Pregenerated sensors for LINC02445 (Homo sapiens)

Ensembl gene IDs: ENSG00000257750

Ensembl transcript IDs: ENST00000551387.1, ENST00000664550.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GACCTAGCTAAGCATGATGCCCAGTTGATGCAAGAGAGAAATAGATaGAATGGGCCTCTGAGAATCTCTCTTGGTGACTTGGCACCTCCA	+
Preference number: 5 (lower is better) Translates to: DLAKHDAQLMQERNR*NGPLRISLGDLAPP Trigger: TGGAGGTGCCAAGTCACCAAGAGAGATTCTCAGAGGCCCATTGCATCTATTTCTCTCTTGCATCAACTGGGCATCATGCTTAGCTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000551387.1 ENST00000664550.1
CDS GCA 90 bp	CTTAGCCTCCTTCATAACTTTCAGGTGAACCTTCATTTGTATTCTTaGCCAAATGTAGATAGACATCACGGCAGACTTGATAATCTTTGG	+
Preference number: 5 (lower is better) Translates to: LSLLHNFQVNLHLYS*PNVDRHHGRLDNLW Trigger: CCAAAGATTATCAAGTCTGCCGTGATGTCTATCTACATTTGGGCAAGAATACAAATGAAGGTTCACCTGAAAGTTATGAAGGAGGCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664550.1
CDS TCA 72 bp	AAAGCCAGAGTAGGCTCAGTGAGACTCCAGTGGAGCTaGGGCAGTAGAATAGGGTCTGCTATTAGAGGTAAT	+
Preference number: 6 (lower is better) Translates to: KARVGSVRLQWS*GSRIGSAIRGN Trigger: ATTACCTCTAATAGCAGACCCTATTCTACTGCCTCAGCTCCACTGGAGTCTCACTGAGCCTACTCTGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551387.1
CDS CCA 72 bp	AATGTAGATAGACATCACGGCAGACTTGATAATCTTTaGGTAGGGGAACCACACCCCACACTCCCTCTTTGC	+
Preference number: 6 (lower is better) Translates to: NVDRHHGRLDNL*VGEPHPTLPLC Trigger: GCAAAGAGGGAGTGTGGGGTGTGGTTCCCCTACCCAAAGATTATCAAGTCTGCCGTGATGTCTATCTACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664550.1
CDS GCA 72 bp	AAGCATGATGCCCAGTTGATGCAAGAGAGAAATAGATaGAATGGGCCTCTGAGAATCTCTCTTGGTGACTTG	+
Preference number: 6 (lower is better) Translates to: KHDAQLMQERNR*NGPLRISLGDL Trigger: CAAGTCACCAAGAGAGATTCTCAGAGGCCCATTGCATCTATTTCTCTCTTGCATCAACTGGGCATCATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000551387.1 ENST00000664550.1
CDS CAA 72 bp	GATAAGAACTCAGACCTAGCTAAGCATGATGCCCAGTaGATGCAAGAGAGAAATAGATGCAATGGGCCTCTG	+
Preference number: 6 (lower is better) Translates to: DKNSDLAKHDAQ*MQERNRCNGPL Trigger: CAGAGGCCCATTGCATCTATTTCTCTCTTGCATCAACTGGGCATCATGCTTAGCTAGGTCTGAGTTCTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000551387.1 ENST00000664550.1
CDS TCA 72 bp	AAAGCCAGAGTAGGCTCAGTGAGACTCCAGTGGAGCTaGGGCAGTAGAATAGGGTATATAAAATTTACTTGT	+
Preference number: 6 (lower is better) Translates to: KARVGSVRLQWS*GSRIGYIKFTC Trigger: ACAAGTAAATTTTATATACCCTATTCTACTGCCTCAGCTCCACTGGAGTCTCACTGAGCCTACTCTGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664550.1
CDS CAA 72 bp	CTTAGCCTCCTTCATAACTTTCAGGTGAACCTTCATTaGTATTCTTGCCCAAATGTAGATAGACATCACGGC	+
Preference number: 6 (lower is better) Translates to: LSLLHNFQVNLH*YSCPNVDRHHG Trigger: GCCGTGATGTCTATCTACATTTGGGCAAGAATACAAATGAAGGTTCACCTGAAAGTTATGAAGGAGGCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664550.1

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