Pregenerated sensors for LINC02468 (Homo sapiens)
Ensembl gene IDs: ENSG00000256499Ensembl transcript IDs: ENST00000543778.1, ENST00000655042.1, ENST00000655208.1, ENST00000665410.1, ENST00000670018.1, ENST00000670447.1, ENST00000670792.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGCTCCTGCTCAAAGACCTTTGCAGAGATGACATGCTGGGTCTGTaGTCACCAGGGATCCAAATGCCTTCGATCTTGGTGCTGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GLLLKDLCRDDMLGL*SPGIQMPSILVLAH Trigger: GTGAGCCAGCACCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTCTTTGAGCAGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 |
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| CDS TCA 90 bp | TCCACACTTTCTGGGAAGCTTTGCAGAGATGACATGCTGGGTCTGTaGTCACCAGGGATCCAAATGCCTTCGATCTTGGTGCTGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: STLSGKLCRDDMLGL*SPGIQMPSILVLAH Trigger: GTGAGCCAGCACCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGAAAGTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS CCA 90 bp | GGATCCAAATGCCTTCGATCTTGGTGCTGGCTCACAATCACCAAGTaGCTTCCACCTCACAGTCTGCTGTGGTTGATTAAACTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GSKCLRSWCWLTITK*LPPHSLLWLIKLQH Trigger: ATGCTGGAGTTTAATCAACCACAGCAGACTGTGAGGTGGAAGCCACTTGGTGATTGTGAGCCAGCACCAAGATCGAAGGCATTTGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000665410.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS CCA 90 bp | GCCAATATTCCACACTTTCTGGGAAGCTTTGCAGAGATGACATGCTaGGTCTGTGATCACCAGGGATCCAAATGCCTTCGATCTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ANIPHFLGSFAEMTC*VCDHQGSKCLRSWC Trigger: GCACCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGAAAGTGTGGAATATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS GCA 90 bp | AAGGCCAATATTCCACACTTTCTGGGAAGCTTTGCAGAGATGACATaGTGGGTCTGTGATCACCAGGGATCCAAATGCCTTCGATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KANIPHFLGSFAEMT*WVCDHQGSKCLRSW Trigger: CCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGAAAGTGTGGAATATTGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS GCA 90 bp | ATCCAGCCAAAAATGTGTGTCCTTATTTTTCCTTCCTTGGGCTCCTaGTCAAAGACCTTTGCAGAGATGACATGCTGGGTCTGTGATCAC | + |
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Preference number: 5 (lower is better) Translates to: IQPKMCVLIFPSLGS*SKTFAEMTCWVCDH Trigger: GTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTCTTTGAGCAGGAGCCCAAGGAAGGAAAAATAAGGACACACATTTTTGGCTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 |
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| CDS TCA 72 bp | GCTTCATTCCCTGGTCTCCTCGGACTCCCTAGAGCCTaGAGGCAACAATGGCTAAGGCTGTTAGACAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: ASFPGLLGLPRA*RQQWLRLLDSK Trigger: TTTGCTGTCTAACAGCCTTAGCCATTGTTGCCTTCAGGCTCTAGGGAGTCCGAGGAGACCAGGGAATGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670792.1 |
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| CDS CCA 72 bp | GGCTCCTGCTCAAAGACCTTTGCAGAGATGACATGCTaGGTCTGTGATCACCAGGGATCCAAATGCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: GSCSKTFAEMTC*VCDHQGSKCLR Trigger: TCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTCTTTGAGCAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 |
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| CDS TCA 72 bp | TCTGGGAAGCTTTGCAGAGATGACATGCTGGGTCTGTaGTCACCAGGGATCCAAATGCCTTCGATCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGKLCRDDMLGL*SPGIQMPSILV Trigger: CACCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS GCA 72 bp | TTGGGCTCCTGCTCAAAGACCTTTGCAGAGATGACATaGTGGGTCTGTGATCACCAGGGATCCAAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LGSCSKTFAEMT*WVCDHQGSKCL Trigger: AAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTCTTTGAGCAGGAGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 |
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| CDS CCA 72 bp | CCACACTTTCTGGGAAGCTTTGCAGAGATGACATGCTaGGTCTGTGATCACCAGGGATCCAAATGCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: PHFLGSFAEMTC*VCDHQGSKCLR Trigger: TCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGAAAGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS TCA 72 bp | CTCAAAGACCTTTGCAGAGATGACATGCTGGGTCTGTaGTCACCAGGGATCCAAATGCCTTCGATCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LKDLCRDDMLGL*SPGIQMPSILV Trigger: CACCAAGATCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTCTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 |
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| CDS GCA 72 bp | CTATGGGGGTGGTTGTCGTCCTCGGTTTGGAGATTCTaGCCAGTAAAGAGAAACAGCATAAAGGACTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LWGWLSSSVWRF*PVKRNSIKDLH Trigger: GTGCAAGTCCTTTATGCTGTTTCTCTTTACTGGGCAGAATCTCCAAACCGAGGACGACAACCACCCCCATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS GCA 72 bp | ATTCCACACTTTCTGGGAAGCTTTGCAGAGATGACATaGTGGGTCTGTGATCACCAGGGATCCAAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IPHFLGSFAEMT*WVCDHQGSKCL Trigger: AAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGCTTCCCAGAAAGTGTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665410.1 ENST00000670447.1 |
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| CDS CAA 90 bp | TTTGCTTGCCTGAACACATCTATGGGGGTGGTTGTCGTCCTCGGTTaGGAGATTCTGCCCAGTAAAGAGAAACAGCATAAAGGACTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FACLNTSMGVVVVLG*EILPSKEKQHKGLA Trigger: TGCAAGTCCTTTATGCTGTTTCTCTTTACTGGGCAGAATCTCCAAACCGAGGACGACAACCACCCCCATAGATGTGTTCAGGCAAGCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS CAA 72 bp | CTGAACACATCTATGGGGGTGGTTGTCGTCCTCGGTTaGGAGATTCTGCCCAGTAAAGAGAAACAGCATAAA | + |
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Preference number: 6 (lower is better) Translates to: LNTSMGVVVVLG*EILPSKEKQHK Trigger: TTTATGCTGTTTCTCTTTACTGGGCAGAATCTCCAAACCGAGGACGACAACCACCCCCATAGATGTGTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS CCA 72 bp | ATAGAATCTAATGTCACCTTTGCAGAGATGACATGCTaGGTCTGTGATCACCAGGGATCCAAATGCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: IESNVTFAEMTC*VCDHQGSKCLR Trigger: TCGAAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTGACATTAGATTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670792.1 |
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| CDS GCA 72 bp | CAAATAGAATCTAATGTCACCTTTGCAGAGATGACATaGTGGGTCTGTGATCACCAGGGATCCAAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QIESNVTFAEMT*WVCDHQGSKCL Trigger: AAGGCATTTGGATCCCTGGTGATCACAGACCCAGCATGTCATCTCTGCAAAGGTGACATTAGATTCTATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670792.1 |
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| CDS CCA 72 bp | ACAATCACCAAGTGGCTTCCACCTCACAGTCTGCTGTaGTTGATTAAACTCCAGCATCTTATTGATGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: TITKWLPPHSLL*LIKLQHLIDVL Trigger: TAGAACATCAATAAGATGCTGGAGTTTAATCAACCACAGCAGACTGTGAGGTGGAAGCCACTTGGTGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000665410.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS CAA 72 bp | AGATTCTGCCCAGTAAAGAGAAACAGCATAAAGGACTaGCACGAAAAATCAGTCTGGCTGCTTCTCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RFCPVKRNSIKD*HEKSVWLLLCR Trigger: TCTACAGAGAAGCAGCCAGACTGATTTTTCGTGCAAGTCCTTTATGCTGTTTCTCTTTACTGGGCAGAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000655042.1 ENST00000655208.1 ENST00000670018.1 ENST00000670447.1 ENST00000670792.1 |
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| CDS CAA 72 bp | GCAGTTATTCTCATTGTTTCTGAGAGAACAGTCTTATaGCTCATGCCTTGTGTATTCCCATTTCACTCATTC | + |
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Preference number: 6 (lower is better) Translates to: AVILIVSERTVL*LMPCVFPFHSF Trigger: GAATGAGTGAAATGGGAATACACAAGGCATGAGCAATAAGACTGTTCTCTCAGAAACAATGAGAATAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000543778.1 ENST00000655042.1 ENST00000655208.1 ENST00000665410.1 ENST00000670447.1 |
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