Pregenerated sensors for LINC02465 (Homo sapiens)
Ensembl gene IDs: ENSG00000249618Ensembl transcript IDs: ENST00000507099.1, ENST00000508724.1, ENST00000513875.5, ENST00000514892.1, ENST00000652794.1, ENST00000653703.1, ENST00000654252.1, ENST00000654449.1, ENST00000655596.1, ENST00000657114.1, ENST00000657591.1, ENST00000657768.1, ENST00000657908.1, ENST00000658130.1, ENST00000659073.1, ENST00000660303.1, ENST00000660340.1, ENST00000661425.1, ENST00000663075.1, ENST00000663608.1, ENST00000663850.1, ENST00000663986.1, ENST00000664364.1, ENST00000664657.1, ENST00000666766.1, ENST00000668510.1, ENST00000669757.1, ENST00000671223.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTCACCTTCCACCATGAGGGGAAGCAGCCTGAGGCTCTCACCAGCTaGAGATGGCCAATCTTGAACTTTTCCAGACTTCCAAACTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: FTFHHEGKQPEALTS*RWPILNFSRLPNLL Trigger: AAGCAAGTTTGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCTGCTTCCCCTCATGGTGGAAGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000660303.1 ENST00000663075.1 ENST00000669757.1 |
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| CDS TCA 90 bp | GAGCAAGAACTCCTCCACATGACAGAAGATAGATGGAACACTAGCTaGTCTCAACTGCTAGACCAGTGTACACGCCTTTCAGGTAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: EQELLHMTEDRWNTS*SQLLDQCTRLSGSL Trigger: AAGACTACCTGAAAGGCGTGTACACTGGTCTAGCAGTTGAGATCAGCTAGTGTTCCATCTATCTTCTGTCATGTGGAGGAGTTCTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513875.5 |
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| CDS TCA 90 bp | CAGAGAGTCTTCCCTGACATGACAGAAGATAGATGGAACACTAGCTaGTCTCAACTGCTAGACCAGTGTACACGCCTTTCAGGTAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QRVFPDMTEDRWNTS*SQLLDQCTRLSGSL Trigger: AAGACTACCTGAAAGGCGTGTACACTGGTCTAGCAGTTGAGATCAGCTAGTGTTCCATCTATCTTCTGTCATGTCAGGGAAGACTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000508724.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS CCA 90 bp | TCTTGGCTCCTTGTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTaGGTAGAGCCATTGGTTCTCTTAGAATGTAGAGCTGGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: SWLLVSLSSVVRRIC*VEPLVLLECRAGHG Trigger: GCCATGGCCAGCTCTACATTCTAAGAGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACACAAGGAGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000657114.1 ENST00000657768.1 ENST00000660303.1 ENST00000660340.1 ENST00000663075.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 ENST00000671223.1 |
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| CDS CCA 90 bp | TCTTGGCTCCTTGTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTaGGTAGAGCCATTGGTTCATGTAATCTCTGCACACACCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SWLLVSLSSVVRRIC*VEPLVHVISAHTSS Trigger: GGAGCTGGTGTGTGCAGAGATTACATGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACACAAGGAGCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664364.1 ENST00000668510.1 |
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| CDS TCA 90 bp | AAGCTTGGTTTACTGTGCCTTTCGAGCATTGTTGGTGGGACCACTTaGATAACTACAAGGGCAGCCACTCATAGAACACATACTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KLGLLCLSSIVGGTT*ITTRAATHRTHTFL Trigger: CAAGAAAGTATGTGTTCTATGAGTGGCTGCCCTTGTAGTTATTCAAGTGGTCCCACCAACAATGCTCGAAAGGCACAGTAAACCAAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669757.1 |
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| CDS GCA 90 bp | GCTGTCCACAGAGGATCCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAGATAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: AVHRGSFCLMTLAGP*SRVGGIFILMQITC Trigger: GCAAGTTATCTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGGATCCTCTGTGGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000658130.1 ENST00000659073.1 ENST00000660340.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000668510.1 ENST00000669757.1 |
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| CDS GCA 90 bp | GCAGTCTCCTATGGAACTATGCATGGAACATCCTTGGCATCAGAGTaGTCAATTATATATCTTTTGTCTCATGACTCTTGCAGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: AVSYGTMHGTSLASE*SIIYLLSHDSCRAL Trigger: CAAGGCCCTGCAAGAGTCATGAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS CCA 90 bp | GGATCCAAGACAGCTTTATTCCCATGTTTGGGATCTTGGCAGAGCTaGATTCTACTGGGCTCACTATTTTATTTTGTAATCTCAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GSKTALFPCLGSWQS*ILLGSLFYFVISGP Trigger: AGGCCCTGAGATTACAAAATAAAATAGTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS CCA 90 bp | AATCTTCAGCTGGGAGTTGGTTCCTGCATTGAAGTAATCTTTTGTTaGAGAGAGAATTCAGCGGTGTCTTGTCCATATCAGGATCTGACC | + |
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Preference number: 5 (lower is better) Translates to: NLQLGVGSCIEVIFC*RENSAVSCPYQDLT Trigger: GGTCAGATCCTGATATGGACAAGACACCGCTGAATTCTCTCTCCAACAAAAGATTACTTCAATGCAGGAACCAACTCCCAGCTGAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660340.1 |
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| CDS TCA 90 bp | TTTGTTGGAGAGAGAATTCAGCGGTGTCTTGTCCATATCAGGATCTaGCCCTTGAAGCTTCTATTGGTATATGTCTGGTATGTAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: FVGERIQRCLVHIRI*PLKLLLVYVWYVIS Trigger: GGAGATTACATACCAGACATATACCAATAGAAGCTTCAAGGGTCAGATCCTGATATGGACAAGACACCGCTGAATTCTCTCTCCAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660340.1 |
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| CDS GCA 90 bp | CTGGGTTTTAGGAGTGTCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAGATAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: LGFRSVFCLMTLAGP*SRVGGIFILMQITC Trigger: GCAAGTTATCTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGACACTCCTAAAACCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS CCA 90 bp | GTGAATAAATACAAATGTGGTGTTGCCAGGGCAATTGTCACCACCTaGTTTGCAGTCTCTGTCTTCTTCAGCCACATGAAAAATCCTATT | + |
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Preference number: 5 (lower is better) Translates to: VNKYKCGVARAIVTT*FAVSVFFSHMKNPI Trigger: AATAGGATTTTTCATGTGGCTGAAGAAGACAGAGACTGCAAACCAGGTGGTGACAATTGCCCTGGCAACACCACATTTGTATTTATTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655596.1 ENST00000664657.1 |
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| CDS CCA 90 bp | TTAAGTCATCACATCTCAACAGTGGGGATCACCTACTGTTATCTATaGTTGCTGAACCATAAGCCTCCACCGCTTTTAATTAACTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSHHISTVGITYCYL*LLNHKPPPLLINLQ Trigger: CTGCAAGTTAATTAAAAGCGGTGGAGGCTTATGGTTCAGCAACCATAGATAACAGTAGGTGATCCCCACTGTTGAGATGTGATGACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS GCA 90 bp | GAGAAGGAAAGAAAACAAGTGACCTTGTTTAATCTCCTTGTCACCTaGACCTTCCAGTCTTTGCAATCTGAAAAACACATTCCACTAGTC | + |
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Preference number: 5 (lower is better) Translates to: EKERKQVTLFNLLVT*TFQSLQSEKHIPLV Trigger: GACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGTGCAGGTGACAAGGAGATTAAACAAGGTCACTTGTTTTCTTTCCTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000508724.1 ENST00000514892.1 |
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| CDS GCA 90 bp | CATTGCTATAGGCAATCAATGGAGATAGACTCAGGCAAGAATAGATaGTTTGAGCTGAAGACAGGTTGTCTCAGTAAGAGAGGAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: HCYRQSMEIDSGKNR*FELKTGCLSKRGNS Trigger: AGAATTTCCTCTCTTACTGAGACAACCTGTCTTCAGCTCAAAGCATCTATTCTTGCCTGAGTCTATCTCCATTGATTGCCTATAGCAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663075.1 ENST00000664657.1 |
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| CDS CCA 90 bp | GGTCATAACAGACAAAAAGTGGATGCTATTAGCCTCTTAATGCTGTaGCCCAGAAACTGGCATGGAATTATTGCAGCTATATTCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: GHNRQKVDAISLLML*PRNWHGIIAAIFIR Trigger: CCTTATGAATATAGCTGCAATAATTCCATGCCAGTTTCTGGGCCACAGCATTAAGAGGCTAATAGCATCCACTTTTTGTCTGTTATGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS CCA 90 bp | GTTCCAACTGTGCAGTCTCCTATGGAACTATGCATGGAACATCCTTaGCATCAGAGTGCTCAATTATATATCTTTTGTCTCATGACTCTT | + |
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Preference number: 5 (lower is better) Translates to: VPTVQSPMELCMEHP*HQSAQLYIFCLMTL Trigger: AAGAGTCATGAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCACAGTTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS GCA 90 bp | GAAACAAATGCATTTGCCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAGATAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: ETNAFAFCLMTLAGP*SRVGGIFILMQITC Trigger: GCAAGTTATCTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGGCAAATGCATTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661425.1 |
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| CDS TCA 90 bp | AGTCGATCAAGACATCTTAGAAGAGATCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTTGACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: SRSRHLRRDLPVFAI*KTHSTSHEHPLDCT Trigger: TGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGATCTCTTCTAAGATGTCTTGATCGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653703.1 ENST00000655596.1 ENST00000660340.1 |
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| CDS TCA 90 bp | GTATGCTTTATACATGAAATGCTCAATTTAAAACAGCAGCCAGCCTaGCATTGCTATAGGCAATCAATGGAGATAGACTCAGGCAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: VCFIHEMLNLKQQPA*HCYRQSMEIDSGKN Trigger: ATTCTTGCCTGAGTCTATCTCCATTGATTGCCTATAGCAATGTCAGGCTGGCTGCTGTTTTAAATTGAGCATTTCATGTATAAAGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663075.1 ENST00000664657.1 |
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| CDS TCA 90 bp | CGTGGATCTGCTTTGAAGGATTCTGCCTTATGTTATGCTACTAGATaGCGTAGGTATTATGAAGAGAAAACCTATTGGTATATGTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RGSALKDSALCYATR*RRYYEEKTYWYMSG Trigger: ACCAGACATATACCAATAGGTTTTCTCTTCATAATACCTACGTCATCTAGTAGCATAACATAAGGCAGAATCCTTCAAAGCAGATCCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663850.1 |
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| CDS TCA 90 bp | TTTTGGATCCACAATAACCAGTATAGCCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTTGACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: FWIHNNQYSLPVFAI*KTHSTSHEHPLDCT Trigger: TGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGCTATACTGGTTATTGTGGATCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671223.1 |
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| CDS GCA 90 bp | ATCATAGCTAATATTGTAATCAATCTTCAGCTGGGAGTTGGTTCCTaGATTGAAGTAATCTTTTGTTGGAGAGAGAATTCAGCGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: IIANIVINLQLGVGS*IEVIFCWRENSAVS Trigger: AGACACCGCTGAATTCTCTCTCCAACAAAAGATTACTTCAATGCAGGAACCAACTCCCAGCTGAAGATTGATTACAATATTAGCTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660340.1 |
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| CDS TCA 90 bp | AGGAGTCAACCTTTGAAGGATTCTGCCTTATGTTATGCTACTAGATaGCGTAGGTATTATGAAGAGAAAACCTATTGGTATATGTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RSQPLKDSALCYATR*RRYYEEKTYWYMSG Trigger: ACCAGACATATACCAATAGGTTTTCTCTTCATAATACCTACGTCATCTAGTAGCATAACATAAGGCAGAATCCTTCAAAGGTTGACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654252.1 ENST00000657591.1 ENST00000658130.1 ENST00000659073.1 ENST00000666766.1 |
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| CDS GCA 90 bp | AGTGCTCAATTATATATCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAGATAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: SAQLYIFCLMTLAGP*SRVGGIFILMQITC Trigger: GCAAGTTATCTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGATATATAATTGAGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653703.1 ENST00000657591.1 ENST00000657908.1 |
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| CDS GCA 90 bp | TTTATAACAGATGCTATATACGCTGTAGTCAGGCATTTGGTTAATTaGTTCTCTGATGGAGAGACCATCTTCAGTTGCAAAGGATTTAAA | + |
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Preference number: 5 (lower is better) Translates to: FITDAIYAVVRHLVN*FSDGETIFSCKGFK Trigger: TTTAAATCCTTTGCAACTGAAGATGGTCTCTCCATCAGAGAAGCAATTAACCAAATGCCTGACTACAGCGTATATAGCATCTGTTATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS GCA 90 bp | TTAATGACTACTTATTCATTGAAGGATGACCCATTGCCAGAATTTTaGTCTCTGAGGTGTCAATGTGAGTTGTTGATGACTATTGGTATA | + |
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Preference number: 5 (lower is better) Translates to: LMTTYSLKDDPLPEF*SLRCQCELLMTIGI Trigger: TATACCAATAGTCATCAACAACTCACATTGACACCTCAGAGAGCAAAATTCTGGCAATGGGTCATCCTTCAATGAATAAGTAGTCATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663986.1 |
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| CDS TCA 90 bp | ATTCATAATAGACATGTCATTTCTAACCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTTGACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: IHNRHVISNLPVFAI*KTHSTSHEHPLDCT Trigger: TGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGTTAGAAATGACATGTCTATTATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS GCA 72 bp | CACCATGAGGGGAAGCAGCCTGAGGCTCTCACCAGCTaGAGATGGCCAATCTTGAACTTTTCCAGACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HHEGKQPEALTS*RWPILNFSRLP Trigger: TGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCTGCTTCCCCTCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000513875.5 ENST00000652794.1 ENST00000653703.1 ENST00000654252.1 ENST00000655596.1 ENST00000657591.1 ENST00000657768.1 ENST00000658130.1 ENST00000660303.1 ENST00000660340.1 ENST00000661425.1 ENST00000663075.1 ENST00000663608.1 ENST00000663986.1 ENST00000664364.1 ENST00000664657.1 ENST00000668510.1 ENST00000669757.1 ENST00000671223.1 |
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| CDS GCA 72 bp | AGGCAGGGAGGGAGGTTGTCTTCACTTGTCACTTGCTaGTCCAGAGTACAGCTCCACAGCATGAGTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: RQGGRLSSLVTC*SRVQLHSMSTE Trigger: TTCTGTACTCATGCTGTGGAGCTGTACTCTGGAGCAGCAAGTGACAAGTGAAGACAACCTCCCTCCCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657591.1 ENST00000658130.1 |
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| CDS CCA 72 bp | GTGGTGGAGCCCAGGTTCCAACTGTGCAGTCTCCTATaGAACTATGCATGGAACATCCTTGGCATCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVEPRFQLCSLL*NYAWNILGIRV Trigger: CACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCACAGTTGGAACCTGGGCTCCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS CCA 72 bp | GAGGGGAAGCAGCCTGAGGCTCTCACCAGCTGCAGATaGCCAATCTTGAACTTTTCCAGACTTCCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: EGKQPEALTSCR*PILNFSRLPNL Trigger: CAAGTTTGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCTGCTTCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000660303.1 ENST00000663075.1 ENST00000669757.1 |
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| CDS CCA 72 bp | GGTCTGCTGGATCCAAGACAGCTTTATTCCCATGTTTaGGATCTTGGCAGAGCTGGATTCTACTGGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GLLDPRQLYSHV*DLGRAGFYWAH Trigger: GTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCCAGCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS CAA 72 bp | GAACCAAGAGTAACCAGCAGCACCTTTGCTTGCTTTTaGACCTGGTACCCTCTGGCTTTGGGGTCAGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: EPRVTSSTFACF*TWYPLALGSVD Trigger: ATCGACTGACCCCAAAGCCAGAGGGTACCAGGTCAAAAAGCAAGCAAAGGTGCTGCTGGTTACTCTTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659073.1 ENST00000663850.1 |
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| CDS GCA 72 bp | ATCCAAGATGCTGTGTTAGCTAGACTCCAAAGATGGTaGTCCAGTGAGCCATGGTTCCTGATAGTCACACCC | + |
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Preference number: 6 (lower is better) Translates to: IQDAVLARLQRW*SSEPWFLIVTP Trigger: GGGTGTGACTATCAGGAACCATGGCTCACTGGAGCACCATCTTTGGAGTCTAGCTAACACAGCATCTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000652794.1 ENST00000654252.1 ENST00000657591.1 ENST00000658130.1 ENST00000659073.1 ENST00000660303.1 ENST00000664364.1 ENST00000668510.1 |
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| CDS CCA 72 bp | TTAGCTAGACTCCAAAGATGGTGCTCCAGTGAGCCATaGTTCCTGATAGTCACACCCTATGCAGTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LARLQRWCSSEP*FLIVTPYAVSS Trigger: AGAGGAGACTGCATAGGGTGTGACTATCAGGAACCATGGCTCACTGGAGCACCATCTTTGGAGTCTAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000652794.1 ENST00000654252.1 ENST00000658130.1 ENST00000659073.1 ENST00000664364.1 |
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| CDS CCA 72 bp | ATAGCCCTGGCCATAGACTGTCAGTTGTTTCCATCTTaGGTGCTGTCCACAGAGGATCTTTTGTTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IALAIDCQLFPS*VLSTEDLLLSR Trigger: CCTGGACAACAAAAGATCCTCTGTGGACAGCACCCAAGATGGAAACAACTGACAGTCTATGGCCAGGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS CCA 72 bp | ATAGCCCTGGCCATAGACTGTCAGTTGTTTCCATCTTaGGTGCTGTCCACAGAGGATCCTCACACAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: IALAIDCQLFPS*VLSTEDPHTDS Trigger: AGAATCTGTGTGAGGATCCTCTGTGGACAGCACCCAAGATGGAAACAACTGACAGTCTATGGCCAGGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663075.1 |
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| CDS CAA 72 bp | TGGTCTGCTGGATCCAAGACAGCTTTATTCCCATGTTaGGGATCTTGGCAGAGCTGGATTCTACTGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: WSAGSKTALFPC*GSWQSWILLGS Trigger: TGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCCAGCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS CAA 90 bp | TCACCAGAGTATAGCCCTGGCCATAGACTGTCAGTTGTTTCCATCTaGGGTGCTGTCCACAGAGGATCCTTTTGTCTCATGACTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SPEYSPGHRLSVVSI*GAVHRGSFCLMTLA Trigger: TGCAAGAGTCATGAGACAAAAGGATCCTCTGTGGACAGCACCCAAGATGGAAACAACTGACAGTCTATGGCCAGGGCTATACTCTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000658130.1 ENST00000659073.1 ENST00000660340.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000668510.1 ENST00000669757.1 |
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| CDS TCA 72 bp | AGCCTGAGGCTCTCACCAGCTGCAGATGGCCAATCTTaGACTTTTCCAGACTTCCAAACTTGCTTTTTGACC | + |
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Preference number: 6 (lower is better) Translates to: SLRLSPAADGQS*TFPDFQTCFLT Trigger: GGTCAAAAAGCAAGTTTGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000660303.1 ENST00000663075.1 ENST00000669757.1 |
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| CDS CAA 72 bp | GGGGTGACTTCTAGCTCCCCCATGGAGAAAGTTGATTaGGTAGAGCAAAGACTGCCCAGGAACAATATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GVTSSSPMEKVD*VEQRLPRNNIW Trigger: CCAAATATTGTTCCTGGGCAGTCTTTGCTCTACCAAATCAACTTTCTCCATGGGGGAGCTAGAAGTCACCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 19 transcripts: ENST00000513875.5 ENST00000652794.1 ENST00000653703.1 ENST00000654252.1 ENST00000655596.1 ENST00000657114.1 ENST00000657591.1 ENST00000657768.1 ENST00000658130.1 ENST00000659073.1 ENST00000660303.1 ENST00000660340.1 ENST00000661425.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 ENST00000671223.1 |
||
| CDS CAA 72 bp | CAGCCTGAGGCTCTCACCAGCTGCAGATGGCCAATCTaGAACTTTTCCAGACTTCCAAACTTGCTTTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QPEALTSCRWPI*NFSRLPNLLFD Trigger: GTCAAAAAGCAAGTTTGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000660303.1 ENST00000663075.1 ENST00000669757.1 |
||
| CDS CAA 90 bp | GTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTGGGTAGAGCCATaGGTTCTCTTAGAATGTAGAGCTGGCCATGGCGGAGAATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSLSSVVRRICWVEP*VLLECRAGHGGECG Trigger: CCCACATTCTCCGCCATGGCCAGCTCTACATTCTAAGAGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000657114.1 ENST00000657768.1 ENST00000660303.1 ENST00000660340.1 ENST00000663075.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 ENST00000671223.1 |
||
| CDS CAA 90 bp | GTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTGGGTAGAGCCATaGGTTCATGTAATCTCTGCACACACCAGCTCCCCTTCACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLSSVVRRICWVEP*VHVISAHTSSPSPS Trigger: GGAAGGTGAAGGGGAGCTGGTGTGTGCAGAGATTACATGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664364.1 ENST00000668510.1 |
||
| CDS CAA 90 bp | GTCTTGGCTCCTTGTGTCTTTGTCATCTGTGGTGAGAAGAATATGTaGGGTAGAGCCATTGGTTCATGTAATCTCTGCACACACCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLAPCVFVICGEKNM*GRAIGSCNLCTHQL Trigger: GAGCTGGTGTGTGCAGAGATTACATGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACACAAGGAGCCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664364.1 ENST00000668510.1 |
||
| CDS CCA 72 bp | TACAAATGTGGTGTTGCCAGGGCAATTGTCACCACCTaGTTTGCAGTCTCTGTCTTCTTCAGCCACATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: YKCGVARAIVTT*FAVSVFFSHMK Trigger: TTTCATGTGGCTGAAGAAGACAGAGACTGCAAACCAGGTGGTGACAATTGCCCTGGCAACACCACATTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655596.1 ENST00000664657.1 |
||
| CDS CCA 72 bp | CTACAAGGGCAGCCACTCATAGAACACATACTTTCTTaGCTGGATTTCCCATGTAATCTCTGCACACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQGQPLIEHILS*LDFPCNLCTHQ Trigger: CTGGTGTGTGCAGAGATTACATGGGAAATCCAGCCAAGAAAGTATGTGTTCTATGAGTGGCTGCCCTTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669757.1 |
||
| CDS CCA 72 bp | AAAGCTTGGTTTACTGTGCCTTTCGAGCATTGTTGGTaGGACCACTTGAATAACTACAAGGGCAGCCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: KAWFTVPFEHCW*DHLNNYKGSHS Trigger: TGAGTGGCTGCCCTTGTAGTTATTCAAGTGGTCCCACCAACAATGCTCGAAAGGCACAGTAAACCAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669757.1 |
||
| CDS CAA 72 bp | TCATCTGTGGTGAGAAGAATATGTTGGGTAGAGCCATaGGTTCTCTTAGAATGTAGAGCTGGCCATGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSVVRRICWVEP*VLLECRAGHGG Trigger: TCCGCCATGGCCAGCTCTACATTCTAAGAGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000657114.1 ENST00000657768.1 ENST00000660303.1 ENST00000660340.1 ENST00000663075.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 ENST00000671223.1 |
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| CDS TCA 72 bp | AGCCTGAGGCTCTCACCAGCTGCAGATGGCCAATCTTaGACTTTTCCAGACTTCCAAACTAAAATAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLRLSPAADGQS*TFPDFQTKIDV Trigger: GACATCTATTTTAGTTTGGAAGTCTGGAAAAGTTCAAGATTGGCCATCTGCAGCTGGTGAGAGCCTCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000513875.5 ENST00000652794.1 ENST00000653703.1 ENST00000654252.1 ENST00000655596.1 ENST00000657591.1 ENST00000657768.1 ENST00000658130.1 ENST00000660340.1 ENST00000661425.1 ENST00000663608.1 ENST00000663986.1 ENST00000664364.1 ENST00000664657.1 ENST00000668510.1 ENST00000671223.1 |
||
| CDS TCA 72 bp | TTCCCTGACATGACAGAAGATAGATGGAACACTAGCTaGTCTCAACTGCTAGACCAGTGTACACGCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FPDMTEDRWNTS*SQLLDQCTRLS Trigger: TGAAAGGCGTGTACACTGGTCTAGCAGTTGAGATCAGCTAGTGTTCCATCTATCTTCTGTCATGTCAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000508724.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
||
| CDS TCA 72 bp | TTACTGTGCCTTTCGAGCATTGTTGGTGGGACCACTTaGATAACTACAAGGGCAGCCACTCATAGAACACAT | + |
|
Preference number: 6 (lower is better) Translates to: LLCLSSIVGGTT*ITTRAATHRTH Trigger: ATGTGTTCTATGAGTGGCTGCCCTTGTAGTTATTCAAGTGGTCCCACCAACAATGCTCGAAAGGCACAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669757.1 |
||
| CDS GCA 72 bp | CTTAATGCTGTGGCCCAGAAACTGGCATGGAATTATTaGAGCTATATTCATAAGGCACTCACAGAGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LNAVAQKLAWNY*SYIHKALTELT Trigger: GGTGAGCTCTGTGAGTGCCTTATGAATATAGCTGCAATAATTCCATGCCAGTTTCTGGGCCACAGCATTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654449.1 |
||
| CDS CCA 72 bp | AGAGGATCCTCACACAGATTCTGCAGGTCAGGAATTTaGAAGAAGCTTAGCTACTTGTCTCTAGTGGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGSSHRFCRSGI*KKLSYLSLVVG Trigger: ACCTACCACTAGAGACAAGTAGCTAAGCTTCTTCCAAATTCCTGACCTGCAGAATCTGTGTGAGGATCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663075.1 |
||
| CDS CAA 72 bp | CAACCATCTTGCTTTTTGACCTGGTACCCTCTGGCTTaGGGGTCAGTCGATCAAGACATCTTAGAAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QPSCFLTWYPLA*GSVDQDILEEI Trigger: TATCTCTTCTAAGATGTCTTGATCGACTGACCCCAAAGCCAGAGGGTACCAGGTCAAAAAGCAAGATGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652794.1 |
||
| CDS CAA 72 bp | ACCTTTGCTTGCTTTTTGACCTGGTACCCTCTGGCTTaGGGGTCAGTCGATCAAGACATCTTAGAAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: TFACFLTWYPLA*GSVDQDILEEI Trigger: TATCTCTTCTAAGATGTCTTGATCGACTGACCCCAAAGCCAGAGGGTACCAGGTCAAAAAGCAAGCAAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659073.1 |
||
| CDS CCA 72 bp | GGATCCAAGACAGCTTTATTCCCATGTTTGGGATCTTaGCAGAGCTGGATTCTACTGGGCTCACTATTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GSKTALFPCLGS*QSWILLGSLFY Trigger: ATAAAATAGTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654449.1 |
||
| CDS CCA 72 bp | CTGGGAGTTGGTTCCTGCATTGAAGTAATCTTTTGTTaGAGAGAGAATTCAGCGGTGTCTTGTCCATATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGVGSCIEVIFC*RENSAVSCPYQ Trigger: CTGATATGGACAAGACACCGCTGAATTCTCTCTCCAACAAAAGATTACTTCAATGCAGGAACCAACTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660340.1 |
||
| CDS CCA 72 bp | CACATCTCAACAGTGGGGATCACCTACTGTTATCTATaGTTGCTGAACCATAAGCCTCCACCGCTTTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: HISTVGITYCYL*LLNHKPPPLLI Trigger: AATTAAAAGCGGTGGAGGCTTATGGTTCAGCAACCATAGATAACAGTAGGTGATCCCCACTGTTGAGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS CAA 72 bp | TGGATCCAAGACAGCTTTATTCCCATGTTTGGGATCTaGGCAGAGCTGGATTCTACTGGGCTCACTATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WIQDSFIPMFGI*AELDSTGLTIL Trigger: TAAAATAGTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654449.1 |
||
| CDS CAA 72 bp | TTCCAAACTTGCTTTTTGACCTGGTACCCTCTGGCTTaGGGGTCAGTCGATCAAGACATCTTAGAAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: FQTCFLTWYPLA*GSVDQDILEEI Trigger: TATCTCTTCTAAGATGTCTTGATCGACTGACCCCAAAGCCAGAGGGTACCAGGTCAAAAAGCAAGTTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000660303.1 ENST00000663075.1 ENST00000669757.1 |
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| CDS CAA 90 bp | GTGGTCTGCTGGATCCAAGACAGCTTTATTCCCATGTTTGGGATCTaGGCAGAGCTGGATTCTACTGGGCTCACTATTTTATTTTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VVCWIQDSFIPMFGI*AELDSTGLTILFCN Trigger: ATTACAAAATAAAATAGTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGTCTTGGATCCAGCAGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS CAA 90 bp | AGTCATCACATCTCAACAGTGGGGATCACCTACTGTTATCTATGGTaGCTGAACCATAAGCCTCCACCGCTTTTAATTAACTTGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SHHISTVGITYCYLW*LNHKPPPLLINLQT Trigger: AGTCTGCAAGTTAATTAAAAGCGGTGGAGGCTTATGGTTCAGCAACCATAGATAACAGTAGGTGATCCCCACTGTTGAGATGTGATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS TCA 72 bp | AAGAGATACATGACAGAAGATAGATGGAACACTAGCTaGTCTCAACTGCTAGACCAGTGTACACGCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KRYMTEDRWNTS*SQLLDQCTRLS Trigger: TGAAAGGCGTGTACACTGGTCTAGCAGTTGAGATCAGCTAGTGTTCCATCTATCTTCTGTCATGTATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000652794.1 ENST00000654252.1 ENST00000657591.1 ENST00000657768.1 ENST00000658130.1 ENST00000659073.1 ENST00000660303.1 ENST00000661425.1 ENST00000663075.1 ENST00000663608.1 ENST00000663986.1 ENST00000664364.1 ENST00000664657.1 ENST00000666766.1 ENST00000668510.1 ENST00000669757.1 |
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| CDS TCA 72 bp | TGGCGAACTCTAACATTCAGATCATCTATTGCTAGATaGACCAAGAGTAACCAGCAGCACCTTTGCTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WRTLTFRSSIAR*TKSNQQHLCLL Trigger: AAGCAAGCAAAGGTGCTGCTGGTTACTCTTGGTTCATCTAGCAATAGATGATCTGAATGTTAGAGTTCGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659073.1 ENST00000663850.1 |
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| CDS TCA 72 bp | AGAAAAGACATGACAGAAGATAGATGGAACACTAGCTaGTCTCAACTGCTAGACCAGTGTACACGCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RKDMTEDRWNTS*SQLLDQCTRLS Trigger: TGAAAGGCGTGTACACTGGTCTAGCAGTTGAGATCAGCTAGTGTTCCATCTATCTTCTGTCATGTCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657114.1 |
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| CDS TCA 72 bp | GAGAGAATTCAGCGGTGTCTTGTCCATATCAGGATCTaGCCCTTGAAGCTTCTATTGGTATATGTCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ERIQRCLVHIRI*PLKLLLVYVWY Trigger: ATACCAGACATATACCAATAGAAGCTTCAAGGGTCAGATCCTGATATGGACAAGACACCGCTGAATTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660340.1 |
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| CDS GCA 72 bp | AGAGGATCCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGSFCLMTLAGP*SRVGGIFILMQ Trigger: CTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGGATCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000658130.1 ENST00000659073.1 ENST00000660340.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000668510.1 ENST00000669757.1 |
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| CDS GCA 72 bp | AGGCAATCAATGGAGATAGACTCAGGCAAGAATAGATaGTTTGAGCTGAAGACAGGTTGTCTCAGTAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RQSMEIDSGKNR*FELKTGCLSKR Trigger: TCTCTTACTGAGACAACCTGTCTTCAGCTCAAAGCATCTATTCTTGCCTGAGTCTATCTCCATTGATTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663075.1 ENST00000664657.1 |
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| CDS GCA 72 bp | GCATTTGCCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AFAFCLMTLAGP*SRVGGIFILMQ Trigger: CTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGGCAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661425.1 |
||
| CDS GCA 72 bp | AGGAGTGTCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSVFCLMTLAGP*SRVGGIFILMQ Trigger: CTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGACACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS CCA 72 bp | AGGTTCCAACTGTGCAGTCTCCTATGGAACTATGCATaGAACATCCTTGGCATCAGAGTGCTCAATTATATA | + |
|
Preference number: 6 (lower is better) Translates to: RFQLCSLLWNYA*NILGIRVLNYI Trigger: TATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCACAGTTGGAACCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS CCA 72 bp | CTTGTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTaGGTAGAGCCATTGGTTCATGTAATCTCTGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LVSLSSVVRRIC*VEPLVHVISAH Trigger: GTGTGCAGAGATTACATGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664364.1 ENST00000668510.1 |
||
| CDS CAA 90 bp | GGTTCCAACTGTGCAGTCTCCTATGGAACTATGCATGGAACATCCTaGGCATCAGAGTGCTCAATTATATATCTTTTGTCTCATGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSNCAVSYGTMHGTS*ASECSIIYLLSHDS Trigger: AGAGTCATGAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCACAGTTGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS TCA 72 bp | TGGCGAACTCTAACATTCAGATCATCTATTGCTAGATaGACCAAGAGTAACCAGCAGCACCTTTGCTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WRTLTFRSSIAR*TKSNQQHLCFH Trigger: ATGAAAGCAAAGGTGCTGCTGGTTACTCTTGGTTCATCTAGCAATAGATGATCTGAATGTTAGAGTTCGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000655596.1 ENST00000657114.1 ENST00000658130.1 ENST00000660340.1 ENST00000661425.1 ENST00000663075.1 ENST00000663608.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 |
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| CDS GCA 72 bp | GATGCTATATACGCTGTAGTCAGGCATTTGGTTAATTaGTTCTCTGATGGAGAGACCATCTTCAGTTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DAIYAVVRHLVN*FSDGETIFSCK Trigger: TTTGCAACTGAAGATGGTCTCTCCATCAGAGAAGCAATTAACCAAATGCCTGACTACAGCGTATATAGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS CCA 72 bp | CTTGTGTCTTTGTCATCTGTGGTGAGAAGAATATGTTaGGTAGAGCCATTGGTTCTCTTAGAATGTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVSLSSVVRRIC*VEPLVLLECRA Trigger: AGCTCTACATTCTAAGAGAACCAATGGCTCTACCCAACATATTCTTCTCACCACAGATGACAAAGACACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000507099.1 ENST00000513875.5 ENST00000652794.1 ENST00000654252.1 ENST00000657114.1 ENST00000657768.1 ENST00000660303.1 ENST00000660340.1 ENST00000663075.1 ENST00000663608.1 ENST00000663850.1 ENST00000663986.1 ENST00000666766.1 ENST00000669757.1 ENST00000671223.1 |
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| CDS CCA 72 bp | GTGCAGTCTCCTATGGAACTATGCATGGAACATCCTTaGCATCAGAGTGCTCAATTATATATCTTTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQSPMELCMEHP*HQSAQLYIFCL Trigger: GAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
||
| CDS CAA 72 bp | CACAGTCGACTTCCATTTATATCCCATGGGTCGAAATaGTGTGATACGGCCACTTCTTCTTTATTTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HSRLPFISHGSK*CDTATSSLFQR Trigger: TCTCTGAAATAAAGAAGAAGTGGCCGTATCACACAATTTCGACCCATGGGATATAAATGGAAGTCGACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514892.1 |
||
| CDS CAA 90 bp | TCTTTGCAATCTGAAAAACACATTCCACTAGTCATGAACATCCTCTaGACTGTACATATGCTCCACCTTAACCTTGTATCTCCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLQSEKHIPLVMNIL*TVHMLHLNLVSPPG Trigger: ACCTGGAGGAGATACAAGGTTAAGGTGGAGCATATGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS CAA 90 bp | TTGGGGTCAGTCGATCAAGACATCTTAGAAGAGATCTTCCAGTCTTaGCAATCTGAAAAACACATTCCACTAGTCATGAACATCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSVDQDILEEIFQS*QSEKHIPLVMNILL Trigger: CAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGATCTCTTCTAAGATGTCTTGATCGACTGACCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653703.1 ENST00000655596.1 ENST00000660340.1 |
||
| CDS CAA 90 bp | CCTAGGATTTTTGGATCCACAATAACCAGTATAGCCTTCCAGTCTTaGCAATCTGAAAAACACATTCCACTAGTCATGAACATCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRIFGSTITSIAFQS*QSEKHIPLVMNILL Trigger: CAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGCTATACTGGTTATTGTGGATCCAAAAATCCTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671223.1 |
||
| CDS TCA 72 bp | TCGACTTCCATTTATATCCCATGGGTCGAAATTGTGTaGTACGGCCACTTCTTCTTTATTTCAGAGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: STSIYIPWVEIV*YGHFFFISEKE Trigger: TTCCTTCTCTGAAATAAAGAAGAAGTGGCCGTATCACACAATTTCGACCCATGGGATATAAATGGAAGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514892.1 |
||
| CDS CCA 72 bp | ACAGCTTTATTCCCATGTTTGGGATCTTGGCAGAGCTaGATTCTACTGGGCTCACTATTTTATTTTGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: TALFPCLGSWQS*ILLGSLFYFVI Trigger: GATTACAAAATAAAATAGTGAGCCCAGTAGAATCCAGCTCTGCCAAGATCCCAAACATGGGAATAAAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654449.1 |
||
| CDS CAA 72 bp | TGTGCAGTCTCCTATGGAACTATGCATGGAACATCCTaGGCATCAGAGTGCTCAATTATATATCTTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CAVSYGTMHGTS*ASECSIIYLLS Trigger: AGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATAGGAGACTGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS TCA 72 bp | CACAATAACCAGTATAGCCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HNNQYSLPVFAI*KTHSTSHEHPL Trigger: AAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGCTATACTGGTTATTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671223.1 |
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| CDS GCA 72 bp | AGAAAACAAGTGACCTTGTTTAATCTCCTTGTCACCTaGACCTTCCAGTCTTTGCAATCTGAAAAACACATT | + |
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Preference number: 6 (lower is better) Translates to: RKQVTLFNLLVT*TFQSLQSEKHI Trigger: AATGTGTTTTTCAGATTGCAAAGACTGGAAGGTGCAGGTGACAAGGAGATTAAACAAGGTCACTTGTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000508724.1 ENST00000514892.1 |
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| CDS GCA 72 bp | AGAAAGATGAGTAACTCACCATCCTTGGCATCAGAGTaGTCAATTATATATCTTTTGTCTCATGACTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RKMSNSPSLASE*SIIYLLSHDSC Trigger: GCAAGAGTCATGAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGGTGAGTTACTCATCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653703.1 |
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| CDS GCA 72 bp | TATGGAACTATGCATGGAACATCCTTGGCATCAGAGTaGTCAATTATATATCTTTTGTCTCATGACTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: YGTMHGTSLASE*SIIYLLSHDSC Trigger: GCAAGAGTCATGAGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGTTCCATGCATAGTTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657908.1 |
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| CDS CAA 72 bp | TTTATAACAGATGCTATATACGCTGTAGTCAGGCATTaGGTTAATTGCTTCTCTGATGGAGAGACCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FITDAIYAVVRH*VNCFSDGETIF Trigger: GAAGATGGTCTCTCCATCAGAGAAGCAATTAACCAAATGCCTGACTACAGCGTATATAGCATCTGTTATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS CAA 72 bp | TCTGAAAAACACATTCCACTAGTCATGAACATCCTCTaGACTGTACATATGCTCCACCTTAACCTTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: SEKHIPLVMNIL*TVHMLHLNLVS Trigger: AGATACAAGGTTAAGGTGGAGCATATGTACAGTCAAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS TCA 72 bp | AGACATGTCATTTCTAACCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RHVISNLPVFAI*KTHSTSHEHPL Trigger: AAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGGTTAGAAATGACATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654449.1 |
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| CDS TCA 72 bp | AGACATCTTAGAAGAGATCTTCCAGTCTTTGCAATCTaGAAAACACATTCCACTAGTCATGAACATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RHLRRDLPVFAI*KTHSTSHEHPL Trigger: AAGAGGATGTTCATGACTAGTGGAATGTGTTTTTCAGATTGCAAAGACTGGAAGATCTCTTCTAAGATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653703.1 ENST00000655596.1 ENST00000660340.1 |
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| CDS TCA 72 bp | ATGCCTTCAAACACACTAGTTTGGACACAAACAGACTaGAGTGGCAGTAAAAATTCTTCCTTGAATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: MPSNTLVWTQTD*SGSKNSSLNFP Trigger: AGGAAAATTCAAGGAAGAATTTTTACTGCCACTTCAGTCTGTTTGTGTCCAAACTAGTGTGTTTGAAGGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664364.1 |
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| CDS GCA 72 bp | TTATATATCTTTTGTCTCATGACTCTTGCAGGGCCTTaGAGTAGAGTAGGTGGAATATTTATTCTTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LYIFCLMTLAGP*SRVGGIFILMQ Trigger: CTGCATAAGAATAAATATTCCACCTACTCTACTGCAAGGCCCTGCAAGAGTCATGAGACAAAAGATATATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653703.1 ENST00000657591.1 ENST00000657908.1 |
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| CDS CAA 72 bp | ATAGCCTGGAATAGAAAGATGAGTAACTCACCATCCTaGGCATCAGAGTGCTCAATTATATATCTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: IAWNRKMSNSPS*ASECSIIYLLS Trigger: AGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGGTGAGTTACTCATCTTTCTATTCCAGGCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653703.1 |
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| CDS CAA 90 bp | TTTTATGCTTTTATAACAGATGCTATATACGCTGTAGTCAGGCATTaGGTTAATTGCTTCTCTGATGGAGAGACCATCTTCAGTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FYAFITDAIYAVVRH*VNCFSDGETIFSCK Trigger: TTTGCAACTGAAGATGGTCTCTCCATCAGAGAAGCAATTAACCAAATGCCTGACTACAGCGTATATAGCATCTGTTATAAAAGCATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000508724.1 ENST00000514892.1 ENST00000653703.1 ENST00000654449.1 ENST00000655596.1 ENST00000660340.1 ENST00000671223.1 |
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| CDS CAA 90 bp | GTAATCTCCTCTCTTCTAATAATGAATAGAGGGAAACAAATGCATTaGCCATCCTTGGCATCAGAGTGCTCAATTATATATCTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VISSLLIMNRGKQMH*PSLASECSIIYLLS Trigger: AGACAAAAGATATATAATTGAGCACTCTGATGCCAAGGATGGCAAATGCATTTGTTTCCCTCTATTCATTATTAGAAGAGAGGAGATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657591.1 |
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| CDS GCA 72 bp | AATATTGTAATCAATCTTCAGCTGGGAGTTGGTTCCTaGATTGAAGTAATCTTTTGTTGGAGAGAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: NIVINLQLGVGS*IEVIFCWRENS Trigger: TGAATTCTCTCTCCAACAAAAGATTACTTCAATGCAGGAACCAACTCCCAGCTGAAGATTGATTACAATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660340.1 |
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| CDS CCA 72 bp | ATTAAAACTTTCATATGTAATCATTCTGACTTGTCTTaGATGCAAGTGTCTTACGTGGATCTGCTATGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IKTFICNHSDLS*MQVSYVDLLCV Trigger: TACACATAGCAGATCCACGTAAGACACTTGCATCCAAGACAAGTCAGAATGATTACATATGAAAGTTTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000513875.5 ENST00000661425.1 ENST00000669757.1 |
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| CDS CAA 72 bp | AGAAGAGATCTGTTCCTTTTATGGTCCCATTGCCTTTaGCATTTTTCCATATTTAGTGCTTATGTTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: RRDLFLLWSHCL*HFSIFSAYVCF Trigger: AAAGCAAACATAAGCACTAAATATGGAAAAATGCAAAAGGCAATGGGACCATAAAAGGAACAGATCTCTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513875.5 ENST00000671223.1 |
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| CDS CAA 72 bp | TCTCTTCTAATAATGAATAGAGGGAAACAAATGCATTaGCCATCCTTGGCATCAGAGTGCTCAATTATATAT | + |
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Preference number: 6 (lower is better) Translates to: SLLIMNRGKQMH*PSLASECSIIY Trigger: ATATATAATTGAGCACTCTGATGCCAAGGATGGCAAATGCATTTGTTTCCCTCTATTCATTATTAGAAGAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657591.1 |
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