Pregenerated sensors for LINC02470 (Homo sapiens)
Ensembl gene IDs: ENSG00000225231Ensembl transcript IDs: ENST00000412084.1, ENST00000655933.1, ENST00000663603.1, ENST00000667501.1, ENST00000670937.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCACAGCAACCTAGCATCCTCCACTCAGCCGCGCAGGTGGACTTaGGCCAGATGGCCCCCAGGGGCGTGTCATGTGCCTTCTCTGACG | + |
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Preference number: 5 (lower is better) Translates to: QHSNLASSTQPRRWT*ARWPPGACHVPSLT Trigger: CGTCAGAGAAGGCACATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTTGCTGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS CCA 90 bp | GAGAAACAGCACAGCAACCTAGCATCCTCCACTCAGCCGCGCAGGTaGACTTGGGCCAGATGGCCCCCAGGGGCGTGTCATGTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: EKQHSNLASSTQPRR*TWARWPPGACHVPS Trigger: AGAAGGCACATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTTGCTGTGCTGTTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS TCA 90 bp | TATTTGGTGAGTGCAAACCGCAGGAAACTGACGACCCGGTTTTTCTaGGGGGTGGTGCGGCAGCAAGACAGTAGGAGAAACAGCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: YLVSANRRKLTTRFF*GVVRQQDSRRNSTA Trigger: TGCTGTGCTGTTTCTCCTACTGTCTTGCTGCCGCACCACCCCTCAGAAAAACCGGGTCGTCAGTTTCCTGCGGTTTGCACTCACCAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS CCA 90 bp | GAGACCCGTGTAAGTATTAGCTGGAATCTAAACCCCATAGGTTTGTaGGAATCCGGAGAACTCTCCATGATTTCTTCAAGTCACCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: ETRVSISWNLNPIGL*ESGELSMISSSHQG Trigger: GCCCTGGTGACTTGAAGAAATCATGGAGAGTTCTCCGGATTCCCACAAACCTATGGGGTTTAGATTCCAGCTAATACTTACACGGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412084.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CCA 90 bp | ACCCTCACGAGGAAGGCTCATCCTTCTGTGTGTGATCACAGAGGCTaGAATAATCCTGCGGGTGAATTGCAAATTGCTAAGTATATTTGG | + |
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Preference number: 5 (lower is better) Translates to: TLTRKAHPSVCDHRG*NNPAGELQIAKYIW Trigger: CCAAATATACTTAGCAATTTGCAATTCACCCGCAGGATTATTCCAGCCTCTGTGATCACACACAGAAGGATGAGCCTTCCTCGTGAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS GCA 90 bp | AAACACGTGCAGTGTGGAAGGAGTAGAGGAAGTGAAACAAGCTGTTaGTCTCCTCCTATCTTTCTCCAAATTTTACCTCAGGACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: KHVQCGRSRGSETSC*SPPIFLQILPQDPD Trigger: ATCAGGGTCCTGAGGTAAAATTTGGAGAAAGATAGGAGGAGAGCAACAGCTTGTTTCACTTCCTCTACTCCTTCCACACTGCACGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS TCA 90 bp | TCCCTCATTTTAGATAGATTGACTGGCTGCTTCTTTTCTGTTCCTTaGATATTCCAGACATTCACTGGCCTTAAGACACACGCTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLILDRLTGCFFSVP*IFQTFTGLKTHAPA Trigger: GGCTGGAGCGTGTGTCTTAAGGCCAGTGAATGTCTGGAATATTCAAGGAACAGAAAAGAAGCAGCCAGTCAATCTATCTAAAATGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS GCA 90 bp | CTTCTGTGTGTGATCACAGAGGCTGGAATAATCCTGCGGGTGAATTaGAAATTGCTAAGTATATTTGGTGAGTGCAAACCGCAGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: LLCVITEAGIILRVN*KLLSIFGECKPQET Trigger: AGTTTCCTGCGGTTTGCACTCACCAAATATACTTAGCAATTTGCAATTCACCCGCAGGATTATTCCAGCCTCTGTGATCACACACAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS GCA 90 bp | AAAACAAAAGGCAAGGTCCCAGGTCCAAAGAGGAAAGGATCAAACTaGTTAGACTTGCATCCAGTTCAGGATAAAGGGAACACTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: KTKGKVPGPKRKGSN*LDLHPVQDKGNTCD Trigger: GTCACAAGTGTTCCCTTTATCCTGAACTGGATGCAAGTCTAAGCAGTTTGATCCTTTCCTCTTTGGACCTGGGACCTTGCCTTTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS TCA 90 bp | TTATCTCTTCCCCTAGCATGTAAACTCCACAAGGGCAAAGATCTTTaGTTCTTTGGTTTGCTAATGTATTACACCCTAGGAGTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LSLPLACKLHKGKDL*FFGLLMYYTLGVCL Trigger: CAGGCACACTCCTAGGGTGTAATACATTAGCAAACCAAAGAATCAAAGATCTTTGCCCTTGTGGAGTTTACATGCTAGGGGAAGAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS GCA 90 bp | AGCACAAAACTCGATTCTTTCACAATTGCTGAATGTAGCTCCATCTaGCCACATCCACGTTTTGTTTGCATTGTGCTTGCTCAGTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: STKLDSFTIAECSSI*PHPRFVCIVLAQFK Trigger: TTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAATTGTGAAAGAATCGAGTTTTGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS TCA 90 bp | CAGTTACTGCAAAGGCCGTATAACATGATTCCCTCCGTTTACATTTaGGACTCAGTAGCCAACCTCATCACAGCAAAGATTATGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: QLLQRPYNMIPSVYI*DSVANLITAKIMIL Trigger: AAGAATCATAATCTTTGCTGTGATGAGGTTGGCTACTGAGTCTCAAATGTAAACGGAGGGAATCATGTTATACGGCCTTTGCAGTAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS TCA 90 bp | CTGCAGTTTTCTCAGCCATTGATCCACGTTGTTTCATGTTCAGATTaGAAGAAGCAATTATTATTGATTCAGTTCCAGCCTTGTGGACAC | + |
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Preference number: 5 (lower is better) Translates to: LQFSQPLIHVVSCSD*KKQLLLIQFQPCGH Trigger: GTGTCCACAAGGCTGGAACTGAATCAATAATAATTGCTTCTTTCAATCTGAACATGAAACAACGTGGATCAATGGCTGAGAAAACTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 72 bp | CAACCTAGCATCCTCCACTCAGCCGCGCAGGTGGACTaGGGCCAGATGGCCCCCAGGGGCGTGTCATGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPSILHSAAQVD*GQMAPRGVSCA Trigger: GGCACATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412084.1 ENST00000663603.1 |
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| CDS CCA 72 bp | AACCTAGCATCCTCCACTCAGCCGCGCAGGTGGACTTaGGCCAGATGGCCCCCAGGGGCGTGTCATGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NLASSTQPRRWT*ARWPPGACHVP Trigger: AGGCACATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412084.1 ENST00000663603.1 |
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| CDS CCA 72 bp | CACAGCAACCTAGCATCCTCCACTCAGCCGCGCAGGTaGACTTGGGCCAGATGGCCCCCAGGGGCGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HSNLASSTQPRR*TWARWPPGACH Trigger: ATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTTGCTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000412084.1 ENST00000663603.1 |
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| CDS CAA 90 bp | ACAGCACAGCAACCTAGCATCCTCCACTCAGCCGCGCAGGTGGACTaGGGCCAGATGGCCCCCAGGGGCGTGTCATGTGCCTTCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TAQQPSILHSAAQVD*GQMAPRGVSCAFSD Trigger: GTCAGAGAAGGCACATGACACGCCCCTGGGGGCCATCTGGCCCAAGTCCACCTGCGCGGCTGAGTGGAGGATGCTAGGTTGCTGTGCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS TCA 72 bp | AGTGCAAACCGCAGGAAACTGACGACCCGGTTTTTCTaGGGGGTGGTGCGGCAGCAAGACAGTAGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SANRRKLTTRFF*GVVRQQDSRRN Trigger: GTTTCTCCTACTGTCTTGCTGCCGCACCACCCCTCAGAAAAACCGGGTCGTCAGTTTCCTGCGGTTTGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS CAA 90 bp | AAGCCAAAGAGAAGGGCCTTAAAAGAAACCAACCCTACTAACACCTaGATCCTGGACTTAACGGCCCCCAGAGCTGTCTTTGAGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: KPKRRALKETNPTNT*ILDLTAPRAVFEPP Trigger: GGGTGGCTCAAAGACAGCTCTGGGGGCCGTTAAGTCCAGGATCAAGGTGTTAGTAGGGTTGGTTTCTTTTAAGGCCCTTCTCTTTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS GCA 72 bp | GAGATGATCATTATTTTCCTTTCTGGCGTGTTGGTCTaGTGCTCCACAACCTCCGTCCCATCCTTACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EMIIIFLSGVLV*CSTTSVPSLLS Trigger: GGAGAGTAAGGATGGGACGGAGGTTGTGGAGCAGCAGACCAACACGCCAGAAAGGAAAATAATGATCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS GCA 72 bp | ATGATCATTATTTTCCTTTCTGGCGTGTTGGTCTGCTaGTCCACAACCTCCGTCCCATCCTTACTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: MIIIFLSGVLVC*STTSVPSLLSI Trigger: GATGGAGAGTAAGGATGGGACGGAGGTTGTGGAGCAGCAGACCAACACGCCAGAAAGGAAAATAATGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS GCA 72 bp | GCTCCATCTGCCCACATCCACGTTTTGTTTGCATTGTaGTTGCTCAGTTCAAACCAATATAAAGACGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: APSAHIHVLFAL*LLSSNQYKDGP Trigger: GGGGCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS GCA 72 bp | GGCAAGGTCCCAGGTCCAAAGAGGAAAGGATCAAACTaGTTAGACTTGCATCCAGTTCAGGATAAAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GKVPGPKRKGSN*LDLHPVQDKGN Trigger: GTTCCCTTTATCCTGAACTGGATGCAAGTCTAAGCAGTTTGATCCTTTCCTCTTTGGACCTGGGACCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS CAA 90 bp | GGCAAGGTCCCAGGTCCAAAGAGGAAAGGATCAAACTGCTTAGACTaGCATCCAGTTCAGGATAAAGGGAACACTTGTGACTCACATGTG | + |
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Preference number: 6 (lower is better) Translates to: GKVPGPKRKGSNCLD*HPVQDKGNTCDSHV Trigger: CACATGTGAGTCACAAGTGTTCCCTTTATCCTGAACTGGATGCAAGTCTAAGCAGTTTGATCCTTTCCTCTTTGGACCTGGGACCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS CAA 72 bp | CCATCTGCCCACATCCACGTTTTGTTTGCATTGTGCTaGCTCAGTTCAAACCAATATAAAGACGGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSAHIHVLFALC*LSSNQYKDGPR Trigger: TCTGGGGCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 90 bp | TGTGTGATCACAGAGGCTGGAATAATCCTGCGGGTGAATTGCAAATaGCTAAGTATATTTGGTGAGTGCAAACCGCAGGAAACTGACGAC | + |
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Preference number: 6 (lower is better) Translates to: CVITEAGIILRVNCK*LSIFGECKPQETDD Trigger: GTCGTCAGTTTCCTGCGGTTTGCACTCACCAAATATACTTAGCAATTTGCAATTCACCCGCAGGATTATTCCAGCCTCTGTGATCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS CAA 90 bp | TCTGAGACCCGTGTAAGTATTAGCTGGAATCTAAACCCCATAGGTTaGTGGGAATCCGGAGAACTCTCCATGATTTCTTCAAGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SETRVSISWNLNPIG*WESGELSMISSSHQ Trigger: CTGGTGACTTGAAGAAATCATGGAGAGTTCTCCGGATTCCCACAAACCTATGGGGTTTAGATTCCAGCTAATACTTACACGGGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412084.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS GCA 72 bp | CATCTGCCCACATCCACGTTTTGTTTGCATTGTGCTTaGTCAGTTCAAACCAATATAAAGACGGCCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HLPTSTFCLHCA*SVQTNIKTAPD Trigger: ATCTGGGGCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CCA 72 bp | CATGATTTCTTCAAGTCACCAGGGCTTCCTTCTTCGTaGTCCTCTCCACTTCTAAATACTCACGTTTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: HDFFKSPGLPSS*SSPLLNTHVLL Trigger: GAGCAAAACGTGAGTATTTAGAAGTGGAGAGGACCACGAAGAAGGAAGCCCTGGTGACTTGAAGAAATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412084.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 72 bp | GTAGCTCCATCTGCCCACATCCACGTTTTGTTTGCATaGTGCTTGCTCAGTTCAAACCAATATAAAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: VAPSAHIHVLFA*CLLSSNQYKDG Trigger: GCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 72 bp | CCAGGTCCAAAGAGGAAAGGATCAAACTGCTTAGACTaGCATCCAGTTCAGGATAAAGGGAACACTTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PGPKRKGSNCLD*HPVQDKGNTCD Trigger: GTCACAAGTGTTCCCTTTATCCTGAACTGGATGCAAGTCTAAGCAGTTTGATCCTTTCCTCTTTGGACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS CAA 90 bp | GCTTACCAATTGCTGAATGTAGCTCCATCTGCCCACATCCACGTTTaGTTTGCATTGTGCTTGCTCAGTTCAAACCAATATAAAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: AYQLLNVAPSAHIHV*FALCLLSSNQYKDG Trigger: GCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAATTGGTAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS GCA 72 bp | GTGATCACAGAGGCTGGAATAATCCTGCGGGTGAATTaGAAATTGCTAAGTATATTTGGTGAGTGCAAACCG | + |
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Preference number: 6 (lower is better) Translates to: VITEAGIILRVN*KLLSIFGECKP Trigger: CGGTTTGCACTCACCAAATATACTTAGCAATTTGCAATTCACCCGCAGGATTATTCCAGCCTCTGTGATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS GCA 72 bp | CTCGATTCTTTCACAATTGCTGAATGTAGCTCCATCTaGCCACATCCACGTTTTGTTTGCATTGTGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LDSFTIAECSSI*PHPRFVCIVLA Trigger: AGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAATTGTGAAAGAATCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS GCA 72 bp | CAGTGTGGAAGGAGTAGAGGAAGTGAAACAAGCTGTTaGTCTCCTCCTATCTTTCTCCAAATTTTACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QCGRSRGSETSC*SPPIFLQILPQ Trigger: CTGAGGTAAAATTTGGAGAAAGATAGGAGGAGAGCAACAGCTTGTTTCACTTCCTCTACTCCTTCCACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS CAA 72 bp | ACAGAGGCTGGAATAATCCTGCGGGTGAATTGCAAATaGCTAAGTATATTTGGTGAGTGCAAACCGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TEAGIILRVNCK*LSIFGECKPQE Trigger: TTCCTGCGGTTTGCACTCACCAAATATACTTAGCAATTTGCAATTCACCCGCAGGATTATTCCAGCCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 ENST00000670937.1 |
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| CDS CAA 90 bp | CTTTCACAATTGCTGAATGTAGCTCCATCTGCCCACATCCACGTTTaGTTTGCATTGTGCTTGCTCAGTTCAAACCAATATAAAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: LSQLLNVAPSAHIHV*FALCLLSSNQYKDG Trigger: GCCGTCTTTATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAATTGTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412084.1 |
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| CDS TCA 72 bp | CAAAGGCCGTATAACATGATTCCCTCCGTTTACATTTaGGACTCAGTAGCCAACCTCATCACAGCAAAGATT | + |
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Preference number: 6 (lower is better) Translates to: QRPYNMIPSVYI*DSVANLITAKI Trigger: AATCTTTGCTGTGATGAGGTTGGCTACTGAGTCTCAAATGTAAACGGAGGGAATCATGTTATACGGCCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS CCA 72 bp | CTGCTTCACATCCTTCCTAAAATGTCACCATCTTATTaGGATATAACCTTACCTGCAGTAAACCCACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLHILPKMSPSY*DITLPAVNPLP Trigger: AGGGAGTGGGTTTACTGCAGGTAAGGTTATATCCCAATAAGATGGTGACATTTTAGGAAGGATGTGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS CAA 72 bp | TTGCTGAATGTAGCTCCATCTGCCCACATCCACGTTTaGTTTGCATTGTGCTTGCTCAGTTCAAACCAATAT | + |
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Preference number: 6 (lower is better) Translates to: LLNVAPSAHIHV*FALCLLSSNQY Trigger: ATATTGGTTTGAACTGAGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 72 bp | CGTGTAAGTATTAGCTGGAATCTAAACCCCATAGGTTaGTGGGAATCCGGAGAACTCTCCATGATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RVSISWNLNPIG*WESGELSMISS Trigger: TGAAGAAATCATGGAGAGTTCTCCGGATTCCCACAAACCTATGGGGTTTAGATTCCAGCTAATACTTACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412084.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS GCA 72 bp | TTTCATAACTTGACAATTGCTGAATGTAGCTCCATCTaGCCACATCCACGTTTTGTTTGCATTGTGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: FHNLTIAECSSI*PHPRFVCIVLA Trigger: AGCAAGCACAATGCAAACAAAACGTGGATGTGGGCAGATGGAGCTACATTCAGCAATTGTCAAGTTATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663603.1 |
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| CDS CCA 72 bp | GTAAGTATTAGCTGGAATCTAAACCCCATAGGTTTGTaGGAATCCGGAGAACTCTCCATGATTTCTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: VSISWNLNPIGL*ESGELSMISSS Trigger: ACTTGAAGAAATCATGGAGAGTTCTCCGGATTCCCACAAACCTATGGGGTTTAGATTCCAGCTAATACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412084.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS CAA 90 bp | CAGTTCCAGCCTTGTGGACACATAGTCAAATTTTCTAGGCATGTCTaGTTTCTAAGGTGCCTTGGAATTCCAAATTTTCTGGGAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: QFQPCGHIVKFSRHV*FLRCLGIPNFLGNL Trigger: AAGATTTCCCAGAAAATTTGGAATTCCAAGGCACCTTAGAAACAAGACATGCCTAGAAAATTTGACTATGTGTCCACAAGGCTGGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412084.1 ENST00000655933.1 ENST00000663603.1 ENST00000667501.1 |
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| CDS TCA 72 bp | TTAGATAGATTGACTGGCTGCTTCTTTTCTGTTCCTTaGATATTCCAGACATTCACTGGCCTTAAGACACAC | + |
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Preference number: 6 (lower is better) Translates to: LDRLTGCFFSVP*IFQTFTGLKTH Trigger: GTGTGTCTTAAGGCCAGTGAATGTCTGGAATATTCAAGGAACAGAAAAGAAGCAGCCAGTCAATCTATCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS CAA 90 bp | GATCCTATTACATTTTCCCTCATAATTTGGCAGTATCTCCCTATTTaGCTTGGAGCAAAAACTAAACTCTTTACAATAGCCTGCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: DPITFSLIIWQYLPI*LGAKTKLFTIACKT Trigger: GGTCTTGCAGGCTATTGTAAAGAGTTTAGTTTTTGCTCCAAGCAAAATAGGGAGATACTGCCAAATTATGAGGGAAAATGTAATAGGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655933.1 |
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| CDS TCA 72 bp | CAAATTTCATACATTAAGTGCCTAACTCCCAGTACCTaGGAATGTAACAGATTTGGAGATAAGGTATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QISYIKCLTPST*ECNRFGDKVFV Trigger: AACAAATACCTTATCTCCAAATCTGTTACATTCTCAGGTACTGGGAGTTAGGCACTTAATGTATGAAATTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS TCA 72 bp | GCTGTTGATACTATAGCAAACATTGTAATCATTTTGTaGGGGATTGGATTCTTCCCTTTATACTGTAGCATA | + |
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Preference number: 6 (lower is better) Translates to: AVDTIANIVIIL*GIGFFPLYCSI Trigger: TATGCTACAGTATAAAGGGAAGAATCCAATCCCTCACAAAATGATTACAATGTTTGCTATAGTATCAACAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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| CDS TCA 72 bp | GAGTGGAGAATTACTAGGGTGATATTACTGATCCAGTaGAAGAATATAGGATCTATTGTAGAACATGAATAC | + |
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Preference number: 6 (lower is better) Translates to: EWRITRVILLIQ*KNIGSIVEHEY Trigger: GTATTCATGTTCTACAATAGATCCTATATTCTTTCACTGGATCAGTAATATCACCCTAGTAATTCTCCACTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670937.1 |
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| CDS GCA 72 bp | TTATATTATATACAACATGTAATATCTGGCATGGAGTaGTACAGAACCAGTATCTATTACAAAGTGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LYYIQHVISGME*YRTSIYYKVGS Trigger: ACTGCCCACTTTGTAATAGATACTGGTTCTGTAGCACTCCATGCCAGATATTACATGTTGTATATAATATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655933.1 ENST00000667501.1 |
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