Pregenerated sensors for LINC02435 (Homo sapiens)
Ensembl gene IDs: ENSG00000251526Ensembl transcript IDs: ENST00000508291.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACACAGAGCGAGCCTCCTCAGCCCACTGCCTCTTTAAGGCTGCCATaGTCTTCGAGTGTTCCCTTCTCCTTCCCACTCACCAGAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TQSEPPQPTASLRLP*SSSVPFSFPLTRAP Trigger: AGGAGCTCTGGTGAGTGGGAAGGAGAAGGGAACACTCGAAGAGCATGGCAGCCTTAAAGAGGCAGTGGGCTGAGGAGGCTCGCTCTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS GCA 90 bp | ACTCACCAGAGCTCCTCAGGAACAGACAGGGAGTCTCACCCACCTTaGATCCCTGAGACCCACCACACCCACTGGCACGCCATAAAATGT | + |
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Preference number: 5 (lower is better) Translates to: THQSSSGTDRESHPP*IPETHHTHWHAIKC Trigger: ACATTTTATGGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTGAGACTCCCTGTCTGTTCCTGAGGAGCTCTGGTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS TCA 90 bp | GAGCTCCTCAGGAACAGACAGGGAGTCTCACCCACCTTGCATCCCTaGGACCCACCACACCCACTGGCACGCCATAAAATGTATTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: ELLRNRQGVSPTLHP*DPPHPLARHKMYFR Trigger: ACGGAAATACATTTTATGGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTGAGACTCCCTGTCTGTTCCTGAGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS GCA 90 bp | ACCCTGTTCCAATTTCTGAACACAGAGCGAGCCTCCTCAGCCCACTaGCTCTTTAAGGCTGCCATGCTCTTCGAGTGTTCCCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TLFQFLNTERASSAH*LFKAAMLFECSLLL Trigger: AAGGAGAAGGGAACACTCGAAGAGCATGGCAGCCTTAAAGAGGCAGTGGGCTGAGGAGGCTCGCTCTGTGTTCAGAAATTGGAACAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS CCA 90 bp | AGGGAGTCTCACCCACCTTGCATCCCTGAGACCCACCACACCCACTaGCACGCCATAAAATGTATTTCCGTGTCTATGCTGTCCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RESHPPCIPETHHTH*HAIKCISVSMLSFN Trigger: ATTGAAGGACAGCATAGACACGGAAATACATTTTATGGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTGAGACTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS TCA 90 bp | TTTAACAGCCACACAGCATCCTTTCTACAACCCTGTTCCAATTTCTaGACACAGAGCGAGCCTCCTCAGCCCACTGCCTCTTTAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FNSHTASFLQPCSNF*TQSEPPQPTASLRL Trigger: CAGCCTTAAAGAGGCAGTGGGCTGAGGAGGCTCGCTCTGTGTTCAGAAATTGGAACAGGGTTGTAGAAAGGATGCTGTGTGGCTGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS TCA 90 bp | TGGAAATGTCATTCACCTCAAAGCATCTGCTCCATGGTTACATCGTaGATCCTAGACTGGCTCAAAGGCCAAAAGTTGGTAATAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: WKCHSPQSICSMVTS*ILDWLKGQKLVIIQ Trigger: TTGGATTATTACCAACTTTTGGCCTTTGAGCCAGTCTAGGATTCACGATGTAACCATGGAGCAGATGCTTTGAGGTGAATGACATTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS GCA 72 bp | AGCTCCTCAGGAACAGACAGGGAGTCTCACCCACCTTaGATCCCTGAGACCCACCACACCCACTGGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSGTDRESHPP*IPETHHTHWHA Trigger: GGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTGAGACTCCCTGTCTGTTCCTGAGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS GCA 72 bp | GAGCCTCCTCAGCCCACTGCCTCTTTAAGGCTGCCATaGTCTTCGAGTGTTCCCTTCTCCTTCCCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: EPPQPTASLRLP*SSSVPFSFPLT Trigger: GGTGAGTGGGAAGGAGAAGGGAACACTCGAAGAGCATGGCAGCCTTAAAGAGGCAGTGGGCTGAGGAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS TCA 72 bp | AGGAACAGACAGGGAGTCTCACCCACCTTGCATCCCTaGGACCCACCACACCCACTGGCACGCCATAAAATG | + |
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Preference number: 6 (lower is better) Translates to: RNRQGVSPTLHP*DPPHPLARHKM Trigger: CATTTTATGGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTGAGACTCCCTGTCTGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS CCA 72 bp | CACCCACCTTGCATCCCTGAGACCCACCACACCCACTaGCACGCCATAAAATGTATTTCCGTGTCTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: HPPCIPETHHTH*HAIKCISVSML Trigger: CAGCATAGACACGGAAATACATTTTATGGCGTGCCAGTGGGTGTGGTGGGTCTCAGGGATGCAAGGTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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| CDS TCA 72 bp | CATTCACCTCAAAGCATCTGCTCCATGGTTACATCGTaGATCCTAGACTGGCTCAAAGGCCAAAAGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: HSPQSICSMVTS*ILDWLKGQKLV Trigger: TACCAACTTTTGGCCTTTGAGCCAGTCTAGGATTCACGATGTAACCATGGAGCAGATGCTTTGAGGTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508291.1 |
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