Pregenerated sensors for LINC02450 (Homo sapiens)
Ensembl gene IDs: ENSG00000257114Ensembl transcript IDs: ENST00000550177.2, ENST00000655248.1, ENST00000655825.1, ENST00000660010.1, ENST00000660815.1, ENST00000662561.1, ENST00000667161.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTGTCTGGGGATGGTGTGTGTGTTGCCTCATCTGCCTTTCTATGTaGTGTCTCCCTGTGCAAAGCTCTGGTGATGGCTCGCTTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AVWGWCVCCLICLSM*CLPVQSSGDGSLAG Trigger: CCCAGCAAGCGAGCCATCACCAGAGCTTTGCACAGGGAGACACCACATAGAAAGGCAGATGAGGCAACACACACACCATCCCCAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 90 bp | GTTACACCCTCAGTTGGAAATGCAGAAATCACCCGCCTTCTGCGTTaGTCTCGCTGGGAGCTGCAGACCGGAGCTGTTCCTATTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VTPSVGNAEITRLLR*SRWELQTGAVPIQP Trigger: TGGCTGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 90 bp | GAAATGCAGAAATCACCCGCCTTCTGCGTTGATCTCGCTGGGAGCTaGAGACCGGAGCTGTTCCTATTCAGCCATCATCTGTGCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: EMQKSPAFCVDLAGS*RPELFLFSHHLCCI Trigger: AATGCAGCACAGATGATGGCTGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 |
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| CDS GCA 90 bp | ACAGTGTTACACCCTCAGTTGGAAATGCAGAAATCACCCGCCTTCTaGGTTGATCTCGCTGGGAGCTGCAGACCGGAGCTGTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: TVLHPQLEMQKSPAF*VDLAGSCRPELFLF Trigger: GAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 90 bp | GGTGTGTGTGTTGCCTCATCTGCCTTTCTATGTGGTGTCTCCCTGTaGAAAGCTCTGGTGATGGCTCGCTTGCTGGGGTTAACGCAATGT | + |
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Preference number: 5 (lower is better) Translates to: GVCVASSAFLCGVSL*KALVMARLLGLTQC Trigger: ACATTGCGTTAACCCCAGCAAGCGAGCCATCACCAGAGCTTTGCACAGGGAGACACCACATAGAAAGGCAGATGAGGCAACACACACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CCA 90 bp | AACAAAAGCAGAGACTTATTGAAAGTGAAAGTACACTCCACAGTGTaGGAGCCGGCAGCGGCAGCAGCTCAAGGGCCTGGATATAGAATC | + |
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Preference number: 5 (lower is better) Translates to: NKSRDLLKVKVHSTV*EPAAAAAQGPGYRI Trigger: GATTCTATATCCAGGCCCTTGAGCTGCTGCCGCTGCCGGCTCCCACACTGTGGAGTGTACTTTCACTTTCAATAAGTCTCTGCTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660010.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 90 bp | ATTAAGTCCCAGAGAGGGGAAGCCGAGAAACATGTCTCCTCTGCTTaGTGGCAGTGTCATGTGCAGGATGTTTTCCTGGCTCCAAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: IKSQRGEAEKHVSSA*WQCHVQDVFLAPKL Trigger: TAACTTTGGAGCCAGGAAAACATCCTGCACATGACACTGCCATCAAGCAGAGGAGACATGTTTCTCGGCTTCCCCTCTCTGGGACTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 90 bp | TCGGTAGAGGGTCTTGACTCCAAGTTGGCCAGGTTCTTGGCATTTTaGACAAAGAATTGGACAAAACACACAGCAAAGCAAGGAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SVEGLDSKLARFLAF*TKNWTKHTAKQGKN Trigger: ATTCTTTCCTTGCTTTGCTGTGTGTTTTGTCCAATTCTTTGTTCAAAATGCCAAGAACCTGGCCAACTTGGAGTCAAGACCCTCTACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000660010.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 90 bp | CTATTCAGCCATCATCTGTGCTGCATTTTAAGGAGATTCCCAGACTaGGAATTTTCTCAAGCAATGCAATCAGAATGTCAGAGACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LFSHHLCCILRRFPD*EFSQAMQSECQRLW Trigger: CCACAGTCTCTGACATTCTGATTGCATTGCTTGAGAAAATTCTCAGTCTGGGAATCTCCTTAAAATGCAGCACAGATGATGGCTGAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 |
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| CDS TCA 90 bp | AGAGTAGGCATAACACTAAAAATCTTCAAGTTCGGTAGAGGGTCTTaGCTCCAAGTTGGCCAGGTTCTTGGCATTTTGAACAAAGAATTG | + |
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Preference number: 5 (lower is better) Translates to: RVGITLKIFKFGRGS*LQVGQVLGILNKEL Trigger: CAATTCTTTGTTCAAAATGCCAAGAACCTGGCCAACTTGGAGTCAAGACCCTCTACCGAACTTGAAGATTTTTAGTGTTATGCCTACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000662561.1 ENST00000667161.1 |
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| CDS CCA 90 bp | ATAAACGAAGAAGTAAATTCTCAGTTCCGCAAATGTTCCAAGAATTaGCAGAGTAGGCATAACACTAAAAATCTTCAAGTTCTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: INEEVNSQFRKCSKN*QSRHNTKNLQVLSS Trigger: AGAGGAGAGAACTTGAAGATTTTTAGTGTTATGCCTACTCTGCCAATTCTTGGAACATTTGCGGAACTGAGAATTTACTTCTTCGTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655825.1 |
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| CDS GCA 72 bp | CACCCTCAGTTGGAAATGCAGAAATCACCCGCCTTCTaGGTTGATCTCGCTGGGAGCTGCAGACCGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HPQLEMQKSPAF*VDLAGSCRPEL Trigger: CAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CAA 72 bp | CTCAGTTGGAAATGCAGAAATCACCCGCCTTCTGCGTaGATCTCGCTGGGAGCTGCAGACCGGAGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSWKCRNHPPSA*ISLGAADRSCS Trigger: GGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 72 bp | TCAGTTGGAAATGCAGAAATCACCCGCCTTCTGCGTTaGTCTCGCTGGGAGCTGCAGACCGGAGCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVGNAEITRLLR*SRWELQTGAVP Trigger: AGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CCA 72 bp | AGAGACTTATTGAAAGTGAAAGTACACTCCACAGTGTaGGAGCCGGCAGCGGCAGCAGCTCAAGGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RDLLKVKVHSTV*EPAAAAAQGPG Trigger: TCCAGGCCCTTGAGCTGCTGCCGCTGCCGGCTCCCACACTGTGGAGTGTACTTTCACTTTCAATAAGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660010.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CAA 90 bp | TGTTACACCCTCAGTTGGAAATGCAGAAATCACCCGCCTTCTGCGTaGATCTCGCTGGGAGCTGCAGACCGGAGCTGTTCCTATTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CYTLSWKCRNHPPSA*ISLGAADRSCSYSA Trigger: GGCTGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 72 bp | CAGAGAGGGGAAGCCGAGAAACATGTCTCCTCTGCTTaGTGGCAGTGTCATGTGCAGGATGTTTTCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QRGEAEKHVSSA*WQCHVQDVFLA Trigger: AGCCAGGAAAACATCCTGCACATGACACTGCCATCAAGCAGAGGAGACATGTTTCTCGGCTTCCCCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 72 bp | GTCCCAGAGAGGGGAAGCCGAGAAACATGTCTCCTCTaGTTGATGGCAGTGTCATGTGCAGGATGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VPERGSRETCLL*LMAVSCAGCFP Trigger: AGGAAAACATCCTGCACATGACACTGCCATCAAGCAGAGGAGACATGTTTCTCGGCTTCCCCTCTCTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 72 bp | ATGGCTGTCTGGGGATGGTGTGTGTGTTGCCTCATCTaGCTTTCTATGTGGTGTCTCCCTGTGCAAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: MAVWGWCVCCLI*LSMWCLPVQSS Trigger: AGAGCTTTGCACAGGGAGACACCACATAGAAAGGCAGATGAGGCAACACACACACCATCCCCAGACAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 72 bp | TGTTTGTTTTTGACCCAGCAGTGGCCACTGCAGCACTaGATCCAGGAGGCTCACCATGCTAGATACTGGATC | + |
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Preference number: 6 (lower is better) Translates to: CLFLTQQWPLQH*IQEAHHARYWI Trigger: GATCCAGTATCTAGCATGGTGAGCCTCCTGGATGCAGTGCTGCAGTGGCCACTGCTGGGTCAAAAACAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS GCA 72 bp | CTTCGTTGGTCACAGTGTTACACCCTCAGTTGGAAATaGAGAAATCACCCGCCTTCTGCGTTGATCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRWSQCYTLSWK*RNHPPSALISL Trigger: CAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAACACTGTGACCAACGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CCA 72 bp | CACTCTCTTCGTTGGTCACAGTGTTACACCCTCAGTTaGAAATGCAGAAATCACCCGCCTTCTGCGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: HSLRWSQCYTLS*KCRNHPPSALI Trigger: GATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAACACTGTGACCAACGAAGAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CAA 72 bp | ACACTCTCTTCGTTGGTCACAGTGTTACACCCTCAGTaGGAAATGCAGAAATCACCCGCCTTCTGCGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: TLSSLVTVLHPQ*EMQKSPAFCVD Trigger: ATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGGTGTAACACTGTGACCAACGAAGAGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS CCA 72 bp | AGTCTGCGAGTCACTGATAGAAAACACTCTCTTCGTTaGTCACAGTGTTACACCCTCAGTTGGAAATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLRVTDRKHSLR*SQCYTLSWKCR Trigger: TCTGCATTTCCAACTGAGGGTGTAACACTGTGACCAACGAAGAGAGTGTTTTCTATCAGTGACTCGCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 72 bp | ATAACACTAAAAATCTTCAAGTTCGGTAGAGGGTCTTaGCTCCAAGTTGGCCAGGTTCTTGGCATTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: ITLKIFKFGRGS*LQVGQVLGILN Trigger: GTTCAAAATGCCAAGAACCTGGCCAACTTGGAGTCAAGACCCTCTACCGAACTTGAAGATTTTTAGTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000662561.1 ENST00000667161.1 |
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| CDS TCA 72 bp | CATCATCTGTGCTGCATTTTAAGGAGATTCCCAGACTaGGAATTTTCTCAAGCAATGCAATCAGAATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HHLCCILRRFPD*EFSQAMQSECQ Trigger: CTGACATTCTGATTGCATTGCTTGAGAAAATTCTCAGTCTGGGAATCTCCTTAAAATGCAGCACAGATGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 |
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| CDS CAA 72 bp | TCAGAATGTCAGAGACTGTGGAAATCATGCCATGTTTaGTTGAATGATCTGAATCTAGAACAAATGAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SECQRLWKSCHV*LNDLNLEQMSR Trigger: CCGACTCATTTGTTCTAGATTCAGATCATTCAACAAAACATGGCATGATTTCCACAGTCTCTGACATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660010.1 |
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| CDS CCA 72 bp | TTTTCTCAAGCAATGCAATCAGAATGTCAGAGACTGTaGAAATCATGCCATGTTTTGTTGAATGATCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: FSQAMQSECQRL*KSCHVLLNDLN Trigger: ATTCAGATCATTCAACAAAACATGGCATGATTTCCACAGTCTCTGACATTCTGATTGCATTGCTTGAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660010.1 ENST00000660815.1 ENST00000662561.1 |
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| CDS CAA 72 bp | TCAGAATGTCAGAGACTGTGGAAATCATGCCATGTTTaGTTGAATGATCTGAATCTAGAACAAATGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SECQRLWKSCHV*LNDLNLEQMSL Trigger: AAGACTCATTTGTTCTAGATTCAGATCATTCAACAAAACATGGCATGATTTCCACAGTCTCTGACATTCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000550177.2 ENST00000655248.1 ENST00000655825.1 ENST00000660815.1 ENST00000662561.1 |
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