Pregenerated sensors for LINC02437 (Homo sapiens)
Ensembl gene IDs: ENSG00000248517Ensembl transcript IDs: ENST00000505053.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCTGCTGGGTCGCACAGGGCTGCCCCCTCCACTGGCGTGTGAGTaGTCTGAGCCTGGGGCCTTGGCTTGGTCATGGTACCCTCGCACC | + |
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Preference number: 5 (lower is better) Translates to: ALLGRTGLPPPLACE*SEPGALAWSWYPRT Trigger: GGTGCGAGGGTACCATGACCAAGCCAAGGCCCCAGGCTCAGAGCACTCACACGCCAGTGGAGGGGGCAGCCCTGTGCGACCCAGCAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 90 bp | CGGGATCCTTCAGCCCCCAGCATCTGCGGGCTGGCAGGTTCTGCCTaGAGGAGTAGAGCCGGGCTCCGTGGAGCAGGATCTCTCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: RDPSAPSICGLAGSA*RSRAGLRGAGSLGS Trigger: ACTTCCGAGAGATCCTGCTCCACGGAGCCCGGCTCTACTCCTGCAGGCAGAACCTGCCAGCCCGCAGATGCTGGGGGCTGAAGGATCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 90 bp | GTGGCGCGCTGTTCTCGAGGAGCAAACGCGCTGGATTCTGACGCCTaGCCTGACGCTTGGTGTCGCCGGGATCCTTCAGCCCCCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: VARCSRGANALDSDA*PDAWCRRDPSAPSI Trigger: GATGCTGGGGGCTGAAGGATCCCGGCGACACCAAGCGTCAGGTCAGGCGTCAGAATCCAGCGCGTTTGCTCCTCGAGAACAGCGCGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 90 bp | CAGAGAGGCTCTTCTGGGATGAGTGTGGTCACGGCGGGGCCTTTCTaGTTCACTCCATCCCTCCCGTGTCCTGCAGCTGACGGGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: QRGSSGMSVVTAGPF*FTPSLPCPAADGTP Trigger: GGGGGTCCCGTCAGCTGCAGGACACGGGAGGGATGGAGTGAAGCAGAAAGGCCCCGCCGTGACCACACTCATCCCAGAAGAGCCTCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 90 bp | GAAGTGGAGCTCGGCACTGCAGCCCCTCACACACTTGGGAGCAGGTaGCGCGCTGTTCTCGAGGAGCAAACGCGCTGGATTCTGACGCCT | + |
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Preference number: 5 (lower is better) Translates to: EVELGTAAPHTLGSR*RAVLEEQTRWILTP Trigger: AGGCGTCAGAATCCAGCGCGTTTGCTCCTCGAGAACAGCGCGCCACCTGCTCCCAAGTGTGTGAGGGGCTGCAGTGCCGAGCTCCACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 90 bp | ACACTTGGGAGCAGGTGGCGCGCTGTTCTCGAGGAGCAAACGCGCTaGATTCTGACGCCTGACCTGACGCTTGGTGTCGCCGGGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: TLGSRWRAVLEEQTR*ILTPDLTLGVAGIL Trigger: AAGGATCCCGGCGACACCAAGCGTCAGGTCAGGCGTCAGAATCCAGCGCGTTTGCTCCTCGAGAACAGCGCGCCACCTGCTCCCAAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 90 bp | GCTCCGTGGAGCAGGATCTCTCGGAAGTGCAGGCTGCAGGAGTTCTaGTCTCCTCTAAGGGCCTTTGTTCCTGGTCAGCCTTCCCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: APWSRISRKCRLQEF*SPLRAFVPGQPSPG Trigger: ACCAGGGGAAGGCTGACCAGGAACAAAGGCCCTTAGAGGAGAGCAGAACTCCTGCAGCCTGCACTTCCGAGAGATCCTGCTCCACGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 90 bp | CTGCTCTCCTCTAAGGGCCTTTGTTCCTGGTCAGCCTTCCCCTGGTaGGAGTTGGCACAGTTAGTGGAAAGGGCACAGGCTGCCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLSSKGLCSWSAFPW*ELAQLVERAQAASS Trigger: GCTCGAGGCAGCCTGTGCCCTTTCCACTAACTGTGCCAACTCTCACCAGGGGAAGGCTGACCAGGAACAAAGGCCCTTAGAGGAGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 90 bp | AGAGTTGGCACAGTTAGTGGAAAGGGCACAGGCTGCCTCGAGCCCTaGGGGCTGGTGCTGACTTTCCACTGGTGCAGTCTGACCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: RVGTVSGKGTGCLEP*GLVLTFHWCSLTLK Trigger: TTTCAAGGTCAGACTGCACCAGTGGAAAGTCAGCACCAGCCCCCAGGGCTCGAGGCAGCCTGTGCCCTTTCCACTAACTGTGCCAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 90 bp | GGGGCCTTGGCTTGGTCATGGTACCCTCGCACCTGGCACAGTGCCTaGCATGGAGGGAGTGCTAATACATGTTTGTTGAAAGGTAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GALAWSWYPRTWHSA*HGGSANTCLLKGRS Trigger: CGACCTACCTTTCAACAAACATGTATTAGCACTCCCTCCATGCCAGGCACTGTGCCAGGTGCGAGGGTACCATGACCAAGCCAAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 90 bp | TTCCTTGTGATTTCCTTTCATGCCAACAGAGAGGCTCTTCTGGGATaGGTGTGGTCACGGCGGGGCCTTTCTGCTTCACTCCATCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FLVISFHANREALLG*VWSRRGLSASLHPS Trigger: GGAGGGATGGAGTGAAGCAGAAAGGCCCCGCCGTGACCACACTCATCCCAGAAGAGCCTCTCTGTTGGCATGAAAGGAAATCACAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 90 bp | CTTTTGTTGGTTGAAGACAGGGTATGGGTGACATTTGATTCAGATTaGGTCAGAATTCGGCGCTGTGATGTCGTGCGCAGCTCCGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLLVEDRVWVTFDSD*VRIRRCDVVRSSGL Trigger: GAGACCGGAGCTGCGCACGACATCACAGCGCCGAATTCTGACCCAATCTGAATCAAATGTCACCCATACCCTGTCTTCAACCAACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 72 bp | GTGCCCTGCTGGGTCGCACAGGGCTGCCCCCTCCACTaGCGTGTGAGTGCTCTGAGCCTGGGGCCTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VPCWVAQGCPLH*RVSALSLGPWL Trigger: AAGCCAAGGCCCCAGGCTCAGAGCACTCACACGCCAGTGGAGGGGGCAGCCCTGTGCGACCCAGCAGGGCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 72 bp | TCAGCCCCCAGCATCTGCGGGCTGGCAGGTTCTGCCTaGAGGAGTAGAGCCGGGCTCCGTGGAGCAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SAPSICGLAGSA*RSRAGLRGAGS Trigger: AGATCCTGCTCCACGGAGCCCGGCTCTACTCCTGCAGGCAGAACCTGCCAGCCCGCAGATGCTGGGGGCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 72 bp | GGTCGCACAGGGCTGCCCCCTCCACTGGCGTGTGAGTaGTCTGAGCCTGGGGCCTTGGCTTGGTCATGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GRTGLPPPLACE*SEPGALAWSWY Trigger: GTACCATGACCAAGCCAAGGCCCCAGGCTCAGAGCACTCACACGCCAGTGGAGGGGGCAGCCCTGTGCGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 72 bp | CGGCGCTGTGATGTCGTGCGCAGCTCCGGTCTCCTGTaGCTTCCCAACGCAGGGGCTGGAGAGGAGGGCATA | + |
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Preference number: 6 (lower is better) Translates to: RRCDVVRSSGLL*LPNAGAGEEGI Trigger: TATGCCCTCCTCTCCAGCCCCTGCGTTGGGAAGTCACAGGAGACCGGAGCTGCGCACGACATCACAGCGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 72 bp | AGCAGGTGGCGCGCTGTTCTCGAGGAGCAAACGCGCTaGATTCTGACGCCTGACCTGACGCTTGGTGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: SRWRAVLEEQTR*ILTPDLTLGVA Trigger: GGCGACACCAAGCGTCAGGTCAGGCGTCAGAATCCAGCGCGTTTGCTCCTCGAGAACAGCGCGCCACCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 72 bp | CTCCACTGGCGTGTGAGTGCTCTGAGCCTGGGGCCTTaGCTTGGTCATGGTACCCTCGCACCTGGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: LHWRVSALSLGP*LGHGTLAPGTV Trigger: CACTGTGCCAGGTGCGAGGGTACCATGACCAAGCCAAGGCCCCAGGCTCAGAGCACTCACACGCCAGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 72 bp | TCAGGAGGTGGCGGGGCAGGAGTGAGTCTTGTGAAGTaGAGCTCGGCACTGCAGCCCCTCACACACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SGGGGAGVSLVK*SSALQPLTHLG Trigger: TCCCAAGTGTGTGAGGGGCTGCAGTGCCGAGCTCCACTTCACAAGACTCACTCCTGCCCCGCCACCTCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 72 bp | TCTTCTGGGATGAGTGTGGTCACGGCGGGGCCTTTCTaGTTCACTCCATCCCTCCCGTGTCCTGCAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SSGMSVVTAGPF*FTPSLPCPAAD Trigger: GTCAGCTGCAGGACACGGGAGGGATGGAGTGAAGCAGAAAGGCCCCGCCGTGACCACACTCATCCCAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS GCA 72 bp | ATTCAGATTGGGTCAGAATTCGGCGCTGTGATGTCGTaGGCAGCTCCGGTCTCCTGTGACTTCCCAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: IQIGSEFGAVMS*AAPVSCDFPTQ Trigger: CTGCGTTGGGAAGTCACAGGAGACCGGAGCTGCGCACGACATCACAGCGCCGAATTCTGACCCAATCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 72 bp | TCTAAGGGCCTTTGTTCCTGGTCAGCCTTCCCCTGGTaGGAGTTGGCACAGTTAGTGGAAAGGGCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SKGLCSWSAFPW*ELAQLVERAQA Trigger: AGCCTGTGCCCTTTCCACTAACTGTGCCAACTCTCACCAGGGGAAGGCTGACCAGGAACAAAGGCCCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CAA 72 bp | AGTGCTAATACATGTTTGTTGAAAGGTAGGTCGGGCTaGACTGCGTCTGCTCAGGAGGTGGCGGGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SANTCLLKGRSG*TASAQEVAGQE Trigger: CTCCTGCCCCGCCACCTCCTGAGCAGACGCAGTCAAGCCCGACCTACCTTTCAACAAACATGTATTAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 72 bp | ATTTCCTTTCATGCCAACAGAGAGGCTCTTCTGGGATaGGTGTGGTCACGGCGGGGCCTTTCTGCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: ISFHANREALLG*VWSRRGLSASL Trigger: GAGTGAAGCAGAAAGGCCCCGCCGTGACCACACTCATCCCAGAAGAGCCTCTCTGTTGGCATGAAAGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CCA 72 bp | GTTGAAGACAGGGTATGGGTGACATTTGATTCAGATTaGGTCAGAATTCGGCGCTGTGATGTCGTGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VEDRVWVTFDSD*VRIRRCDVVRS Trigger: GCTGCGCACGACATCACAGCGCCGAATTCTGACCCAATCTGAATCAAATGTCACCCATACCCTGTCTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS TCA 72 bp | CTGGTGCAGTCTGACCTTGAAAAGTCCCTTTCCTTGTaGTTTCCTTTCATGCCAACAGAGAGGCTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LVQSDLEKSLSL*FPFMPTERLFW Trigger: CCAGAAGAGCCTCTCTGTTGGCATGAAAGGAAATCACAAGGAAAGGGACTTTTCAAGGTCAGACTGCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CAA 90 bp | GCCAAGGCAGCTGAAGATGATGTCTCTGGCTTCGTTGCTCTTTTGTaGGTTGAAGACAGGGTATGGGTGACATTTGATTCAGATTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AKAAEDDVSGFVALL*VEDRVWVTFDSDWV Trigger: GACCCAATCTGAATCAAATGTCACCCATACCCTGTCTTCAACCAACAAAAGAGCAACGAAGCCAGAGACATCATCTTCAGCTGCCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CAA 90 bp | CAGGCCAAGGCAGCTGAAGATGATGTCTCTGGCTTCGTTGCTCTTTaGTTGGTTGAAGACAGGGTATGGGTGACATTTGATTCAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: QAKAAEDDVSGFVAL*LVEDRVWVTFDSDW Trigger: CCAATCTGAATCAAATGTCACCCATACCCTGTCTTCAACCAACAAAAGAGCAACGAAGCCAGAGACATCATCTTCAGCTGCCTTGGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CAA 72 bp | GCAGCTGAAGATGATGTCTCTGGCTTCGTTGCTCTTTaGTTGGTTGAAGACAGGGTATGGGTGACATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: AAEDDVSGFVAL*LVEDRVWVTFD Trigger: ATCAAATGTCACCCATACCCTGTCTTCAACCAACAAAAGAGCAACGAAGCCAGAGACATCATCTTCAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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| CDS CAA 72 bp | GCTGAAGATGATGTCTCTGGCTTCGTTGCTCTTTTGTaGGTTGAAGACAGGGTATGGGTGACATTTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: AEDDVSGFVALL*VEDRVWVTFDS Trigger: TGAATCAAATGTCACCCATACCCTGTCTTCAACCAACAAAAGAGCAACGAAGCCAGAGACATCATCTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505053.1 |
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