Pregenerated sensors for LINC02441 (Homo sapiens)

Ensembl gene IDs: ENSG00000256643

Ensembl transcript IDs: ENST00000543651.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCAAAGACAGTGTGGGGTAAGGGCCGGTGGTTGCTAGGCAATGAGTaGTTGCTGCTGATGGGTTGGGGCAGAGATGAAGTCATAGGAGAT	+
Preference number: 5 (lower is better) Translates to: SKTVWGKGRWLLGNE*LLLMGWGRDEVIGD Trigger: ATCTCCTATGACTTCATCTCTGCCCCAACCCATCAGCAGCAAGCACTCATTGCCTAGCAACCACCGGCCCTTACCCCACACTGTCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543651.1
CDS TCA 90 bp	AGCTGTCCTCTTGCATTGAATCACTTCTGGGTGGGGTCACGGGAGTaGGATTGGTCTGTATTCTCCTCTTCAGTGATTCTTCCATCCCCT	+
Preference number: 5 (lower is better) Translates to: SCPLALNHFWVGSRE*DWSVFSSSVILPSP Trigger: AGGGGATGGAAGAATCACTGAAGAGGAGAATACAGACCAATCTCACTCCCGTGACCCCACCCAGAAGTGATTCAATGCAAGAGGACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543651.1
CDS CAA 72 bp	TGGGGTAAGGGCCGGTGGTTGCTAGGCAATGAGTGCTaGCTGCTGATGGGTTGGGGCAGAGATGAAGTCATA	+
Preference number: 6 (lower is better) Translates to: WGKGRWLLGNEC*LLMGWGRDEVI Trigger: TATGACTTCATCTCTGCCCCAACCCATCAGCAGCAAGCACTCATTGCCTAGCAACCACCGGCCCTTACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543651.1
CDS CCA 72 bp	CCAAGGCTCATAAGCAGGAGCTTTTCAAAGACAGTGTaGGGTAAGGGCCGGTGGTTGCTAGGCAATGAGTGC	+
Preference number: 6 (lower is better) Translates to: PRLISRSFSKTV*GKGRWLLGNEC Trigger: GCACTCATTGCCTAGCAACCACCGGCCCTTACCCCACACTGTCTTTGAAAAGCTCCTGCTTATGAGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543651.1
CDS CAA 90 bp	TCCTCTTGCATTGAATCACTTCTGGGTGGGGTCACGGGAGTGAGATaGGTCTGTATTCTCCTCTTCAGTGATTCTTCCATCCCCTTCTCC	+
Preference number: 6 (lower is better) Translates to: SSCIESLLGGVTGVR*VCILLFSDSSIPFS Trigger: GGAGAAGGGGATGGAAGAATCACTGAAGAGGAGAATACAGACCAATCTCACTCCCGTGACCCCACCCAGAAGTGATTCAATGCAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543651.1
CDS TCA 72 bp	CTTGCATTGAATCACTTCTGGGTGGGGTCACGGGAGTaGGATTGGTCTGTATTCTCCTCTTCAGTGATTCTT	+
Preference number: 6 (lower is better) Translates to: LALNHFWVGSRE*DWSVFSSSVIL Trigger: AAGAATCACTGAAGAGGAGAATACAGACCAATCTCACTCCCGTGACCCCACCCAGAAGTGATTCAATGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543651.1

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