Pregenerated sensors for LINC02456 (Homo sapiens)
Ensembl gene IDs: ENSG00000283052Ensembl transcript IDs: ENST00000635615.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGTTCCCGATTGTGAAGGTCTTTACCCACGATGCCCAGCTGCTCTaGGAGATCAATGGACACAAGTGGGTCCTGCAGGTACCTTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: GFPIVKVFTHDAQLL*EINGHKWVLQVPCV Trigger: CACGCAAGGTACCTGCAGGACCCACTTGTGTCCATTGATCTCTCAGAGCAGCTGGGCATCGTGGGTAAAGACCTTCACAATCGGGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS GCA 90 bp | AGATCCAATCTACGGGTTCCCGATTGTGAAGGTCTTTACCCACGATaGCCAGCTGCTCTGAGAGATCAATGGACACAAGTGGGTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RSNLRVPDCEGLYPR*PAALRDQWTQVGPA Trigger: TGCAGGACCCACTTGTGTCCATTGATCTCTCAGAGCAGCTGGGCATCGTGGGTAAAGACCTTCACAATCGGGAACCCGTAGATTGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CCA 90 bp | TGTGAAGGTCTTTACCCACGATGCCCAGCTGCTCTGAGAGATCAATaGACACAAGTGGGTCCTGCAGGTACCTTGCGTGTTTACTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CEGLYPRCPAALRDQ*TQVGPAGTLRVYSA Trigger: TGCTGAGTAAACACGCAAGGTACCTGCAGGACCCACTTGTGTCCATTGATCTCTCAGAGCAGCTGGGCATCGTGGGTAAAGACCTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS TCA 90 bp | CACTGTGAGTTTGTCAAGCACAGCAAATGTTCTCTATTAAAGGGATaGCTGTGTTCTCAACATGGATGCGACTGCCAGTTAATTGCATTC | + |
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Preference number: 5 (lower is better) Translates to: HCEFVKHSKCSLLKG*LCSQHGCDCQLIAF Trigger: GAATGCAATTAACTGGCAGTCGCATCCATGTTGAGAACACAGTCATCCCTTTAATAGAGAACATTTGCTGTGCTTGACAAACTCACAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS GCA 90 bp | AAAGGGATGACTGTGTTCTCAACATGGATGCGACTGCCAGTTAATTaGATTCACCTTATAATTCCAGTCTCTCAATTTGGTGTAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: KGMTVFSTWMRLPVN*IHLIIPVSQFGVEM Trigger: CATCTCTACACCAAATTGAGAGACTGGAATTATAAGGTGAATGCAATTAACTGGCAGTCGCATCCATGTTGAGAACACAGTCATCCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CCA 90 bp | TTACCTCCTTCTAAGTTAGAATATATTTGCACCTCTTCCTTGAAGTaGTTTCCAACCATACTGAATATTGGGCCCAAGCCAGTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPPSKLEYICTSSLK*FPTILNIGPKPVFS Trigger: GGAGAAAACTGGCTTGGGCCCAATATTCAGTATGGTTGGAAACCACTTCAAGGAAGAGGTGCAAATATATTCTAACTTAGAAGGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CCA 90 bp | GCACAGCAAATGTTCTCTATTAAAGGGATGACTGTGTTCTCAACATaGATGCGACTGCCAGTTAATTGCATTCACCTTATAATTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AQQMFSIKGMTVFST*MRLPVNCIHLIIPV Trigger: GACTGGAATTATAAGGTGAATGCAATTAACTGGCAGTCGCATCCATGTTGAGAACACAGTCATCCCTTTAATAGAGAACATTTGCTGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS TCA 90 bp | ACCATTTTCAGCATGTTGCTTCCTATGGATCCAACCATTTCACTGTaGGTTTGTCAAGCACAGCAAATGTTCTCTATTAAAGGGATGACT | + |
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Preference number: 5 (lower is better) Translates to: TIFSMLLPMDPTISL*VCQAQQMFSIKGMT Trigger: AGTCATCCCTTTAATAGAGAACATTTGCTGTGCTTGACAAACTCACAGTGAAATGGTTGGATCCATAGGAAGCAACATGCTGAAAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS GCA 90 bp | TGGTTTCATCAGCTGCCACACTGCCAAATATATGTTCCATATGGATaGTTTGTTATTCCTGAAACATATAACAAATTTCAGCTGCGACTT | + |
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Preference number: 5 (lower is better) Translates to: WFHQLPHCQIYVPYG*FVIPETYNKFQLRL Trigger: AAGTCGCAGCTGAAATTTGTTATATGTTTCAGGAATAACAAAGCATCCATATGGAACATATATTTGGCAGTGTGGCAGCTGATGAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CCA 90 bp | AAAAACAGGATCATATTGAAACCATTTTCAGCATGTTGCTTCCTATaGATCCAACCATTTCACTGTGAGTTTGTCAAGCACAGCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: KNRIILKPFSACCFL*IQPFHCEFVKHSKC Trigger: ACATTTGCTGTGCTTGACAAACTCACAGTGAAATGGTTGGATCCATAGGAAGCAACATGCTGAAAATGGTTTCAATATGATCCTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS GCA 72 bp | CTACGGGTTCCCGATTGTGAAGGTCTTTACCCACGATaGCCAGCTGCTCTGAGAGATCAATGGACACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LRVPDCEGLYPR*PAALRDQWTQV Trigger: CACTTGTGTCCATTGATCTCTCAGAGCAGCTGGGCATCGTGGGTAAAGACCTTCACAATCGGGAACCCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS TCA 72 bp | ATTGTGAAGGTCTTTACCCACGATGCCCAGCTGCTCTaGGAGATCAATGGACACAAGTGGGTCCTGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: IVKVFTHDAQLL*EINGHKWVLQV Trigger: TACCTGCAGGACCCACTTGTGTCCATTGATCTCTCAGAGCAGCTGGGCATCGTGGGTAAAGACCTTCACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CAA 72 bp | ATTATAGAAACAGTGAGGTTGGTCACAGCTCTGCGTTaGCCTTGTTTGAACACTCAGCAGTCTATGAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IIETVRLVTALR*PCLNTQQSMSG Trigger: ACCACTCATAGACTGCTGAGTGTTCAAACAAGGCAAACGCAGAGCTGTGACCAACCTCACTGTTTCTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CAA 72 bp | TTGGATCCTGCTTCTGACATTATAGAAACAGTGAGGTaGGTCACAGCTCTGCGTTTGCCTTGTTTGAACACT | + |
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Preference number: 6 (lower is better) Translates to: LDPASDIIETVR*VTALRLPCLNT Trigger: AGTGTTCAAACAAGGCAAACGCAGAGCTGTGACCAACCTCACTGTTTCTATAATGTCAGAAGCAGGATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS TCA 72 bp | CAAGCCAGCATGTTGCATTGCTCTCTAACTCAGAAGTaGCCCCAAACAAAAGGAATTATCGATGTGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: QASMLHCSLTQK*PQTKGIIDVLS Trigger: AGACAACACATCGATAATTCCTTTTGTTTGGGGTCACTTCTGAGTTAGAGAGCAATGCAACATGCTGGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS GCA 72 bp | ACTGTGTTCTCAACATGGATGCGACTGCCAGTTAATTaGATTCACCTTATAATTCCAGTCTCTCAATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TVFSTWMRLPVN*IHLIIPVSQFG Trigger: ACCAAATTGAGAGACTGGAATTATAAGGTGAATGCAATTAACTGGCAGTCGCATCCATGTTGAGAACACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CCA 72 bp | ATCATATTGAAACCATTTTCAGCATGTTGCTTCCTATaGATCCAACCATTTCACTGTGAGTTTGTCAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: IILKPFSACCFL*IQPFHCEFVKH Trigger: GTGCTTGACAAACTCACAGTGAAATGGTTGGATCCATAGGAAGCAACATGCTGAAAATGGTTTCAATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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| CDS CAA 90 bp | TTCATCAGCTGCCACACTGCCAAATATATGTTCCATATGGATGCTTaGTTATTCCTGAAACATATAACAAATTTCAGCTGCGACTTTATC | + |
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Preference number: 6 (lower is better) Translates to: FISCHTAKYMFHMDA*LFLKHITNFSCDFI Trigger: GATAAAGTCGCAGCTGAAATTTGTTATATGTTTCAGGAATAACAAAGCATCCATATGGAACATATATTTGGCAGTGTGGCAGCTGATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635615.1 |
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