Pregenerated sensors for LINC02434 (Homo sapiens)
Ensembl gene IDs: ENSG00000248370Ensembl transcript IDs: ENST00000502419.1, ENST00000658544.1, ENST00000658558.1, ENST00000660215.1, ENST00000660255.1, ENST00000661756.1, ENST00000662356.1, ENST00000663042.1, ENST00000663842.1, ENST00000666556.1, ENST00000667086.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GACTCTCCGATTCGTCTCAGGAGGGTCTCCTGGCTGCCTCTGCAGTaGGATCGCATCACCAAGCAGCAATCTGGTCCCTCCTGTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DSPIRLRRVSWLPLQ*DRITKQQSGPSCLQ Trigger: CTGAAGACAGGAGGGACCAGATTGCTGCTTGGTGATGCGATCTCACTGCAGAGGCAGCCAGGAGACCCTCCTGAGACGAATCGGAGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000502419.1 ENST00000658544.1 ENST00000658558.1 ENST00000660215.1 ENST00000660255.1 ENST00000661756.1 ENST00000662356.1 ENST00000663042.1 ENST00000663842.1 ENST00000666556.1 ENST00000667086.1 |
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| CDS CCA 90 bp | CTGAGAAGCGAGACAACTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTCCCAGATACT | + |
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Preference number: 5 (lower is better) Translates to: LRSETTRGESPLQST*AFIPICKRAGLPDT Trigger: AGTATCTGGGAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGTTGTCTCGCTTCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660255.1 ENST00000663042.1 |
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| CDS CCA 90 bp | ACAGAACCAGTGTTTCCTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTCCCAGATACT | + |
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Preference number: 5 (lower is better) Translates to: TEPVFPRGESPLQST*AFIPICKRAGLPDT Trigger: AGTATCTGGGAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGGAAACACTGGTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663842.1 |
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| CDS CCA 90 bp | TCTGTGATGACGCGTGGGCCCCACCAAAATAGAACCGAACAGAACTaGTGGAGAAAGAATTTGTTTGAAATTTGTGGATCCACCATCACT | + |
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Preference number: 5 (lower is better) Translates to: SVMTRGPHQNRTEQN*WRKNLFEICGSTIT Trigger: AGTGATGGTGGATCCACAAATTTCAAACAAATTCTTTCTCCACCAGTTCTGTTCGGTTCTATTTTGGTGGGGCCCACGCGTCATCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667086.1 |
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| CDS TCA 90 bp | GGTGGAGAAAGAATTTGTTTGAAATTTGTGGATCCACCATCACTGTaGAAAACACACCCCAGAAAGCAAATCACCACTCTAGACACTGAC | + |
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Preference number: 5 (lower is better) Translates to: GGERICLKFVDPPSL*KTHPRKQITTLDTD Trigger: GTCAGTGTCTAGAGTGGTGATTTGCTTTCTGGGGTGTGTTTTTCACAGTGATGGTGGATCCACAAATTTCAAACAAATTCTTTCTCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667086.1 |
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| CDS CCA 72 bp | CCCTCACCTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPRGESPLQST*AFIPICKRAGL Trigger: GAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGGTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660215.1 ENST00000662356.1 |
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| CDS TCA 72 bp | ATTCGTCTCAGGAGGGTCTCCTGGCTGCCTCTGCAGTaGGATCGCATCACCAAGCAGCAATCTGGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: IRLRRVSWLPLQ*DRITKQQSGPS Trigger: GGAGGGACCAGATTGCTGCTTGGTGATGCGATCTCACTGCAGAGGCAGCCAGGAGACCCTCCTGAGACGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000502419.1 ENST00000658544.1 ENST00000658558.1 ENST00000660215.1 ENST00000660255.1 ENST00000661756.1 ENST00000662356.1 ENST00000663042.1 ENST00000663842.1 ENST00000666556.1 ENST00000667086.1 |
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| CDS CCA 72 bp | GAGACAACTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ETTRGESPLQST*AFIPICKRAGL Trigger: GAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660255.1 ENST00000663042.1 |
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| CDS CCA 72 bp | GTGTTTCCTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VFPRGESPLQST*AFIPICKRAGL Trigger: GAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGGAAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663842.1 |
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| CDS CCA 72 bp | TTCCTTTCTAGAGGAGAGTCACCTCTCCAGAGCACCTaGGCCTTCATTCCCATCTGCAAGAGGGCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSRGESPLQST*AFIPICKRAGL Trigger: GAGCCCTGCCCTCTTGCAGATGGGAATGAAGGCCCAGGTGCTCTGGAGAGGTGACTCTCCTCTAGAAAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658544.1 ENST00000658558.1 ENST00000667086.1 |
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| CDS CCA 72 bp | AGTTATAAAAGAACTAGGATGTGTGTAAAAGCAGCATaGACTCTCCGATTCGTCTCAGGAGGGTCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SYKRTRMCVKAA*TLRFVSGGSPG Trigger: GCCAGGAGACCCTCCTGAGACGAATCGGAGAGTCCATGCTGCTTTTACACACATCCTAGTTCTTTTATAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000502419.1 ENST00000658544.1 ENST00000658558.1 ENST00000660215.1 ENST00000660255.1 ENST00000661756.1 ENST00000662356.1 ENST00000663042.1 ENST00000663842.1 ENST00000666556.1 ENST00000667086.1 |
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| CDS TCA 72 bp | TTCTCAAACAGGTTTACAGAACCAGTGTTTCCTTTCTaGGAAGCGAGACAACATTTAGACCGGAAGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FSNRFTEPVFPF*EARQHLDRKEV Trigger: CACCTCCTTCCGGTCTAAATGTTGTCTCGCTTCTCAGAAAGGAAACACTGGTTCTGTAAACCTGTTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502419.1 |
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| CDS TCA 72 bp | AGAATTTGTTTGAAATTTGTGGATCCACCATCACTGTaGAAAACACACCCCAGAAAGCAAATCACCACTCTA | + |
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Preference number: 6 (lower is better) Translates to: RICLKFVDPPSL*KTHPRKQITTL Trigger: TAGAGTGGTGATTTGCTTTCTGGGGTGTGTTTTTCACAGTGATGGTGGATCCACAAATTTCAAACAAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667086.1 |
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| CDS CAA 72 bp | CAAAATAGAACCGAACAGAACTGGTGGAGAAAGAATTaGTTTGAAATTTGTGGATCCACCATCACTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: QNRTEQNWWRKN*FEICGSTITVK Trigger: TTTCACAGTGATGGTGGATCCACAAATTTCAAACAAATTCTTTCTCCACCAGTTCTGTTCGGTTCTATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667086.1 |
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