Pregenerated sensors for LINC02469 (Homo sapiens)
Ensembl gene IDs: ENSG00000248408Ensembl transcript IDs: ENST00000506460.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTGGATGTATACGTGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAATCCTCACTGGGGAACCTATATAAAG | + |
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Preference number: 5 (lower is better) Translates to: SGCIRAGHRGYDGLA*AQRPDNPHWGTYIK Trigger: CTTTATATAGGTTCCCCAGTGAGGATTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCACGTATACATCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CCA 90 bp | TCTCAGGGAGTCTGCAGGGGTGGTACAGTTCCTTCAAAGGGTCTGTaGATTCTCTTGGCTTTCCTGATATGTTCCTGCAGTAGTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SQGVCRGGTVPSKGL*ILLAFLICSCSSSS Trigger: TGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGACTCCCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS GCA 90 bp | TTGAGAAAGCAAGCAGATTCACAGTTTTTGGCATCTCAGGGAGTCTaGAGGGGTGGTACAGTTCCTTCAAAGGGTCTGTGGATTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LRKQADSQFLASQGV*RGGTVPSKGLWILL Trigger: CAAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGACTCCCTGAGATGCCAAAAACTGTGAATCTGCTTGCTTTCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS GCA 90 bp | CCTTCAAAGGGTCTGTGGATTCTCTTGGCTTTCCTGATATGTTCCTaGAGTAGTTCATCATCAGAACATAACAGAAAGCCTGCGGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PSKGLWILLAFLICS*SSSSSEHNRKPAVW Trigger: CCACACCGCAGGCTTTCTGTTATGTTCTGATGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CCA 72 bp | ATACGTGCAGGTCACAGGGGATATGATGGCTTAGCTTaGGCTCAGAGGCCTGACAATCCTCACTGGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: IRAGHRGYDGLA*AQRPDNPHWGT Trigger: GGTTCCCCAGTGAGGATTGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCACGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS GCA 72 bp | CAAGCAGATTCACAGTTTTTGGCATCTCAGGGAGTCTaGAGGGGTGGTACAGTTCCTTCAAAGGGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QADSQFLASQGV*RGGTVPSKGLW Trigger: CCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGACTCCCTGAGATGCCAAAAACTGTGAATCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CCA 72 bp | GTCTGCAGGGGTGGTACAGTTCCTTCAAAGGGTCTGTaGATTCTCTTGGCTTTCCTGATATGTTCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VCRGGTVPSKGL*ILLAFLICSCS Trigger: ACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS TCA 72 bp | AAGTGGGAGTTAAGCCCAGACCATGAGCCTCCCAGTTaGGAAAGCAAGCAGATTCACAGTTTTTGGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: KWELSPDHEPPS*ESKQIHSFWHL Trigger: GAGATGCCAAAAACTGTGAATCTGCTTGCTTTCTCAACTGGGAGGCTCATGGTCTGGGCTTAACTCCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CCA 72 bp | AGTTCATCATCAGAACATAACAGAAAGCCTGCGGTGTaGGGAGATGGAGTAGCTGGGAAACGTAGGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSEHNRKPAV*GDGVAGKRRFP Trigger: TGGAAACCTACGTTTCCCAGCTACTCCATCTCCCCACACCGCAGGCTTTCTGTTATGTTCTGATGATGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CCA 72 bp | TTCACAGTTTTTGGCATCTCAGGGAGTCTGCAGGGGTaGTACAGTTCCTTCAAAGGGTCTGTGGATTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FTVFGISGSLQG*YSSFKGSVDSL Trigger: AAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGACTCCCTGAGATGCCAAAAACTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CAA 90 bp | GTCTGCAGGGGTGGTACAGTTCCTTCAAAGGGTCTGTGGATTCTCTaGGCTTTCCTGATATGTTCCTGCAGTAGTTCATCATCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: VCRGGTVPSKGLWIL*AFLICSCSSSSSEH Trigger: ATGTTCTGATGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACCCCTGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS TCA 72 bp | GCAAGGGTAGGGAGGGTGTATTGTCACAAAGTCAATTaGTCAGTTAGGGTGGGGCAGGAACAAATTACAATG | + |
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Preference number: 6 (lower is better) Translates to: ARVGRVYCHKVN*SVRVGQEQITM Trigger: CATTGTAATTTGTTCCTGCCCCACCCTAACTGATCAATTGACTTTGTGACAATACACCCTCCCTACCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CAA 72 bp | GGTGGTACAGTTCCTTCAAAGGGTCTGTGGATTCTCTaGGCTTTCCTGATATGTTCCTGCAGTAGTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: GGTVPSKGLWIL*AFLICSCSSSS Trigger: TGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGGAACTGTACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS CAA 72 bp | GAACTGGCTATTTTCACTTCTTCTGTGGATCTTCAGTaGCTTCAGGCCATCTGGATGTATACGTGCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ELAIFTSSVDLQ*LQAIWMYTCRS Trigger: TGACCTGCACGTATACATCCAGATGGCCTGAAGCAACTGAAGATCCACAGAAGAAGTGAAAATAGCCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS GCA 72 bp | GGTCTGTGGATTCTCTTGGCTTTCCTGATATGTTCCTaGAGTAGTTCATCATCAGAACATAACAGAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GLWILLAFLICS*SSSSSEHNRKP Trigger: AGGCTTTCTGTTATGTTCTGATGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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| CDS TCA 72 bp | TTCCTTCAAAGGGTCTGTGGATTCTCTTGGCTTTCCTaGTATGTTCCTGCAGTAGTTCATCATCAGAACATA | + |
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Preference number: 6 (lower is better) Translates to: FLQRVCGFSWLS*YVPAVVHHQNI Trigger: TATGTTCTGATGATGAACTACTGCAGGAACATATCAGGAAAGCCAAGAGAATCCACAGACCCTTTGAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506460.1 |
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