Pregenerated sensors for LINC02457 (Homo sapiens)
Ensembl gene IDs: ENSG00000258018Ensembl transcript IDs: ENST00000552992.1, ENST00000659057.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGTCGTCACCTACAGCGCCACCGCGCTGGTCCTAAGGTACAGGTCTaGCCTGCCCCAAACCCTTCAAGTCTTCAGGCCGGCCCCAAGCTA | + |
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Preference number: 5 (lower is better) Translates to: RRHLQRHRAGPKVQV*PAPNPSSLQAGPKL Trigger: TAGCTTGGGGCCGGCCTGAAGACTTGAAGGGTTTGGGGCAGGGCAGACCTGTACCTTAGGACCAGCGCGGTGGCGCTGTAGGTGACGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 90 bp | TCTGTGTTGGTAGCAGAGCTGGGCATCCTGGCTCCTCGTCCACCGTaGGTCACGTCGCCGCTCCGCCTGGCATCTGGAGGTACAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: SVLVAELGILAPRPP*VTSPLRLASGGTTL Trigger: CAGAGTTGTACCTCCAGATGCCAGGCGGAGCGGCGACGTGACGCACGGTGGACGAGGAGCCAGGATGCCCAGCTCTGCTACCAACACAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | TCCGCCTGGCATCTGGAGGTACAACTCTGTGTTTCCTTCATGCGATaGGCTGGCTCCCACGCTCCTGGGGCCTTCCACTGCAGCGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SAWHLEVQLCVSFMR*AGSHAPGAFHCSAD Trigger: GTCTGCGCTGCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACACAGAGTTGTACCTCCAGATGCCAGGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | ACAACTCTGTGTTTCCTTCATGCGATGAGCTGGCTCCCACGCTCCTaGGGCCTTCCACTGCAGCGCAGACCTCCCCTGGGAGAGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: TTLCFLHAMSWLPRS*GLPLQRRPPLGELH Trigger: ATGCAGCTCTCCCAGGGGAGGTCTGCGCTGCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACACAGAGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | CTGGCATCTGGAGGTACAACTCTGTGTTTCCTTCATGCGATGAGCTaGCTCCCACGCTCCTGGGGCCTTCCACTGCAGCGCAGACCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LASGGTTLCFLHAMS*LPRSWGLPLQRRPP Trigger: GGGAGGTCTGCGCTGCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACACAGAGTTGTACCTCCAGATGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | CAGGCCGGCCCCAAGCTACAGCTCAAGGCTCACTTTGACCTTGCGTaGCCCTGTCTCCATAGCTCATTTCCGGCATCGTCCTTTCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: QAGPKLQLKAHFDLA*PCLHSSFPASSFLA Trigger: CGCCAGAAAGGACGATGCCGGAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGGGCCGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | CAGCAATCTGTCAGCCCAGGGCCAAGTCCTCCCCACTGTCCAAATTaGAGGACCCCAAGGCCCTTCCTGCTGCACCAATGGCCAAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: QQSVSPGPSPPHCPN*RTPRPFLLHQWPRV Trigger: CACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATTTGGACAGTGGGGAGGACTTGGCCCTGGGCTGACAGATTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 90 bp | TCTCCGAAGTCTGTAAGCCGCTTTGCTTGGTGGGAGGGGGCTGCCTaGATTGGCATTGACTCTTGCCTCCCCACGTCACACCATGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SPKSVSRFAWWEGAA*IGIDSCLPTSHHAD Trigger: GTCAGCATGGTGTGACGTGGGGAGGCAAGAGTCAATGCCAATGCAGGCAGCCCCCTCCCACCAAGCAAAGCGGCTTACAGACTTCGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | ATGGTGCTTCCTAGACCTGTGCAATTGGGGGTCCTGGCCTGCCTCTaGTGCTCACTAATACATGACCTGAGCAAGTTGCGAGCTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: MVLPRPVQLGVLACL*CSLIHDLSKLRAAS Trigger: AGAGGCAGCTCGCAACTTGCTCAGGTCATGTATTAGTGAGCATCAGAGGCAGGCCAGGACCCCCAATTGCACAGGTCTAGGAAGCACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | TGTAGATGTTTTGTTTCCTCTCCGAAGTCTGTAAGCCGCTTTGCTTaGTGGGAGGGGGCTGCCTGCATTGGCATTGACTCTTGCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: CRCFVSSPKSVSRFA*WEGAACIGIDSCLP Trigger: GGGGAGGCAAGAGTCAATGCCAATGCAGGCAGCCCCCTCCCACCAAGCAAAGCGGCTTACAGACTTCGGAGAGGAAACAAAACATCTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | TGTGCAATTGGGGGTCCTGGCCTGCCTCTGATGCTCACTAATACATaGCCTGAGCAAGTTGCGAGCTGCCTCTGGGTCTCTGTTTTATGG | + |
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Preference number: 5 (lower is better) Translates to: CAIGGPGLPLMLTNT*PEQVASCLWVSVLW Trigger: CCATAAAACAGAGACCCAGAGGCAGCTCGCAACTTGCTCAGGTCATGTATTAGTGAGCATCAGAGGCAGGCCAGGACCCCCAATTGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | TCTGCAGGTTACCCCCAAGGAGCCATCGCTAATGCTGGAGATTGCTaGCACCATGGTAGGCCAAGGAGGAAGATGTTTCTGTTTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SAGYPQGAIANAGDC*HHGRPRRKMFLFSG Trigger: CCCTGAAAACAGAAACATCTTCCTCCTTGGCCTACCATGGTGCCAGCAATCTCCAGCATTAGCGATGGCTCCTTGGGGGTAACCTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 90 bp | GAGGACCCCAAGGCCCTTCCTGCTGCACCAATGGCCAAGAGTGGATaGAATGAGCGAAATCATTGTGTACTATCAGTGAGCTGGCGATTG | + |
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Preference number: 5 (lower is better) Translates to: EDPKALPAAPMAKSG*NERNHCVLSVSWRL Trigger: CAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 90 bp | GGAGTGATGAGTCCACAAGCCAAGGAACACCCAGAACTACCAAATTaGGAGGGGGCAAATGAGGATCTTCCCCTAGAACCCTCACGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GVMSPQAKEHPELPN*EGANEDLPLEPSRW Trigger: CCAACGTGAGGGTTCTAGGGGAAGATCCTCATTTGCCCCCTCCCAATTTGGTAGTTCTGGGTGTTCCTTGGCTTGTGGACTCATCACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | CCCCAAGGCCCTTCCTGCTGCACCAATGGCCAAGAGTGGATGGAATaGGCGAAATCATTGTGTACTATCAGTGAGCTGGCGATTGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: PQGPSCCTNGQEWME*AKSLCTISELAIAL Trigger: TAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 90 bp | GCTTCTGCAGGTTACCCCCAAGGAGCCATCGCTAATGCTGGAGATTaGTGGCACCATGGTAGGCCAAGGAGGAAGATGTTTCTGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: ASAGYPQGAIANAGD*WHHGRPRRKMFLFS Trigger: TGAAAACAGAAACATCTTCCTCCTTGGCCTACCATGGTGCCAGCAATCTCCAGCATTAGCGATGGCTCCTTGGGGGTAACCTGCAGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 90 bp | CAGACCTCCCCTGGGAGAGCTGCATGGACACATGTTTTCGGAGAATaGAGACTTGGTGCTGATCTTCTGCGTGTTGTAGAGACGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: QTSPGRAAWTHVFGE*RLGADLLRVVETMV Trigger: AACCATCGTCTCTACAACACGCAGAAGATCAGCACCAAGTCTCCATTCTCCGAAAACATGTGTCCATGCAGCTCTCCCAGGGGAGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | ATGAATCAGGGATTCAGGGTGGGCTTGGATCTACATGACAAGCTTTaGCTTGCCTACCTTCCTGGGCTTCCAGAACAAAGCCTGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: MNQGFRVGLDLHDKL*LAYLPGLPEQSLWW Trigger: CCACCACAGGCTTTGTTCTGGAAGCCCAGGAAGGTAGGCAAGTCAAAGCTTGTCATGTAGATCCAAGCCCACCCTGAATCCCTGATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | CACTGTCCAAATTGGAGGACCCCAAGGCCCTTCCTGCTGCACCAATaGCCAAGAGTGGATGGAATGAGCGAAATCATTGTGTACTATCAG | + |
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Preference number: 5 (lower is better) Translates to: HCPNWRTPRPFLLHQ*PRVDGMSEIIVYYQ Trigger: CTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATTTGGACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | TCCAGGGGATATGAATCAGGGATTCAGGGTGGGCTTGGATCTACATaGCAAGCTTTGACTTGCCTACCTTCCTGGGCTTCCAGAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: SRGYESGIQGGLGST*QALTCLPSWASRTK Trigger: CTTTGTTCTGGAAGCCCAGGAAGGTAGGCAAGTCAAAGCTTGTCATGTAGATCCAAGCCCACCCTGAATCCCTGATTCATATCCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 90 bp | GAGCTGCCTCTGGGTCTCTGTTTTATGGTGTATGAAAAGAGACCCTaGCACACCTACCTCCCAGGGTTGTTGAGCACTTCCAAAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ELPLGLCFMVYEKRP*HTYLPGLLSTSKEE Trigger: TTCTTCTTTGGAAGTGCTCAACAACCCTGGGAGGTAGGTGTGGCAGGGTCTCTTTTCATACACCATAAAACAGAGACCCAGAGGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | TCTGATAGTCCTGCAGTTCTTGAGGTTTGGGAAAACCCCCTTGCTTaGGAAGCTACCCACGGGAAGAAGAGGTCTCTAACAGTATACAGC | + |
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Preference number: 5 (lower is better) Translates to: SDSPAVLEVWENPLA*EATHGKKRSLTVYS Trigger: GCTGTATACTGTTAGAGACCTCTTCTTCCCGTGGGTAGCTTCCCAAGCAAGGGGGTTTTCCCAAACCTCAAGAACTGCAGGACTATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | GAGAGCTGCATGGACACATGTTTTCGGAGAATGGAGACTTGGTGCTaGTCTTCTGCGTGTTGTAGAGACGATGGTTTGCTGTCAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ESCMDTCFRRMETWC*SSACCRDDGLLSVP Trigger: AGGAACTGACAGCAAACCATCGTCTCTACAACACGCAGAAGATCAGCACCAAGTCTCCATTCTCCGAAAACATGTGTCCATGCAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 90 bp | CTATCAGTGAGCTGGCGATTGCCTTACTCCTGCAAGGTAATAAGATaGCTTAACCCAGTTAAGAAGCTTCTGCAGGTTACCCCCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LSVSWRLPYSCKVIR*LNPVKKLLQVTPKE Trigger: CTCCTTGGGGGTAACCTGCAGAAGCTTCTTAACTGGGTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 90 bp | GAAATTGATTACAGCAGCATTTGGAAACTGACACCATGTGAGGTGTaGAAATTCCCACTCTGTGTTGGTAGCAGAGCTGGGCATCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: EIDYSSIWKLTPCEV*KFPLCVGSRAGHPG Trigger: GCCAGGATGCCCAGCTCTGCTACCAACACAGAGTGGGAATTTGCACACCTCACATGGTGTCAGTTTCCAAATGCTGCTGTAATCAATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | GACTGTCTCCTCAGTTTCTCAAAGAGATCCATGATCCACCCAAGCTaGAAAGGTATTAAACACCTGGTAGTTGGAACTGCCTTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: DCLLSFSKRSMIHPS*KGIKHLVVGTALAL Trigger: AAGAGCCAAGGCAGTTCCAACTACCAGGTGTTTAATACCTTTTCAGCTTGGGTGGATCATGGATCTCTTTGAGAAACTGAGGAGACAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | ATGCCACATTTGTTCTTGCTTCCCCAAGCTGAAGTTATGGGACCTTaGTCTTTTCTATGTGGTTTCTTGGATGGCTCATCTTGGAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: MPHLFLLPQAEVMGP*SFLCGFLDGSSWRV Trigger: GACTCTCCAAGATGAGCCATCCAAGAAACCACATAGAAAAGATCAAGGTCCCATAACTTCAGCTTGGGGAAGCAAGAACAAATGTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 90 bp | CGAAATCATTGTGTACTATCAGTGAGCTGGCGATTGCCTTACTCCTaGAAGGTAATAAGATGCCTTAACCCAGTTAAGAAGCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RNHCVLSVSWRLPYS*KVIRCLNPVKKLLQ Trigger: CTGCAGAAGCTTCTTAACTGGGTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 90 bp | AAGAGTGGATGGAATGAGCGAAATCATTGTGTACTATCAGTGAGCTaGCGATTGCCTTACTCCTGCAAGGTAATAAGATGCCTTAACCCA | + |
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Preference number: 5 (lower is better) Translates to: KSGWNERNHCVLSVS*RLPYSCKVIRCLNP Trigger: TGGGTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS TCA 90 bp | GCCCATGAGAAAAGCTGCATGTTCAGAACTCCAAAGATTGATTTCTaGCCCAGAGTGAATTTTCATGGAGTTATCAGAAACGAGCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: AHEKSCMFRTPKIDF*PRVNFHGVIRNERL Trigger: AAGGCGCTCGTTTCTGATAACTCCATGAAAATTCACTCTGGGTCAGAAATCAATCTTTGGAGTTCTGAACATGCAGCTTTTCTCATGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | CTGGTAGTTGGAACTGCCTTGGCTCTTGAAGTTGCTCTCTTGCTCTaGAATCTGGTTCAACATTTGCATGTAGATGTTTTGTTTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LVVGTALALEVALLL*NLVQHLHVDVLFPL Trigger: GAGAGGAAACAAAACATCTACATGCAAATGTTGAACCAGATTTCAGAGCAAGAGAGCAACTTCAAGAGCCAAGGCAGTTCCAACTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 90 bp | AGTGAGGAATGCCACATTTGTTCTTGCTTCCCCAAGCTGAAGTTATaGGACCTTGATCTTTTCTATGTGGTTTCTTGGATGGCTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SEECHICSCFPKLKL*DLDLFYVVSWMAHL Trigger: AAGATGAGCCATCCAAGAAACCACATAGAAAAGATCAAGGTCCCATAACTTCAGCTTGGGGAAGCAAGAACAAATGTGGCATTCCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 90 bp | CACCTCTCATCTAGCCGAATCTTAACTGCTTCCCCCACCTCTTCCTaGCAAGTAATAAAGTTAATAATACCTTGTGTGGCTGTTGTATCT | + |
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Preference number: 5 (lower is better) Translates to: HLSSSRILTASPTSS*QVIKLIIPCVAVVS Trigger: AGATACAACAGCCACACAAGGTATTATTAACTTTATTACTTGTCAGGAAGAGGTGGGGGAAGCAGTTAAGATTCGGCTAGATGAGAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 72 bp | CTACAGCGCCACCGCGCTGGTCCTAAGGTACAGGTCTaGCCTGCCCCAAACCCTTCAAGTCTTCAGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LQRHRAGPKVQV*PAPNPSSLQAG Trigger: GCCGGCCTGAAGACTTGAAGGGTTTGGGGCAGGGCAGACCTGTACCTTAGGACCAGCGCGGTGGCGCTGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | TGTTTCCTTCATGCGATGAGCTGGCTCCCACGCTCCTaGGGCCTTCCACTGCAGCGCAGACCTCCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: CFLHAMSWLPRS*GLPLQRRPPLG Trigger: TCCCAGGGGAGGTCTGCGCTGCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | GTCAGCCCAGGGCCAAGTCCTCCCCACTGTCCAAATTaGAGGACCCCAAGGCCCTTCCTGCTGCACCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VSPGPSPPHCPN*RTPRPFLLHQW Trigger: CCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATTTGGACAGTGGGGAGGACTTGGCCCTGGGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | GGAGGTACAACTCTGTGTTTCCTTCATGCGATGAGCTaGCTCCCACGCTCCTGGGGCCTTCCACTGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GGTTLCFLHAMS*LPRSWGLPLQR Trigger: GCGCTGCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACACAGAGTTGTACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | CTCCTCGTCCACCGTGCGTCACGTCGCCGCTCCGCCTaGCATCTGGAGGTACAACTCTGTGTTTCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LLVHRASRRRSA*HLEVQLCVSFM Trigger: CATGAAGGAAACACAGAGTTGTACCTCCAGATGCCAGGCGGAGCGGCGACGTGACGCACGGTGGACGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | TGTCAGCCCAGGGCCAAGTCCTCCCCACTGTCCAAATaGGAGGACCCCAAGGCCCTTCCTGCTGCACCAATG | + |
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Preference number: 6 (lower is better) Translates to: CQPRAKSSPLSK*EDPKALPAAPM Trigger: CATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATTTGGACAGTGGGGAGGACTTGGCCCTGGGCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 90 bp | GCAGCAATCTGTCAGCCCAGGGCCAAGTCCTCCCCACTGTCCAAATaGGAGGACCCCAAGGCCCTTCCTGCTGCACCAATGGCCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: AAICQPRAKSSPLSK*EDPKALPAAPMAKS Trigger: ACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATTTGGACAGTGGGGAGGACTTGGCCCTGGGCTGACAGATTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 90 bp | GTCTTCAGGCCGGCCCCAAGCTACAGCTCAAGGCTCACTTTGACCTaGCGTGGCCCTGTCTCCATAGCTCATTTCCGGCATCGTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VFRPAPSYSSRLTLT*RGPVSIAHFRHRPF Trigger: GAAAGGACGATGCCGGAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGGGCCGGCCTGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | CATCTGGAGGTACAACTCTGTGTTTCCTTCATGCGATaGGCTGGCTCCCACGCTCCTGGGGCCTTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: HLEVQLCVSFMR*AGSHAPGAFHC Trigger: GCAGTGGAAGGCCCCAGGAGCGTGGGAGCCAGCTCATCGCATGAAGGAAACACAGAGTTGTACCTCCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | GGGGGTCCTGGCCTGCCTCTGATGCTCACTAATACATaGCCTGAGCAAGTTGCGAGCTGCCTCTGGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGPGLPLMLTNT*PEQVASCLWVS Trigger: AGAGACCCAGAGGCAGCTCGCAACTTGCTCAGGTCATGTATTAGTGAGCATCAGAGGCAGGCCAGGACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | CATGGAGGGGTCCCTGCTGAGCCACAGAGATCGCTATaGAGAGTGTGGATTTTGGCCAGGTGCGGTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: HGGVPAEPQRSL*RVWILARCGGS Trigger: TGAGCCACCGCACCTGGCCAAAATCCACACTCTTCATAGCGATCTCTGTGGCTCAGCAGGGACCCCTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 72 bp | GCCTTCCACTGCAGCGCAGACCTCCCCTGGGAGAGCTaGATGGACACATGTTTTCGGAGAATGGAGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: AFHCSADLPWES*MDTCFRRMETW Trigger: CCAAGTCTCCATTCTCCGAAAACATGTGTCCATGCAGCTCTCCCAGGGGAGGTCTGCGCTGCAGTGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | CCGGCCCCAAGCTACAGCTCAAGGCTCACTTTGACCTaGCGTGGCCCTGTCTCCATAGCTCATTTCCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PAPSYSSRLTLT*RGPVSIAHFRH Trigger: ATGCCGGAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGGGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 90 bp | CTTCAAGTCTTCAGGCCGGCCCCAAGCTACAGCTCAAGGCTCACTTaGACCTTGCGTGGCCCTGTCTCCATAGCTCATTTCCGGCATCGT | + |
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Preference number: 6 (lower is better) Translates to: LQVFRPAPSYSSRLT*TLRGPVSIAHFRHR Trigger: ACGATGCCGGAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGGGCCGGCCTGAAGACTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | CCCAAGCTACAGCTCAAGGCTCACTTTGACCTTGCGTaGCCCTGTCTCCATAGCTCATTTCCGGCATCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PKLQLKAHFDLA*PCLHSSFPASS Trigger: GGACGATGCCGGAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | GTTTCCTCTCCGAAGTCTGTAAGCCGCTTTGCTTGGTaGGAGGGGGCTGCCTGCATTGGCATTGACTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: VSSPKSVSRFAW*EGAACIGIDSC Trigger: GCAAGAGTCAATGCCAATGCAGGCAGCCCCCTCCCACCAAGCAAAGCGGCTTACAGACTTCGGAGAGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | TTCAGGCCGGCCCCAAGCTACAGCTCAAGGCTCACTTaGACCTTGCGTGGCCCTGTCTCCATAGCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: FRPAPSYSSRLT*TLRGPVSIAHF Trigger: GAAATGAGCTATGGAGACAGGGCCACGCAAGGTCAAAGTGAGCCTTGAGCTGTAGCTTGGGGCCGGCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 72 bp | ACTTGGCAATGCAGGCTAGGCTGTCTGAGGATCACCTaGAGAACTTCAAAGCTGAAGGGGAACTCGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TWQCRLGCLRIT*RTSKLKGNSGL Trigger: GAGCCCCGAGTTCCCCTTCAGCTTTGAAGTTCTGCAGGTGATCCTCAGACAGCCTAGCCTGCATTGCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | GGGGCAAATGAGGATCTTCCCCTAGAACCCTCACGTTaGTTTCAGGCTTCTGGGCTCCAGAACTGTCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GANEDLPLEPSR*FQASGLQNCQR Trigger: TCGCTGACAGTTCTGGAGCCCAGAAGCCTGAAACCAACGTGAGGGTTCTAGGGGAAGATCCTCATTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | TACCCCCAAGGAGCCATCGCTAATGCTGGAGATTGCTaGCACCATGGTAGGCCAAGGAGGAAGATGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YPQGAIANAGDC*HHGRPRRKMFL Trigger: CAGAAACATCTTCCTCCTTGGCCTACCATGGTGCCAGCAATCTCCAGCATTAGCGATGGCTCCTTGGGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS TCA 72 bp | TTGCGAGCTGCCTCTGGGTCTCTGTTTTATGGTGTATaGAAAGAGACCCTGCCACACCTACCTCCCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRAASGSLFYGV*KETLPHLPPRV Trigger: AACCCTGGGAGGTAGGTGTGGCAGGGTCTCTTTTCATACACCATAAAACAGAGACCCAGAGGCAGCTCGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | AATTGGAGGACCCCAAGGCCCTTCCTGCTGCACCAATaGCCAAGAGTGGATGGAATGAGCGAAATCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: NWRTPRPFLLHQ*PRVDGMSEIIV Trigger: CACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTTGGGGTCCTCCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 72 bp | AGTCCACAAGCCAAGGAACACCCAGAACTACCAAATTaGGAGGGGGCAAATGAGGATCTTCCCCTAGAACCC | + |
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Preference number: 6 (lower is better) Translates to: SPQAKEHPELPN*EGANEDLPLEP Trigger: GGGTTCTAGGGGAAGATCCTCATTTGCCCCCTCCCAATTTGGTAGTTCTGGGTGTTCCTTGGCTTGTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | CCTGCAGTTCTTGAGGTTTGGGAAAACCCCCTTGCTTaGGAAGCTACCCACGGGAAGAAGAGGTCTCTAACA | + |
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Preference number: 6 (lower is better) Translates to: PAVLEVWENPLA*EATHGKKRSLT Trigger: TGTTAGAGACCTCTTCTTCCCGTGGGTAGCTTCCCAAGCAAGGGGGTTTTCCCAAACCTCAAGAACTGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | GAGCAAGTTGCGAGCTGCCTCTGGGTCTCTGTTTTATaGTGTATGAAAAGAGACCCTGCCACACCTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: EQVASCLWVSVL*CMKRDPATPTS Trigger: GGAGGTAGGTGTGGCAGGGTCTCTTTTCATACACCATAAAACAGAGACCCAGAGGCAGCTCGCAACTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | ATAGTCCTGCAGTTCTTGAGGTTTGGGAAAACCCCCTaGCTTGGGAAGCTACCCACGGGAAGAAGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: IVLQFLRFGKTP*LGKLPTGRRGL Trigger: GAGACCTCTTCTTCCCGTGGGTAGCTTCCCAAGCAAGGGGGTTTTCCCAAACCTCAAGAACTGCAGGACTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 90 bp | GAGGGGAAAGCTTGGCAAGCGCTAGGAACTGACAGAAGGTCAGGGTaGCTGGAGTGTAATGAACAAGAAAGGCAGTGGCAAGAGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: EGKAWQALGTDRRSG*LECNEQERQWQERG Trigger: TCCTCTCTCTTGCCACTGCCTTTCTTGTTCATTACACTCCAGCAACCCTGACCTTCTGTCAGTTCCTAGCGCTTGCCAAGCTTTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | CCTTCCTGCTGCACCAATGGCCAAGAGTGGATGGAATaGGCGAAATCATTGTGTACTATCAGTGAGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PSCCTNGQEWME*AKSLCTISELA Trigger: CGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 72 bp | CTGGGTCTCTGTTTTATGGTGTATGAAAAGAGACCCTaGCACACCTACCTCCCAGGGTTGTTGAGCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LGLCFMVYEKRP*HTYLPGLLSTS Trigger: GGAAGTGCTCAACAACCCTGGGAGGTAGGTGTGGCAGGGTCTCTTTTCATACACCATAAAACAGAGACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | CCTGGGAGAGCTGCATGGACACATGTTTTCGGAGAATaGAGACTTGGTGCTGATCTTCTGCGTGTTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: PGRAAWTHVFGE*RLGADLLRVVE Trigger: CTCTACAACACGCAGAAGATCAGCACCAAGTCTCCATTCTCCGAAAACATGTGTCCATGCAGCTCTCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | TATGAATCAGGGATTCAGGGTGGGCTTGGATCTACATaGCAAGCTTTGACTTGCCTACCTTCCTGGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: YESGIQGGLGST*QALTCLPSWAS Trigger: GGAAGCCCAGGAAGGTAGGCAAGTCAAAGCTTGTCATGTAGATCCAAGCCCACCCTGAATCCCTGATTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 72 bp | TACAGCAGCATTTGGAAACTGACACCATGTGAGGTGTaGAAATTCCCACTCTGTGTTGGTAGCAGAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: YSSIWKLTPCEV*KFPLCVGSRAG Trigger: CCCAGCTCTGCTACCAACACAGAGTGGGAATTTGCACACCTCACATGGTGTCAGTTTCCAAATGCTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | AAGGCCCTTCCTGCTGCACCAATGGCCAAGAGTGGATaGAATGAGCGAAATCATTGTGTACTATCAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KALPAAPMAKSG*NERNHCVLSVS Trigger: GCTCACTGATAGTACACAATGATTTCGCTCATTCCATCCACTCTTGGCCATTGGTGCAGCAGGAAGGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS TCA 72 bp | GGGAAACCACCTGGCCTGCTCCTGGTTCCCATTAGCTaGCTAACTCAAGGAGAAAGTGAGTTAGGAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GKPPGLLLVPIS*LTQGESELGVF Trigger: AAAAACTCCTAACTCACTTTCTCCTTGAGTTAGTCAGCTAATGGGAACCAGGAGCAGGCCAGGTGGTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | ATATATGCCTGTAAATGGTTATCAGAAGACCCTGGCTaGGGTCCTCTAGAGCTGCTGCACTGCCTAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: IYACKWLSEDPG*GPLELLHCLTP Trigger: TGGAGTTAGGCAGTGCAGCAGCTCTAGAGGACCTCAGCCAGGGTCTTCTGATAACCATTTACAGGCATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | TATGGGACCTTGATCTTTTCTATGTGGTTTCTTGGATaGCTCATCTTGGAGAGTCACGCTTTCACCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: YGTLIFSMWFLG*LILESHAFTSP Trigger: CGGGCTGGTGAAAGCGTGACTCTCCAAGATGAGCCATCCAAGAAACCACATAGAAAAGATCAAGGTCCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | GGCTGTTGTATCTTTCTTCGCAAGAACTCCAAACACTaGGCTTCATCCTCATTTCTGCCACCTGGGACCACA | + |
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Preference number: 6 (lower is better) Translates to: GCCIFLRKNSKH*ASSSFLPPGTT Trigger: TGTGGTCCCAGGTGGCAGAAATGAGGATGAAGCCAAGTGTTTGGAGTTCTTGCGAAGAAAGATACAACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552992.1 |
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| CDS TCA 72 bp | ATGGACACATGTTTTCGGAGAATGGAGACTTGGTGCTaGTCTTCTGCGTGTTGTAGAGACGATGGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: MDTCFRRMETWC*SSACCRDDGLL Trigger: CAGCAAACCATCGTCTCTACAACACGCAGAAGATCAGCACCAAGTCTCCATTCTCCGAAAACATGTGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 90 bp | GGATGGAATGAGCGAAATCATTGTGTACTATCAGTGAGCTGGCGATaGCCTTACTCCTGCAAGGTAATAAGATGCCTTAACCCAGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: GWNERNHCVLSVSWR*PYSCKVIRCLNPVK Trigger: CTTAACTGGGTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 72 bp | TGTGTACTATCAGTGAGCTGGCGATTGCCTTACTCCTaGAAGGTAATAAGATGCCTTAACCCAGTTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CVLSVSWRLPYS*KVIRCLNPVKK Trigger: CTTCTTAACTGGGTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS GCA 72 bp | AGGGGATCTCCCTGGATAACCCAAGTAGGCCCTAAATaGAATCACTCATATCCTTACAAATTAGACATGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGSPWITQVGPK*NHSYPYKLDMQ Trigger: CTGCATGTCTAATTTGTAAGGATATGAGTGATTGCATTTAGGGCCTACTTGGGTTATCCAGGGAGATCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CCA 72 bp | TGGAATGAGCGAAATCATTGTGTACTATCAGTGAGCTaGCGATTGCCTTACTCCTGCAAGGTAATAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: WNERNHCVLSVS*RLPYSCKVIRC Trigger: GCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTCATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS CCA 72 bp | AGCCACCACTTTGTGGAAATTGATTACAGCAGCATTTaGAAACTGACACCATGTGAGGTGTGCAAATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SHHFVEIDYSSI*KLTPCEVCKFP Trigger: TGGGAATTTGCACACCTCACATGGTGTCAGTTTCCAAATGCTGCTGTAATCAATTTCCACAAAGTGGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS CAA 72 bp | GAGCGAAATCATTGTGTACTATCAGTGAGCTGGCGATaGCCTTACTCCTGCAAGGTAATAAGATGCCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: ERNHCVLSVSWR*PYSCKVIRCLN Trigger: GTTAAGGCATCTTATTACCTTGCAGGAGTAAGGCAATCGCCAGCTCACTGATAGTACACAATGATTTCGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS TCA 72 bp | GGAACTGCCTTGGCTCTTGAAGTTGCTCTCTTGCTCTaGAATCTGGTTCAACATTTGCATGTAGATGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GTALALEVALLL*NLVQHLHVDVL Trigger: CAAAACATCTACATGCAAATGTTGAACCAGATTTCAGAGCAAGAGAGCAACTTCAAGAGCCAAGGCAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | TCTAGCCGAATCTTAACTGCTTCCCCCACCTCTTCCTaGCAAGTAATAAAGTTAATAATACCTTGTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRILTASPTSS*QVIKLIIPCVA Trigger: AGCCACACAAGGTATTATTAACTTTATTACTTGTCAGGAAGAGGTGGGGGAAGCAGTTAAGATTCGGCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000552992.1 ENST00000659057.1 |
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| CDS TCA 72 bp | TGTTCAGAACTCCAAAGATTGATTTCTGACCCAGAGTaGATTTTCATGGAGTTATCAGAAACGAGCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CSELQRLISDPE*IFMELSETSAL Trigger: CAAGGCGCTCGTTTCTGATAACTCCATGAAAATTCACTCTGGGTCAGAAATCAATCTTTGGAGTTCTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | AAAAATATCAGGTACTCTATTGAGATAACATTGTCGTaGACTTGGCAATGCAGGCTAGGCTGTCTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: KNIRYSIEITLS*TWQCRLGCLRI Trigger: GATCCTCAGACAGCCTAGCCTGCATTGCCAAGTTCACGACAATGTTATCTCAATAGAGTACCTGATATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS GCA 72 bp | TCTTCTTTCTTAAGTGAGGAATGCCACATTTGTTCTTaGTTCCCCAAGCTGAAGTTATGGGACCTTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFLSEECHICS*FPKLKLWDLDL Trigger: AAGATCAAGGTCCCATAACTTCAGCTTGGGGAAGCAAGAACAAATGTGGCATTCCTCACTTAAGAAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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| CDS TCA 72 bp | AAAAGCTGCATGTTCAGAACTCCAAAGATTGATTTCTaGCCCAGAGTGAATTTTCATGGAGTTATCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: KSCMFRTPKIDF*PRVNFHGVIRN Trigger: GTTTCTGATAACTCCATGAAAATTCACTCTGGGTCAGAAATCAATCTTTGGAGTTCTGAACATGCAGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659057.1 |
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