Pregenerated sensors for LINC02471 (Homo sapiens)
Ensembl gene IDs: ENSG00000223914Ensembl transcript IDs: ENST00000417422.2, ENST00000641941.1, ENST00000661406.1, ENST00000663154.1, ENST00000669755.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGACAAACAGCTTCCCCCAGAACATGAGAAAACCACGGCCGCCTaGTCCTTGTTGGCTGGTGGAGTGAAACAGACTTTACAGTACACT | + |
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Preference number: 5 (lower is better) Translates to: TDKQLPPEHEKTTAA*SLLAGGVKQTLQYT Trigger: AGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGGGGGAAGCTGTTTGTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS TCA 90 bp | AACATGAGAAAACCACGGCCGCCTGCTCCTTGTTGGCTGGTGGAGTaGAACAGACTTTACAGTACACTGGATCAGCTAAACTGTGAATTA | + |
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Preference number: 5 (lower is better) Translates to: NMRKPRPPAPCWLVE*NRLYSTLDQLNCEL Trigger: TAATTCACAGTTTAGCTGATCCAGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | GTACTGGAAGAAATAAGAGTTAAACATGAAGTTCAAGGTGGGGAGTaGAGAAATGGGTGCAGGGAAGTCACCAACGTCCAGGACACTGAT | + |
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Preference number: 5 (lower is better) Translates to: VLEEIRVKHEVQGGE*RNGCREVTNVQDTD Trigger: ATCAGTGTCCTGGACGTTGGTGACTTCCCTGCACCCATTTCTTCACTCCCCACCTTGAACTTCATGTTTAACTCTTATTTCTTCCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | AGTTCACAGTTTTGCTGGAGTTGCTGGTATAACTTGGCAAGTCTTTaGTTTCAATTGTATCAGTCAGGTAGGAGCCATCACACCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSQFCWSCWYNLASL*FQLYQSGRSHHTLW Trigger: CCAGAGGGTGTGATGGCTCCTACCTGACTGATACAATTGAAATCAAAGACTTGCCAAGTTATACCAGCAACTCCAGCAAAACTGTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000661406.1 |
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| CDS GCA 90 bp | GTTAATTTCCAAATGCTTCTAGAAGCTGGTACCCATTTTAGCTTGTaGCTGAGGGAAGTGGTTGTGATCTTTGCCCATCTGCAGTATCTC | + |
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Preference number: 5 (lower is better) Translates to: VNFQMLLEAGTHFSL*LREVVVIFAHLQYL Trigger: GAGATACTGCAGATGGGCAAAGATCACAACCACTTCCCTCAGGCACAAGCTAAAATGGGTACCAGCTTCTAGAAGCATTTGGAAATTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | TCACACACCCACCTTTTCCATGATAGTCCCTGGGCCTTGAGGAGTTaGATAGCTTTAATTTCTGGCTCTATGTTTCAGGAATGCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SHTHLFHDSPWALRS*IALISGSMFQECSL Trigger: TAAACTGCATTCCTGAAACATAGAGCCAGAAATTAAAGCTATTCAACTCCTCAAGGCCCAGGGACTATCATGGAAAAGGTGGGTGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 90 bp | CAGGGGTGGCAGCAGTGGAAGAAACTTTGCATAGAAGTGAACCTGTaGAGCTCAAACCTGTATTGTTCACTGCAATTATTTCTAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: QGWQQWKKLCIEVNL*SSNLYCSLQLFLRR Trigger: TCTTCTTAGAAATAATTGCAGTGAACAATACAGGTTTGAGCTGCACAGGTTCACTTCTATGCAAAGTTTCTTCCACTGCTGCCACCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 90 bp | ACGTTTATGTTTCTTGCCCGAGATTTATGGGGCTTGAGAACAAGATaGCTTCCTGGCATTTGTTATTCTAAGGCCTGTCCTATTTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TFMFLARDLWGLRTR*LPGICYSKACPILK Trigger: TTTCAAAATAGGACAGGCCTTAGAATAACAAATGCCAGGAAGGCATCTTGTTCTCAAGCCCCATAAATCTCGGGCAAGAAACATAAACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 90 bp | CCATCTGCAGTATCTCCAATCCTGTATCTAACATTATTAACATCTTaGGCCATCTGGCCAAATCTTTACATAAGGAAATCGAGAAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PSAVSPILYLTLLTS*AIWPNLYIRKSRSS Trigger: GCTACTTCTCGATTTCCTTATGTAAAGATTTGGCCAGATGGCCCAAGATGTTAATAATGTTAGATACAGGATTGGAGATACTGCAGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | CACAGGTGGGTGAGAGACAAAAATGGTTGCATTCTTTTGAGTTTCTaGTTAGTCTTTCCAAAGGAGGCAATCAGTTATGCATTTATCTCA | + |
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Preference number: 5 (lower is better) Translates to: HRWVRDKNGCILLSF*LVFPKEAISYAFIS Trigger: TGAGATAAATGCATAACTGATTGCCTCCTTTGGAAAGACTAATCAGAAACTCAAAAGAATGCAACCATTTTTGTCTCTCACCCACCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | GGATATTTGTTCTCTGTATATTTCCTTCCACTTCCTATTTGTAACTaGTTATCCATGACGTTTATGTTTCTTGCCCGAGATTTATGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GYLFSVYFLPLPICN*LSMTFMFLARDLWG Trigger: GCCCCATAAATCTCGGGCAAGAAACATAAACGTCATGGATAATCAGTTACAAATAGGAAGTGGAAGGAAATATACAGAGAACAAATATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 90 bp | ATAGCTTTAATTTCTGGCTCTATGTTTCAGGAATGCAGTTTATTTTaGTTGACATCTTGTACTGGGCCTGAAGATGGGGCTTTAATTGCT | + |
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Preference number: 5 (lower is better) Translates to: IALISGSMFQECSLF*LTSCTGPEDGALIA Trigger: AGCAATTAAAGCCCCATCTTCAGGCCCAGTACAAGATGTCAATCAAAATAAACTGCATTCCTGAAACATAGAGCCAGAAATTAAAGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 90 bp | GTATCTCCAATCCTGTATCTAACATTATTAACATCTTGGGCCATCTaGCCAAATCTTTACATAAGGAAATCGAGAAGTAGCAGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSPILYLTLLTSWAI*PNLYIRKSRSSRIL Trigger: CAAAATCCTGCTACTTCTCGATTTCCTTATGTAAAGATTTGGCCAGATGGCCCAAGATGTTAATAATGTTAGATACAGGATTGGAGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 72 bp | CAGCTTCCCCCAGAACATGAGAAAACCACGGCCGCCTaGTCCTTGTTGGCTGGTGGAGTGAAACAGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: QLPPEHEKTTAA*SLLAGGVKQTL Trigger: TAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGGGGGAAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS CAA 72 bp | CCCCCAGAACATGAGAAAACCACGGCCGCCTGCTCCTaGTTGGCTGGTGGAGTGAAACAGACTTTACAGTAC | + |
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Preference number: 6 (lower is better) Translates to: PPEHEKTTAACS*LAGGVKQTLQY Trigger: GTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS CAA 90 bp | CAGCTTCCCCCAGAACATGAGAAAACCACGGCCGCCTGCTCCTTGTaGGCTGGTGGAGTGAAACAGACTTTACAGTACACTGGATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QLPPEHEKTTAACSL*AGGVKQTLQYTGSA Trigger: AGCTGATCCAGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGGGGGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS TCA 72 bp | AGGCCAAAGTGTGAGGATTGTCTGGGTCCAGTAGTTTaGGATGAGTCTGGGCAACATGGCGAGAGTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RPKCEDCLGPVV*DESGQHGESPS Trigger: CGAAGGACTCTCGCCATGTTGCCCAGACTCATCTCAAACTACTGGACCCAGACAATCCTCACACTTTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417422.2 |
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| CDS CAA 90 bp | AAACAGCTTCCCCCAGAACATGAGAAAACCACGGCCGCCTGCTCCTaGTTGGCTGGTGGAGTGAAACAGACTTTACAGTACACTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: KQLPPEHEKTTAACS*LAGGVKQTLQYTGS Trigger: TGATCCAGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGGGGGAAGCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS TCA 72 bp | AAACCACGGCCGCCTGCTCCTTGTTGGCTGGTGGAGTaGAACAGACTTTACAGTACACTGGATCAGCTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KPRPPAPCWLVE*NRLYSTLDQLN Trigger: GTTTAGCTGATCCAGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS CCA 72 bp | CCCCTTATAAAATCATCAGATCCTGGCCGGGCGCTGTaGCTCAGTACAGTTTATTCGCCTGTAATCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PLIKSSDPGRAL*LSTVYSPVIPA Trigger: TGCTGGGATTACAGGCGAATAAACTGTACTGAGCCACAGCGCCCGGCCAGGATCTGATGATTTTATAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000661406.1 |
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| CDS CAA 72 bp | CCAGAACATGAGAAAACCACGGCCGCCTGCTCCTTGTaGGCTGGTGGAGTGAAACAGACTTTACAGTACACT | + |
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Preference number: 6 (lower is better) Translates to: PEHEKTTAACSL*AGGVKQTLQYT Trigger: AGTGTACTGTAAAGTCTGTTTCACTCCACCAGCCAACAAGGAGCAGGCGGCCGTGGTTTTCTCATGTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000663154.1 |
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| CDS TCA 72 bp | CTGCAACTGCAGATCTCAGACTCTGGCTCTGTCACATaGAAAAAGTCTTCTGTGTGCTCACTGCGTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LQLQISDSGSVT*KKSSVCSLRQH Trigger: ATGCTGACGCAGTGAGCACACAGAAGACTTTTTTCATGTGACAGAGCCAGAGTCTGAGATCTGCAGTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669755.1 |
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| CDS GCA 72 bp | TTGCTGTCTCAGGGGTGGCAGCAGTGGAAGAAACTTTaGATAGAAGTGAACCTGTGCAGCTCAAACCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LLSQGWQQWKKL*IEVNLCSSNLY Trigger: ATACAGGTTTGAGCTGCACAGGTTCACTTCTATGCAAAGTTTCTTCCACTGCTGCCACCCCTGAGACAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 72 bp | CAATTGTATCAGTCAGGTAGGAGCCATCACACCCTCTaGCCATCTGCCAGGAAAAGAGACAAGACTCAACAT | + |
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Preference number: 6 (lower is better) Translates to: QLYQSGRSHHTL*PSARKRDKTQH Trigger: ATGTTGAGTCTTGTCTCTTTTCCTGGCAGATGGCCAGAGGGTGTGATGGCTCCTACCTGACTGATACAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661406.1 |
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| CDS GCA 72 bp | TGCTTCCTTTGTTGCAATATCAGACATCCCCGTGATTaGAGCAGCTCCAGCCCACTTCTGTGTAAAATAAGG | + |
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Preference number: 6 (lower is better) Translates to: CFLCCNIRHPRD*SSSSPLLCKIR Trigger: CCTTATTTTACACAGAAGTGGGCTGGAGCTGCTGCAATCACGGGGATGTCTGATATTGCAACAAAGGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 72 bp | CAAATGCTTCTAGAAGCTGGTACCCATTTTAGCTTGTaGCTGAGGGAAGTGGTTGTGATCTTTGCCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: QMLLEAGTHFSL*LREVVVIFAHL Trigger: CAGATGGGCAAAGATCACAACCACTTCCCTCAGGCACAAGCTAAAATGGGTACCAGCTTCTAGAAGCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | GAAATAAGAGTTAAACATGAAGTTCAAGGTGGGGAGTaGAGAAATGGGTGCAGGGAAGTCACCAACGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EIRVKHEVQGGE*RNGCREVTNVQ Trigger: CTGGACGTTGGTGACTTCCCTGCACCCATTTCTTCACTCCCCACCTTGAACTTCATGTTTAACTCTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 72 bp | TTTCTTGCCCGAGATTTATGGGGCTTGAGAACAAGATaGCTTCCTGGCATTTGTTATTCTAAGGCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLARDLWGLRTR*LPGICYSKACP Trigger: AGGACAGGCCTTAGAATAACAAATGCCAGGAAGGCATCTTGTTCTCAAGCCCCATAAATCTCGGGCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | TTCCAAATGCTTCTAGAAGCTGGTACCCATTTTAGCTaGTGCCTGAGGGAAGTGGTTGTGATCTTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FQMLLEAGTHFS*CLREVVVIFAH Trigger: ATGGGCAAAGATCACAACCACTTCCCTCAGGCACAAGCTAAAATGGGTACCAGCTTCTAGAAGCATTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 72 bp | GATAGTGCCACTGCATTCTGGATTCCAGCATGGAAGTaGATCATCATAAACGTCTTTATCCTTAGTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DSATAFWIPAWK*IIINVFILSVS Trigger: GGAGACACTAAGGATAAAGACGTTTATGATGATCCACTTCCATGCTGGAATCCAGAATGCAGTGGCACTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 90 bp | GATGTTAATTTCCAAATGCTTCTAGAAGCTGGTACCCATTTTAGCTaGTGCCTGAGGGAAGTGGTTGTGATCTTTGCCCATCTGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: DVNFQMLLEAGTHFS*CLREVVVIFAHLQY Trigger: ATACTGCAGATGGGCAAAGATCACAACCACTTCCCTCAGGCACAAGCTAAAATGGGTACCAGCTTCTAGAAGCATTTGGAAATTAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | CACCTTTTCCATGATAGTCCCTGGGCCTTGAGGAGTTaGATAGCTTTAATTTCTGGCTCTATGTTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HLFHDSPWALRS*IALISGSMFQE Trigger: TTCCTGAAACATAGAGCCAGAAATTAAAGCTATTCAACTCCTCAAGGCCCAGGGACTATCATGGAAAAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | CTCTCCCAAGGTAAGATCCATTTAAAGCCAAGAGATTaGGAAAAGTGCGTCATCATGGCCTCCTACCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LSQGKIHLKPRD*EKCVIMASYLN Trigger: ATTAAGGTAGGAGGCCATGATGACGCACTTTTCTCAATCTCTTGGCTTTAAATGGATCTTACCTTGGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661406.1 |
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| CDS CAA 72 bp | AGTTATGCATTTATCTCAGTGAGCAAAGGGAATACTTaGAATAGCATGGGAGGCAGGTTTGCCCTAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SYAFISVSKGNT*NSMGGRFALSS Trigger: ACTGCTTAGGGCAAACCTGCCTCCCATGCTATTCAAAGTATTCCCTTTGCTCACTGAGATAAATGCATAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | TTTTGCTGGAGTTGCTGGTATAACTTGGCAAGTCTTTaGTTTCAATTGTATCAGTCAGGTAGGAGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: FCWSCWYNLASL*FQLYQSGRSHH Trigger: GTGATGGCTCCTACCTGACTGATACAATTGAAATCAAAGACTTGCCAAGTTATACCAGCAACTCCAGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000661406.1 |
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| CDS TCA 72 bp | ATTTCTGGCTCTATGTTTCAGGAATGCAGTTTATTTTaGTTGACATCTTGTACTGGGCCTGAAGATGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ISGSMFQECSLF*LTSCTGPEDGA Trigger: AGCCCCATCTTCAGGCCCAGTACAAGATGTCAATCAAAATAAACTGCATTCCTGAAACATAGAGCCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | CCTTTGTTATATTTGCACTTTTCCCGTTTAGGTGAATaGAATTTGGGCTCCCTAATAGGGACTGCTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLYLHFSRLGE*NLGSLIGTAEE Trigger: CTCTTCAGCAGTCCCTATTAGGGAGCCCAAATTCAATTCACCTAAACGGGAAAAGTGCAAATATAACAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | GCTTCCAGGTCACAGGTGGGTGAGAGACAAAAATGGTaGCATTCTTTTGAGTTTCTGATTAGTCTTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ASRSQVGERQKW*HSFEFLISLSK Trigger: TTTGGAAAGACTAATCAGAAACTCAAAAGAATGCAACCATTTTTGTCTCTCACCCACCTGTGACCTGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | AAACAGACTTTACAGTACACTGGATCAGCTAAACTGTaGATTACAGGTGAACCAAAGCCATTCTGTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: KQTLQYTGSAKL*ITGEPKPFCQS Trigger: TGACTGACAGAATGGCTTTGGTTCACCTGTAATTCACAGTTTAGCTGATCCAGTGTACTGTAAAGTCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | TTGCATAGAAGTGAACCTGTGCAGCTCAAACCTGTATaGTTCACTGCAATTATTTCTAAGAAGATGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LHRSEPVQLKPV*FTAIISKKMRQ Trigger: CTGCCTCATCTTCTTAGAAATAATTGCAGTGAACAATACAGGTTTGAGCTGCACAGGTTCACTTCTATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 90 bp | GAAGAAACTTTGCATAGAAGTGAACCTGTGCAGCTCAAACCTGTATaGTTCACTGCAATTATTTCTAAGAAGATGAGGCAGTGTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: EETLHRSEPVQLKPV*FTAIISKKMRQCLA Trigger: TGCTAAACACTGCCTCATCTTCTTAGAAATAATTGCAGTGAACAATACAGGTTTGAGCTGCACAGGTTCACTTCTATGCAAAGTTTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | ATTTCCTTCCACTTCCTATTTGTAACTGATTATCCATaGCGTTTATGTTTCTTGCCCGAGATTTATGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ISFHFLFVTDYP*RLCFLPEIYGA Trigger: AGCCCCATAAATCTCGGGCAAGAAACATAAACGTCATGGATAATCAGTTACAAATAGGAAGTGGAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | ACTATATTTTCCTTGTTCTGTAATGTGCAAGAGTGCTaGCCACTAGGTCCTCATGACAAAATTCATATACAC | + |
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Preference number: 6 (lower is better) Translates to: TIFSLFCNVQEC*PLGPHDKIHIH Trigger: GTGTATATGAATTTTGTCATGAGGACCTAGTGGTCAGCACTCTTGCACATTACAGAACAAGGAAAATATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641941.1 ENST00000661406.1 |
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| CDS TCA 72 bp | ATTCCAGTCAATGTCTACCTGTTCACAGAAGCTGGATaGACAAGACATTATGATTCAGCTGACTTTATATTC | + |
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Preference number: 6 (lower is better) Translates to: IPVNVYLFTEAG*TRHYDSADFIF Trigger: GAATATAAAGTCAGCTGAATCATAATGTCTTGTTCATCCAGCTTCTGTGAACAGGTAGACATTGACTGGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | TACCGGAATCATGTTTGCACAACTGAGTGTACTATATaGCTGAGATCTGATCCTGCTACTAAGATTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: YRNHVCTTECTI*LRSDPATKIFL Trigger: AAGAAAAATCTTAGTAGCAGGATCAGATCTCAGTCATATAGTACACTCAGTTGTGCAAACATGATTCCGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | GTGAGAGACAAAAATGGTTGCATTCTTTTGAGTTTCTaGTTAGTCTTTCCAAAGGAGGCAATCAGTTATGCA | + |
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Preference number: 6 (lower is better) Translates to: VRDKNGCILLSF*LVFPKEAISYA Trigger: TGCATAACTGATTGCCTCCTTTGGAAAGACTAATCAGAAACTCAAAAGAATGCAACCATTTTTGTCTCTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 72 bp | ATCCTGTATCTAACATTATTAACATCTTGGGCCATCTaGCCAAATCTTTACATAAGGAAATCGAGAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ILYLTLLTSWAI*PNLYIRKSRSS Trigger: GCTACTTCTCGATTTCCTTATGTAAAGATTTGGCCAGATGGCCCAAGATGTTAATAATGTTAGATACAGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CCA 72 bp | GTATCTCCAATCCTGTATCTAACATTATTAACATCTTaGGCCATCTGGCCAAATCTTTACATAAGGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: VSPILYLTLLTS*AIWPNLYIRKS Trigger: CGATTTCCTTATGTAAAGATTTGGCCAGATGGCCCAAGATGTTAATAATGTTAGATACAGGATTGGAGATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | CAACATCATAGGTTGAAATCAACTCAGGATATGGAGTaGCGATCATGTCATCAGATGTTAACTTTAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QHHRLKSTQDME*RSCHQMLTLGK Trigger: CTTACCTAAAGTTAACATCTGATGACATGATCGCAACTCCATATCCTGAGTTGATTTCAACCTATGATGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417422.2 ENST00000663154.1 ENST00000669755.1 |
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| CDS CAA 72 bp | TTATATTTGCACTTTTCCCGTTTAGGTGAATTGAATTaGGGCTCCCTAATAGGGACTGCTGAAGAGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: LYLHFSRLGELN*GSLIGTAEEFI Trigger: TATAAACTCTTCAGCAGTCCCTATTAGGGAGCCCAAATTCAATTCACCTAAACGGGAAAAGTGCAAATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS TCA 72 bp | GGAATCATGTTTGCACAACTGAGTGTACTATATGACTaGGATCTGATCCTGCTACTAAGATTTTTCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: GIMFAQLSVLYD*DLILLLRFFLM Trigger: CATTAAGAAAAATCTTAGTAGCAGGATCAGATCTCAGTCATATAGTACACTCAGTTGTGCAAACATGATTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS GCA 72 bp | TTTCTGATTAGTCTTTCCAAAGGAGGCAATCAGTTATaGATTTATCTCAGTGAGCAAAGGGAATACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FLISLSKGGNQL*IYLSEQREYFE Trigger: TTCAAAGTATTCCCTTTGCTCACTGAGATAAATGCATAACTGATTGCCTCCTTTGGAAAGACTAATCAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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| CDS CAA 72 bp | AGTATCTCCAATCCTGTATCTAACATTATTAACATCTaGGGCCATCTGGCCAAATCTTTACATAAGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: SISNPVSNIINI*GHLAKSLHKEI Trigger: GATTTCCTTATGTAAAGATTTGGCCAGATGGCCCAAGATGTTAATAATGTTAGATACAGGATTGGAGATACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641941.1 |
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