Pregenerated sensors for LINC02430 (Homo sapiens)
Ensembl gene IDs: ENSG00000250252Ensembl transcript IDs: ENST00000504755.2, ENST00000668418.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCTTCCACTTGGTGGCATCATCCCGATCAAAGCAAGAGGAAGGCTaGCTGGGGAGAGAGGCATTAAGATTTGGGGAGAGAGTTGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: SFHLVASSRSKQEEG*LGREALRFGERVEF Trigger: AAACTCAACTCTCTCCCCAAATCTTAATGCCTCTCTCCCCAGTCAGCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 90 bp | AGAACCTGTTTAGAAAATGTGTATCCAACAACTCCTTCCACTTGGTaGCATCATCCCGATCAAAGCAAGAGGAAGGCTGACTGGGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RTCLENVYPTTPSTW*HHPDQSKRKADWGE Trigger: CTCTCCCCAGTCAGCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGAGTTGTTGGATACACATTTTCTAAACAGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 90 bp | GGAAGAACCTGTTTAGAAAATGTGTATCCAACAACTCCTTCCACTTaGTGGCATCATCCCGATCAAAGCAAGAGGAAGGCTGACTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GRTCLENVYPTTPST*WHHPDQSKRKADWG Trigger: TCCCCAGTCAGCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGAGTTGTTGGATACACATTTTCTAAACAGGTTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 90 bp | GATCTTGTTCTTTCTTCTTGTATTCTTCTTTCTTCTTGTTGCTGCTaGTGTGCAGGATGCCATGAAACAAGGGATGCCAGGGTGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: DLVLSSCILLSSCCC*CAGCHETRDARVEK Trigger: CTTTTCCACCCTGGCATCCCTTGTTTCATGGCATCCTGCACATCAGCAGCAACAAGAAGAAAGAAGAATACAAGAAGAAAGAACAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 90 bp | CCTGCGACACAGGAGTATGGAAACCATTTCCAGACCTATCTTTGGTaGGCATTGGTTATATGCCTATTCCCAAATCAATTACCTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: PATQEYGNHFQTYLW*ALVICLFPNQLPHV Trigger: AACATGAGGTAATTGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTGTCGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 90 bp | AGGAATGAGTGTCTAACAACATATGGCACCATATCAGCCCCAAACTaGCGGATTCCACTCCTCTTGAAATGTAAGAAAGAGAAACTTCCA | + |
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Preference number: 5 (lower is better) Translates to: RNECLTTYGTISAPN*RIPLLLKCKKEKLP Trigger: TGGAAGTTTCTCTTTCTTACATTTCAAGAGGAGTGGAATCCGTCAGTTTGGGGCTGATATGGTGCCATATGTTGTTAGACACTCATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS GCA 90 bp | CTCCTCTTGAAATGTAAGAAAGAGAAACTTCCACTTCGTTTAAGCTaGTGTTACCATGATTGCTTCTTCTCAACACTCAGCTTAGATCAC | + |
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Preference number: 5 (lower is better) Translates to: LLLKCKKEKLPLRLS*CYHDCFFSTLSLDH Trigger: GTGATCTAAGCTGAGTGTTGAGAAGAAGCAATCATGGTAACAGCAGCTTAAACGAAGTGGAAGTTTCTCTTTCTTACATTTCAAGAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504755.2 |
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| CDS CCA 90 bp | ATCCAGAAGAATATAAAATCCCTATCTTCCTGCGACACAGGAGTATaGAAACCATTTCCAGACCTATCTTTGGTGAGCATTGGTTATATG | + |
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Preference number: 5 (lower is better) Translates to: IQKNIKSLSSCDTGV*KPFPDLSLVSIGYM Trigger: CATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTGTCGCAGGAAGATAGGGATTTTATATTCTTCTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 90 bp | CACAGGAGTATGGAAACCATTTCCAGACCTATCTTTGGTGAGCATTaGTTATATGCCTATTCCCAAATCAATTACCTCATGTTCTATGTT | + |
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Preference number: 5 (lower is better) Translates to: HRSMETISRPIFGEH*LYAYSQINYLMFYV Trigger: AACATAGAACATGAGGTAATTGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CAA 72 bp | TCAACACTCAGCTTAGATCACAGACTGGCCTCCTTCTaGGTGTCAGCAACATGGATCTTATCCAGACAGACA | + |
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Preference number: 6 (lower is better) Translates to: STLSLDHRLASF*VSATWILSRQT Trigger: TGTCTGTCTGGATAAGATCCATGTTGCTGACACCAAGAAGGAGGCCAGTCTGTGATCTAAGCTGAGTGTTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504755.2 |
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| CDS CAA 72 bp | ACTGTACTCAGCTTAGATCACAGACTGGCCTCCTTCTaGGTGTCAGCAACATGGATCTTATCCAGACAGACA | + |
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Preference number: 6 (lower is better) Translates to: TVLSLDHRLASF*VSATWILSRQT Trigger: TGTCTGTCTGGATAAGATCCATGTTGCTGACACCAAGAAGGAGGCCAGTCTGTGATCTAAGCTGAGTACAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668418.1 |
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| CDS CAA 90 bp | TGCTTCTTCTCAACACTCAGCTTAGATCACAGACTGGCCTCCTTCTaGGTGTCAGCAACATGGATCTTATCCAGACAGACAATATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CFFSTLSLDHRLASF*VSATWILSRQTISR Trigger: TCTGGATATTGTCTGTCTGGATAAGATCCATGTTGCTGACACCAAGAAGGAGGCCAGTCTGTGATCTAAGCTGAGTGTTGAGAAGAAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504755.2 |
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| CDS CAA 90 bp | CTTCTCAACACTGTACTCAGCTTAGATCACAGACTGGCCTCCTTCTaGGTGTCAGCAACATGGATCTTATCCAGACAGACAATATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLNTVLSLDHRLASF*VSATWILSRQTISR Trigger: TCTGGATATTGTCTGTCTGGATAAGATCCATGTTGCTGACACCAAGAAGGAGGCCAGTCTGTGATCTAAGCTGAGTACAGTGTTGAGAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668418.1 |
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| CDS CCA 72 bp | TTAGAAAATGTGTATCCAACAACTCCTTCCACTTGGTaGCATCATCCCGATCAAAGCAAGAGGAAGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LENVYPTTPSTW*HHPDQSKRKAD Trigger: GTCAGCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGAGTTGTTGGATACACATTTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CAA 72 bp | CTGTTTAGAAAATGTGTATCCAACAACTCCTTCCACTaGGTGGCATCATCCCGATCAAAGCAAGAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LFRKCVSNNSFH*VASSRSKQEEG Trigger: GCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGAGTTGTTGGATACACATTTTCTAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 72 bp | CTTTCTTCTTGTATTCTTCTTTCTTCTTGTTGCTGCTaGTGTGCAGGATGCCATGAAACAAGGGATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSCILLSSCCC*CAGCHETRDAR Trigger: CCTGGCATCCCTTGTTTCATGGCATCCTGCACATCAGCAGCAACAAGAAGAAAGAAGAATACAAGAAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 72 bp | TGTTTAGAAAATGTGTATCCAACAACTCCTTCCACTTaGTGGCATCATCCCGATCAAAGCAAGAGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CLENVYPTTPST*WHHPDQSKRKA Trigger: AGCCTTCCTCTTGCTTTGATCGGGATGATGCCACCAAGTGGAAGGAGTTGTTGGATACACATTTTCTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CAA 90 bp | TCTTCCTGCGACACAGGAGTATGGAAACCATTTCCAGACCTATCTTaGGTGAGCATTGGTTATATGCCTATTCCCAAATCAATTACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSCDTGVWKPFPDLS*VSIGYMPIPKSITS Trigger: TGAGGTAATTGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTGTCGCAGGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CAA 90 bp | CTGTGTACCATGATTAGAGAATTGTCACCTTTCAAAAACAATGTCTaGTGTCCCCAGAGCAGGAACATAGCAAGCAAATCACACAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LCTMIRELSPFKNNV*CPQSRNIASKSHSS Trigger: ACTGCTGTGTGATTTGCTTGCTATGTTCCTGCTCTGGGGACACAAGACATTGTTTTTGAAAGGTGACAATTCTCTAATCATGGTACACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CAA 72 bp | GACACAGGAGTATGGAAACCATTTCCAGACCTATCTTaGGTGAGCATTGGTTATATGCCTATTCCCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: DTGVWKPFPDLS*VSIGYMPIPKS Trigger: TGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 72 bp | AGAGAAACTTCCACTTCGTTTAAGCTGCTGTTACCATaGTTGCTTCTTCTCAACACTGTACTCAGCTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: RETSTSFKLLLP*LLLLNTVLSLD Trigger: ATCTAAGCTGAGTACAGTGTTGAGAAGAAGCAATCATGGTAACAGCAGCTTAAACGAAGTGGAAGTTTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668418.1 |
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| CDS GCA 72 bp | GACAATATCCAGAAGAATATAAAATCCCTATCTTCCTaGGACACAGGAGTATGGAAACCATTTCCAGACCTA | + |
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Preference number: 6 (lower is better) Translates to: DNIQKNIKSLSS*DTGVWKPFPDL Trigger: TAGGTCTGGAAATGGTTTCCATACTCCTGTGTCGCAGGAAGATAGGGATTTTATATTCTTCTGGATATTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 72 bp | AATATAAAATCCCTATCTTCCTGCGACACAGGAGTATaGAAACCATTTCCAGACCTATCTTTGGTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: NIKSLSSCDTGV*KPFPDLSLVSI Trigger: AATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTGTGTCGCAGGAAGATAGGGATTTTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS TCA 72 bp | CAGGAGTATGGAAACCATTTCCAGACCTATCTTTGGTaGGCATTGGTTATATGCCTATTCCCAAATCAATTA | + |
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Preference number: 6 (lower is better) Translates to: QEYGNHFQTYLW*ALVICLFPNQL Trigger: TAATTGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCATACTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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| CDS CCA 72 bp | ATGGAAACCATTTCCAGACCTATCTTTGGTGAGCATTaGTTATATGCCTATTCCCAAATCAATTACCTCATG | + |
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Preference number: 6 (lower is better) Translates to: METISRPIFGEH*LYAYSQINYLM Trigger: CATGAGGTAATTGATTTGGGAATAGGCATATAACCAATGCTCACCAAAGATAGGTCTGGAAATGGTTTCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504755.2 ENST00000668418.1 |
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