Pregenerated sensors for LINC02455 (Homo sapiens)
Ensembl gene IDs: ENSG00000256672Ensembl transcript IDs: ENST00000541881.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGGCAACATGGCACAATCCTGTCTCGTGGCCAATACATGTAAGTaGAAGTGTTACTTTTGGGTGGAAGATCTAAGAACGATATGCACA | + |
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Preference number: 5 (lower is better) Translates to: LGNMAQSCLVANTCK*KCYFWVEDLRTICT Trigger: TGTGCATATCGTTCTTAGATCTTCCACCCAAAAGTAACACTTCCACTTACATGTATTGGCCACGAGACAGGATTGTGCCATGTTGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541881.1 |
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| CDS GCA 90 bp | TGTAAGTGGAAGTGTTACTTTTGGGTGGAAGATCTAAGAACGATATaGACAATTTACCGAGCTCTTCCCTTTGCTGTAGTGATCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CKWKCYFWVEDLRTI*TIYRALPFAVVIIN Trigger: ATTGATGATCACTACAGCAAAGGGAAGAGCTCGGTAAATTGTGCATATCGTTCTTAGATCTTCCACCCAAAAGTAACACTTCCACTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541881.1 |
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| CDS CCA 72 bp | ATGGCACAATCCTGTCTCGTGGCCAATACATGTAAGTaGAAGTGTTACTTTTGGGTGGAAGATCTAAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: MAQSCLVANTCK*KCYFWVEDLRT Trigger: CGTTCTTAGATCTTCCACCCAAAAGTAACACTTCCACTTACATGTATTGGCCACGAGACAGGATTGTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541881.1 |
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| CDS GCA 72 bp | AAGTGTTACTTTTGGGTGGAAGATCTAAGAACGATATaGACAATTTACCGAGCTCTTCCCTTTGCTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: KCYFWVEDLRTI*TIYRALPFAVV Trigger: CACTACAGCAAAGGGAAGAGCTCGGTAAATTGTGCATATCGTTCTTAGATCTTCCACCCAAAAGTAACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541881.1 |
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| CDS CCA 72 bp | CTCGTGGCCAATACATGTAAGTGGAAGTGTTACTTTTaGGTGGAAGATCTAAGAACGATATGCACAATTTAC | + |
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Preference number: 6 (lower is better) Translates to: LVANTCKWKCYF*VEDLRTICTIY Trigger: GTAAATTGTGCATATCGTTCTTAGATCTTCCACCCAAAAGTAACACTTCCACTTACATGTATTGGCCACGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541881.1 |
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