAGCTACTATTACATAATT	+
Preference number: 5 (lower is better) Translates to: GSLRKTSVSYKTCAF*SPELNSTSSYYYII Trigger: AATTATGTAATAGTAGCTGGAGGTACTATTTAACTCAGGACTTCAAAAAGCACAAGTTTTATAGCTCACAGATGTCTTCCTTAAGGACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654464.1
CDS GCA 72 bp	CCTTCTCCCACGTTCCAGCCTCTGATAGGCCCCATATaGGTTGTTCCCATCTTTGTATTCGTGAGTTCTCAT	+
Preference number: 6 (lower is better) Translates to: PSPTFQPLIGPI*VVPIFVFVSSH Trigger: ATGAGAACTCACGAATACAAAGATGGGAACAACGCATATGGGGCCTATCAGAGGCTGGAACGTGGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512268.1
CDS CCA 72 bp	ATGTCAGTGGAATTAGAATCAGGCAAACGCTGGCCCTaGATGATGGATGTACAGGATCTTTGTGGTAAACAC	+
Preference number: 6 (lower is better) Translates to: MSVELESGKRWP*MMDVQDLCGKH Trigger: GTGTTTACCACAAAGATCCTGTACATCCATCATCCAGGGCCAGCGTTTGCCTGATTCTAATTCCACTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512268.1 ENST00000654464.1 ENST00000658572.1
CDS CAA 90 bp	ACAATACCAGCTTATGAAACTCTCAGAGGTGAAATTCATGTCCATTaGTCAACTTGTTGCCTGATTCTCTCCCTTCTCCCACGTTCCAGC	+
Preference number: 6 (lower is better) Translates to: TIPAYETLRGEIHVH*STCCLILSLLPRSS Trigger: GCTGGAACGTGGGAGAAGGGAGAGAATCAGGCAACAAGTTGACAAATGGACATGAATTTCACCTCTGAGAGTTTCATAAGCTGGTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512268.1
CDS CCA 72 bp	ATTTCAATGTCAGTGGAATTAGAATCAGGCAAACGCTaGCCCTGGATGATGGATGTACAGGATCTTTGTGGT	+
Preference number: 6 (lower is better) Translates to: ISMSVELESGKR*PWMMDVQDLCG Trigger: ACCACAAAGATCCTGTACATCCATCATCCAGGGCCAGCGTTTGCCTGATTCTAATTCCACTGACATTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512268.1 ENST00000654464.1 ENST00000658572.1
CDS TCA 72 bp	CACTTGTCACGTAAACTGAAAGATAGGTGTGCTATCTaGCTTGATACTTATGTTTCAAAGATGGCTCTCGGG	+
Preference number: 6 (lower is better) Translates to: HLSRKLKDRCAI*LDTYVSKMALG Trigger: CCCGAGAGCCATCTTTGAAACATAAGTATCAAGTCAGATAGCACACCTATCTTTCAGTTTACGTGACAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654464.1 ENST00000658572.1
CDS TCA 72 bp	AATAGGTCGTATTTCCAAGGCACTTGTCACGTAAACTaGAAGATAGGTGTGCTATCTGACTTGATACTTATG	+
Preference number: 6 (lower is better) Translates to: NRSYFQGTCHVN*KIGVLSDLILM Trigger: CATAAGTATCAAGTCAGATAGCACACCTATCTTTCAGTTTACGTGACAAGTGCCTTGGAAATACGACCTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654464.1 ENST00000658572.1
CDS TCA 72 bp	TTCGTGAGTTCTCATCATTTAGTTCCCACTTATAAGTaGGAACGTGCAGTATTTGGTTTTCTGTTTCTTACA	+
Preference number: 6 (lower is better) Translates to: FVSSHHLVPTYK*ERAVFGFLFLT Trigger: TGTAAGAAACAGAAAACCAAATACTGCACGTTCTCACTTATAAGTGGGAACTAAATGATGAGAACTCACGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512268.1

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