Pregenerated sensors for LINC02431 (Homo sapiens)
Ensembl gene IDs: ENSG00000248872Ensembl transcript IDs: ENST00000503929.1, ENST00000505329.2, ENST00000654933.1, ENST00000661044.1, ENST00000661066.1, ENST00000663587.1, ENST00000666580.1, ENST00000668913.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 72 bp | ACCGGTCTTGGGTATCACGTCAGGACCAGGCTGTGGTaGCCTTGTGTGCTGGCCATGGGAGAGTGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGLGYHVRTRLW*PCVLAMGEWLG Trigger: CCCCAGCCACTCTCCCATGGCCAGCACACAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000654933.1 ENST00000661044.1 ENST00000661066.1 ENST00000663587.1 ENST00000666580.1 ENST00000668913.1 |
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| CDS CCA 72 bp | CCCACCGGTCTTGGGTATCACGTCAGGACCAGGCTGTaGTGGCCTTGTGTGCTGGCCATGGGAGAGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PTGLGYHVRTRL*WPCVLAMGEWL Trigger: CAGCCACTCTCCCATGGCCAGCACACAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000654933.1 ENST00000661044.1 ENST00000661066.1 ENST00000663587.1 ENST00000666580.1 ENST00000668913.1 |
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| CDS CAA 90 bp | GTGCTGGCCATGGGAGAGTGGCTGGGGCTGAGAGCCAACGTGCCCTaGACATGGTCACTGAGTGGCAGCTCCTACCCTCCAGGAATTGTG | + |
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Preference number: 6 (lower is better) Translates to: VLAMGEWLGLRANVP*TWSLSGSSYPPGIV Trigger: CACAATTCCTGGAGGGTAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTCTCCCATGGCCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000505329.2 |
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| CDS CCA 72 bp | AGCAGTGAAGCAGATGCCCCTCGTACCCACCGGTCTTaGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSEADAPRTHRS*VSRQDQAVVAL Trigger: CAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGCTTCACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 ENST00000666580.1 ENST00000668913.1 |
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| CDS CAA 90 bp | CCAGTGTCTCCAGTTGTATCCAGATGCCCCTCGTACCCACCGGTCTaGGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTGTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PVSPVVSRCPSYPPV*GITSGPGCGGLVCW Trigger: CCAGCACACAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGATACAACTGGAGACACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654933.1 |
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| CDS CCA 72 bp | GAGTGGCTGGGGCTGAGAGCCAACGTGCCCTTGACATaGTCACTGAGTGGCAGCTCCTACCCTCCAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: EWLGLRANVPLT*SLSGSSYPPGI Trigger: AATTCCTGGAGGGTAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000505329.2 |
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| CDS CCA 72 bp | CAGTTGTATCCAGATGCCCCTCGTACCCACCGGTCTTaGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QLYPDAPRTHRS*VSRQDQAVVAL Trigger: CAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGATACAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654933.1 |
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| CDS CAA 72 bp | CCAGTTGTATCCAGATGCCCCTCGTACCCACCGGTCTaGGGTATCACGTCAGGACCAGGCTGTGGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PVVSRCPSYPPV*GITSGPGCGGL Trigger: AAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGATACAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654933.1 |
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| CDS CAA 90 bp | CAGGTAGGGTTTGTCTATTCCAGATGCCCCTCGTACCCACCGGTCTaGGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTGTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QVGFVYSRCPSYPPV*GITSGPGCGGLVCW Trigger: CCAGCACACAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGAATAGACAAACCCTACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661066.1 |
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| CDS CAA 90 bp | GTGCTGGCCATGGGAGAGTGGCTGGGGCTGAGAGCCAACGTGCCCTaGACATGGTCACTGAGTGGCAGCTCCTACCCTATAAATGTAACC | + |
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Preference number: 6 (lower is better) Translates to: VLAMGEWLGLRANVP*TWSLSGSSYPINVT Trigger: GGTTACATTTATAGGGTAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTCTCCCATGGCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666580.1 |
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| CDS CCA 72 bp | AATAACTCACCAGATGCCCCTCGTACCCACCGGTCTTaGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NNSPDAPRTHRS*VSRQDQAVVAL Trigger: CAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGTGAGTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503929.1 |
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| CDS CCA 72 bp | TTGTCTATTCCAGATGCCCCTCGTACCCACCGGTCTTaGGTATCACGTCAGGACCAGGCTGTGGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSIPDAPRTHRS*VSRQDQAVVAL Trigger: CAAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGAATAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661066.1 |
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| CDS CAA 72 bp | TTTGTCTATTCCAGATGCCCCTCGTACCCACCGGTCTaGGGTATCACGTCAGGACCAGGCTGTGGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FVYSRCPSYPPV*GITSGPGCGGL Trigger: AAGGCCACCACAGCCTGGTCCTGACGTGATACCCAAGACCGGTGGGTACGAGGGGCATCTGGAATAGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661066.1 |
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| CDS CAA 90 bp | GTGCTGGCCATGGGAGAGTGGCTGGGGCTGAGAGCCAACGTGCCCTaGACATGGTCACTGAGTGGCAGCTCCTATAAATGTAACCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: VLAMGEWLGLRANVP*TWSLSGSSYKCNQK Trigger: CTTTTGGTTACATTTATAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTCTCCCATGGCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654933.1 ENST00000661044.1 ENST00000661066.1 ENST00000663587.1 ENST00000668913.1 |
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| CDS CCA 72 bp | GAGTGGCTGGGGCTGAGAGCCAACGTGCCCTTGACATaGTCACTGAGTGGCAGCTCCTACCCTATAAATGTA | + |
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Preference number: 6 (lower is better) Translates to: EWLGLRANVPLT*SLSGSSYPINV Trigger: TACATTTATAGGGTAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666580.1 |
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| CDS CCA 72 bp | GAGTGGCTGGGGCTGAGAGCCAACGTGCCCTTGACATaGTCACTGAGTGGCAGCTCCTATAAATGTAACCAA | + |
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Preference number: 6 (lower is better) Translates to: EWLGLRANVPLT*SLSGSSYKCNQ Trigger: TTGGTTACATTTATAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGCCCCAGCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654933.1 ENST00000661044.1 ENST00000661066.1 ENST00000663587.1 ENST00000668913.1 |
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| CDS CCA 72 bp | GCTGAGAGCCAACGTGCCCTTGACATGGTCACTGAGTaGCAGCTCCTACCCTATAAATGTAACCAAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AESQRALDMVTE*QLLPYKCNQKK Trigger: CTTCTTTTGGTTACATTTATAGGGTAGGAGCTGCCACTCAGTGACCATGTCAAGGGCACGTTGGCTCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666580.1 |
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| CDS GCA 72 bp | CACATGTACAAAGTTGGAGGGAGCTGTTATGAAACATaGACTGAAAATTCAGGTTGCAATGTCAGCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HMYKVGGSCYET*TENSGCNVSKL Trigger: GAGCTTGCTGACATTGCAACCTGAATTTTCAGTGCATGTTTCATAACAGCTCCCTCCAACTTTGTACATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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| CDS TCA 72 bp | CCAAAATATCTTGAGGTTCCCAGGCCTGTCAGAAAGTaGTATTCTTTAATTATCAGAAGGACAGAAACCCTG | + |
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Preference number: 6 (lower is better) Translates to: PKYLEVPRPVRK*YSLIIRRTETL Trigger: CAGGGTTTCTGTCCTTCTGATAATTAAAGAATATCACTTTCTGACAGGCCTGGGAACCTCAAGATATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000654933.1 |
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| CDS CAA 72 bp | GAGTGTATTTCTCTCTTCTCAAGGTTCCAAAATATCTaGAGGTTCCCAGGCCTGTCAGAAAGTGATATTCTT | + |
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Preference number: 6 (lower is better) Translates to: ECISLFSRFQNI*RFPGLSESDIL Trigger: AAGAATATCACTTTCTGACAGGCCTGGGAACCTCAAGATATTTTGGAACCTTGAGAAGAGAGAAATACACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000654933.1 |
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| CDS TCA 72 bp | AGTGTATTTCTCTCTTCTCAAGGTTCCAAAATATCTTaGGGTTCCCAGGCCTGTCAGAAAGTGATATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SVFLSSQGSKIS*GSQACQKVIFF Trigger: AAAGAATATCACTTTCTGACAGGCCTGGGAACCTCAAGATATTTTGGAACCTTGAGAAGAGAGAAATACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000654933.1 |
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| CDS TCA 72 bp | ATTTTAGGTCCTTTAGCAGAAAGCAGGAGGAATACCTaGTTCTTAGTGACAGCATGGGAAATTTCTTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: ILGPLAESRRNT*FLVTAWEISWL Trigger: TAACCAAGAAATTTCCCATGCTGTCACTAAGAATCAGGTATTCCTCCTGCTTTCTGCTAAAGGACCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000505329.2 ENST00000654933.1 ENST00000661044.1 ENST00000661066.1 ENST00000663587.1 ENST00000666580.1 ENST00000668913.1 |
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| CDS TCA 72 bp | TGGTTAATCCATCAGATTGTGGCTGTAAAATCTGTATaGATGAGTGTATTTCTCTCTTCTCAAGGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: WLIHQIVAVKSV*MSVFLSSQGSK Trigger: TTTGGAACCTTGAGAAGAGAGAAATACACTCATTCATACAGATTTTACAGCCACAATCTGATGGATTAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503929.1 ENST00000654933.1 |
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| CDS TCA 72 bp | TTGTATACAAAAAGTTTCAGGAGGTGGATTCTGAGATaGTCAAATAATTGGTGGAAGGAAAGAGAAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LYTKSFRRWILR*SNNWWKEREGL Trigger: TAGACCTTCTCTTTCCTTCCACCAATTATTTGATCATCTCAGAATCCACCTCCTGAAACTTTTTGTATACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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| CDS CAA 72 bp | AGGGAGTTTCAGTGTTTCAGCAAGTTTTTGTTGTTGTaGTTGTTGTTTTGTTGTTGTTGTTGTTGTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: REFQCFSKFLLL*LLFCCCCCCFL Trigger: GAGGAAACAACAACAACAACAACAAAACAACAACAACAACAACAAAAACTTGCTGAAACACTGAAACTCCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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| CDS CAA 72 bp | GAGTTTCAGTGTTTCAGCAAGTTTTTGTTGTTGTTGTaGTTGTTTTGTTGTTGTTGTTGTTGTTTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EFQCFSKFLLLL*LFCCCCCCFLF Trigger: GAAGAGGAAACAACAACAACAACAACAAAACAACAACAACAACAACAAAAACTTGCTGAAACACTGAAACTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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| CDS CAA 72 bp | CAAAGGGAGTTTCAGTGTTTCAGCAAGTTTTTGTTGTaGTTGTTGTTGTTTTGTTGTTGTTGTTGTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QREFQCFSKFLL*LLLFCCCCCCF Trigger: GAAACAACAACAACAACAACAAAACAACAACAACAACAACAAAAACTTGCTGAAACACTGAAACTCCCTTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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| CDS CAA 72 bp | AAGCAAAGGGAGTTTCAGTGTTTCAGCAAGTTTTTGTaGTTGTTGTTGTTGTTTTGTTGTTGTTGTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: KQREFQCFSKFL*LLLLFCCCCCC Trigger: ACAACAACAACAACAACAAAACAACAACAACAACAACAAAAACTTGCTGAAACACTGAAACTCCCTTTGCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000503929.1 ENST00000505329.2 ENST00000661044.1 ENST00000663587.1 |
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