Pregenerated sensors for LINC02444 (Homo sapiens)

Ensembl gene IDs: ENSG00000258123

Ensembl transcript IDs: ENST00000550723.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGCAATCATCAGGCCGCCAATGAAGCAGAGAACACACTTCAGCATTaGGTGGATCCGGCATATTCAGAGCAGACAGTTTTCTTTGTGGTG	+
Preference number: 5 (lower is better) Translates to: CNHQAANEAENTLQH*VDPAYSEQTVFFVV Trigger: CACCACAAAGAAAACTGTCTGCTCTGAATATGCCGGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGGCCTGATGATTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS TCA 90 bp	ATCAGAAGACTGGTTATGAGAGTGCTGCAATCATCAGGCCGCCAATaGAGCAGAGAACACACTTCAGCATTGAGTGGATCCGGCATATTC	+
Preference number: 5 (lower is better) Translates to: IRRLVMRVLQSSGRQ*SREHTSALSGSGIF Trigger: GAATATGCCGGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGGCCTGATGATTGCAGCACTCTCATAACCAGTCTTCTGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS CCA 90 bp	ATCATCAGGCCGCCAATGAAGCAGAGAACACACTTCAGCATTGAGTaGATCCGGCATATTCAGAGCAGACAGTTTTCTTTGTGGTGTGAG	+
Preference number: 5 (lower is better) Translates to: IIRPPMKQRTHFSIE*IRHIQSRQFSLWCE Trigger: CTCACACCACAAAGAAAACTGTCTGCTCTGAATATGCCGGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGGCCTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS TCA 90 bp	TGTTTCAGAATGTTTCCTGATGGTAAGGTGATGAGAGATGAGAGTTaGGAGCTTGGGTATCAGAAGACTGGTTATGAGAGTGCTGCAATC	+
Preference number: 5 (lower is better) Translates to: CFRMFPDGKVMRDES*ELGYQKTGYESAAI Trigger: GATTGCAGCACTCTCATAACCAGTCTTCTGATACCCAAGCTCTCAACTCTCATCTCTCATCACCTTACCATCAGGAAACATTCTGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS TCA 72 bp	CAGGCCGCCAATGAAGCAGAGAACACACTTCAGCATTaGGTGGATCCGGCATATTCAGAGCAGACAGTTTTC	+
Preference number: 6 (lower is better) Translates to: QAANEAENTLQH*VDPAYSEQTVF Trigger: GAAAACTGTCTGCTCTGAATATGCCGGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS TCA 72 bp	CTGGTTATGAGAGTGCTGCAATCATCAGGCCGCCAATaGAGCAGAGAACACACTTCAGCATTGAGTGGATCC	+
Preference number: 6 (lower is better) Translates to: LVMRVLQSSGRQ*SREHTSALSGS Trigger: GGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGGCCTGATGATTGCAGCACTCTCATAACCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550723.1
CDS CCA 72 bp	CCGCCAATGAAGCAGAGAACACACTTCAGCATTGAGTaGATCCGGCATATTCAGAGCAGACAGTTTTCTTTG	+
Preference number: 6 (lower is better) Translates to: PPMKQRTHFSIE*IRHIQSRQFSL Trigger: CAAAGAAAACTGTCTGCTCTGAATATGCCGGATCCACTCAATGCTGAAGTGTGTTCTCTGCTTCATTGGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550723.1

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