Pregenerated sensors for LINC02459 (Homo sapiens)
Ensembl gene IDs: ENSG00000257476Ensembl transcript IDs: ENST00000551761.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGTCTCCCAACTGCCCCTTCGAAACTTGGGCTGCAAATTCTGTTTaGCCCTTTGATTTCTTCACCCCATCTGTGTCCTGGGAGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: MSPNCPFETWAANSV*PFDFFTPSVSWEAG Trigger: CCCAGCCTCCCAGGACACAGATGGGGTGAAGAAATCAAAGGGGCAAACAGAATTTGCAGCCCAAGTTTCGAAGGGGCAGTTGGGAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | CCACTGAGTAACTGTCTCTTGCTGTGTGGAAGACGGTGGCTTGGTTaGAGAAAGCCTAAAGATGTCTCCCAACTGCCCCTTCGAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: PLSNCLLLCGRRWLG*RKPKDVSQLPLRNL Trigger: CAAGTTTCGAAGGGGCAGTTGGGAGACATCTTTAGGCTTTCTGCAACCAAGCCACCGTCTTCCACACAGCAAGAGACAGTTACTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS TCA 90 bp | ATCCAATGCACAGAGCGGTATGCAACTGAAGGCTTATTCCTCCACTaGGTAACTGTCTCTTGCTGTGTGGAAGACGGTGGCTTGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: IQCTERYATEGLFLH*VTVSCCVEDGGLVA Trigger: TGCAACCAAGCCACCGTCTTCCACACAGCAAGAGACAGTTACTCAGTGGAGGAATAAGCCTTCAGTTGCATACCGCTCTGTGCATTGGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | GAAGACGGTGGCTTGGTTGCAGAAAGCCTAAAGATGTCTCCCAACTaGCCCTTCGAAACTTGGGCTGCAAATTCTGTTTGCCCCTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: EDGGLVAESLKMSPN*PFETWAANSVCPFD Trigger: ATCAAAGGGGCAAACAGAATTTGCAGCCCAAGTTTCGAAGGGGCAGTTGGGAGACATCTTTAGGCTTTCTGCAACCAAGCCACCGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 90 bp | CTTATTCCTCCACTGAGTAACTGTCTCTTGCTGTGTGGAAGACGGTaGCTTGGTTGCAGAAAGCCTAAAGATGTCTCCCAACTGCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LIPPLSNCLLLCGRR*LGCRKPKDVSQLPL Trigger: AAGGGGCAGTTGGGAGACATCTTTAGGCTTTCTGCAACCAAGCCACCGTCTTCCACACAGCAAGAGACAGTTACTCAGTGGAGGAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | ACTTGCTCTGCAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTaGACAGCGCTGGTGGATTCATGGAATAAAGCCACAGTATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: TCSAKICSPSTEKLW*TALVDSWNKATVWS Trigger: GCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS TCA 90 bp | AAAGTTTCAAAATCCTCCCATCCAATGCACAGAGCGGTATGCAACTaGAGGCTTATTCCTCCACTGAGTAACTGTCTCTTGCTGTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KVSKSSHPMHRAVCN*RLIPPLSNCLLLCG Trigger: TCCACACAGCAAGAGACAGTTACTCAGTGGAGGAATAAGCCTTCAGTTGCATACCGCTCTGTGCATTGGATGGGAGGATTTTGAAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | GGTCAAAATCACGGCTCTATTGTCTTCTATCTTCCTGCTGGGTTTTaGTTGACAGGATTACATGATCACAGCACAGGTAAAGTGCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GQNHGSIVFYLPAGF*LTGLHDHSTGKVPG Trigger: ACCAGGCACTTTACCTGTGCTGTGATCATGTAATCCTGTCAAGCAAAACCCAGCAGGAAGATAGAAGACAATAGAGCCGTGATTTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | TATTATCCAGGCTTCAGGCACCCAACCTCTTATCTGTACTTGCTCTaGAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: YYPGFRHPTSYLYLL*KNMFSLHRETLVHS Trigger: GCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGTACAGATAAGAGGTTGGGTGCCTGAAGCCTGGATAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 90 bp | TCTCCCTCCACAGAGAAACTTTGGTGCACAGCGCTGGTGGATTCATaGAATAAAGCCACAGTATGGAGCTTCCAAAAGTTTCAAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: SPSTEKLWCTALVDS*NKATVWSFQKFQNP Trigger: AGGATTTTGAAACTTTTGGAAGCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 90 bp | TGTACTTGCTCTGCAAAAATATGTTCTCCCTCCACAGAGAAACTTTaGTGCACAGCGCTGGTGGATTCATGGAATAAAGCCACAGTATGG | + |
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Preference number: 5 (lower is better) Translates to: CTCSAKICSPSTEKL*CTALVDSWNKATVW Trigger: CCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 90 bp | AAATATGTTCTCCCTCCACAGAGAAACTTTGGTGCACAGCGCTGGTaGATTCATGGAATAAAGCCACAGTATGGAGCTTCCAAAAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: KYVLPPQRNFGAQRW*IHGIKPQYGASKSF Trigger: GAAACTTTTGGAAGCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 90 bp | CAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTGCACAGCGCTaGTGGATTCATGGAATAAAGCCACAGTATGGAGCTTCCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: QKYVLPPQRNFGAQR*WIHGIKPQYGASKS Trigger: ACTTTTGGAAGCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 90 bp | TCTATTATTATCCAGGCTTCAGGCACCCAACCTCTTATCTGTACTTaGTCTGCAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SIIIQASGTQPLICT*SAKICSPSTEKLWC Trigger: GCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGTACAGATAAGAGGTTGGGTGCCTGAAGCCTGGATAATAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 72 bp | CTCCCTCCACAGAGAAACTTTGGTGCACAGCGCTGGTaGATTCATGGAATAAAGCCACAGTATGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LPPQRNFGAQRW*IHGIKPQYGAS Trigger: GGAAGCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CAA 72 bp | CCTTCGAAACTTGGGCTGCAAATTCTGTTTGCCCCTTaGATTTCTTCACCCCATCTGTGTCCTGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSKLGLQILFAP*ISSPHLCPGRL Trigger: CAGCCTCCCAGGACACAGATGGGGTGAAGAAATCAAAGGGGCAAACAGAATTTGCAGCCCAAGTTTCGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 72 bp | AACTGCCCCTTCGAAACTTGGGCTGCAAATTCTGTTTaGCCCTTTGATTTCTTCACCCCATCTGTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: NCPFETWAANSV*PFDFFTPSVSW Trigger: CCAGGACACAGATGGGGTGAAGAAATCAAAGGGGCAAACAGAATTTGCAGCCCAAGTTTCGAAGGGGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS TCA 72 bp | AAATCCTCCCATCCAATGCACAGAGCGGTATGCAACTaGAGGCTTATTCCTCCACTGAGTAACTGTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KSSHPMHRAVCN*RLIPPLSNCLL Trigger: CAAGAGACAGTTACTCAGTGGAGGAATAAGCCTTCAGTTGCATACCGCTCTGTGCATTGGATGGGAGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 72 bp | AGCCTAAAGATGTCTCCCAACTGCCCCTTCGAAACTTaGGCTGCAAATTCTGTTTGCCCCTTTGATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLKMSPNCPFET*AANSVCPFDFF Trigger: GAAGAAATCAAAGGGGCAAACAGAATTTGCAGCCCAAGTTTCGAAGGGGCAGTTGGGAGACATCTTTAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 72 bp | TGGAGCTTCCAAAAGTTTCAAAATCCTCCCATCCAATaGACAGAGCGGTATGCAACTGAAGGCTTATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: WSFQKFQNPPIQ*TERYATEGLFL Trigger: GAGGAATAAGCCTTCAGTTGCATACCGCTCTGTGCATTGGATGGGAGGATTTTGAAACTTTTGGAAGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 72 bp | GCAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTaGACAGCGCTGGTGGATTCATGGAATAAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: AKICSPSTEKLW*TALVDSWNKAT Trigger: TGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 72 bp | ATCCAGGCTTCAGGCACCCAACCTCTTATCTGTACTTaGTCTGCAAAAATATGTTCTCCCTCCACAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: IQASGTQPLICT*SAKICSPSTEK Trigger: TTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGTACAGATAAGAGGTTGGGTGCCTGAAGCCTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 72 bp | TCTGCAAAAATATGTTCTCCCTCCACAGAGAAACTTTaGTGCACAGCGCTGGTGGATTCATGGAATAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SAKICSPSTEKL*CTALVDSWNKA Trigger: GGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS TCA 72 bp | GCTCTATTGTCTTCTATCTTCCTGCTGGGTTTTGCTTaGCAGGATTACATGATCACAGCACAGGTAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALLSSIFLLGFA*QDYMITAQVKC Trigger: GCACTTTACCTGTGCTGTGATCATGTAATCCTGTCAAGCAAAACCCAGCAGGAAGATAGAAGACAATAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS GCA 72 bp | CACGGCTCTATTGTCTTCTATCTTCCTGCTGGGTTTTaGTTGACAGGATTACATGATCACAGCACAGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: HGSIVFYLPAGF*LTGLHDHSTGK Trigger: TTTACCTGTGCTGTGATCATGTAATCCTGTCAAGCAAAACCCAGCAGGAAGATAGAAGACAATAGAGCCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CCA 72 bp | ACAGAGAAACTTTGGTGCACAGCGCTGGTGGATTCATaGAATAAAGCCACAGTATGGAGCTTCCAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: TEKLWCTALVDS*NKATVWSFQKF Trigger: AAACTTTTGGAAGCTCCATACTGTGGCTTTATTCCATGAATCCACCAGCGCTGTGCACCAAAGTTTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CAA 72 bp | GGCTCTATTGTCTTCTATCTTCCTGCTGGGTTTTGCTaGACAGGATTACATGATCACAGCACAGGTAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSIVFYLPAGFC*TGLHDHSTGKV Trigger: CACTTTACCTGTGCTGTGATCATGTAATCCTGTCAAGCAAAACCCAGCAGGAAGATAGAAGACAATAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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| CDS CAA 90 bp | TTCTATTATTATCCAGGCTTCAGGCACCCAACCTCTTATCTGTACTaGCTCTGCAAAAATATGTTCTCCCTCCACAGAGAAACTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FYYYPGFRHPTSYLY*LCKNMFSLHRETLV Trigger: CACCAAAGTTTCTCTGTGGAGGGAGAACATATTTTTGCAGAGCAAGTACAGATAAGAGGTTGGGTGCCTGAAGCCTGGATAATAATAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551761.1 |
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