Pregenerated sensors for LINC02428 (Homo sapiens)
Ensembl gene IDs: ENSG00000248740Ensembl transcript IDs: ENST00000508099.5, ENST00000510200.2, ENST00000513793.5, ENST00000656104.1, ENST00000656681.1, ENST00000657481.1, ENST00000664815.1, ENST00000666142.1, ENST00000668077.1, ENST00000669559.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGGGTGCGCGCACCATaGGCGAGCCGAAGCAGGGTGAGGCATTGCCTCACTTGGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RECQTVGAGQWVRAP*ASRSRVRHCLTWEA Trigger: CGCTTCCCAAGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS CCA 90 bp | GGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCATGCGCGAGCCGAAGCAGGGTGAGGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVHLTRECQTVGAGQ*VRAPCASRSRVRHC Trigger: GCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 90 bp | GGGTCCTACGCCCACAGAGTCTCGTTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSYAHRVSLIASTAV*DQTARRQRGWGRGT Trigger: GGTGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAACGAGACTCTGTGGGCGTAGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000656104.1 ENST00000656681.1 ENST00000668077.1 |
||
| CDS TCA 90 bp | AGCCACTCTGATGGGAGCAGCAGGGTTGAAGGCAGGATGGCAGAGTaGTGCCAGATCACGGAGAACTTTTTACATCCAGGAAGCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHSDGSSRVEGRMAE*CQITENFLHPGSPD Trigger: GTCTGGGCTTCCTGGATGTAAAAAGTTCTCCGTGATCTGGCATCACTCTGCCATCCTGCCTTCAACCCTGCTGCTCCCATCAGAGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS CCA 90 bp | CCAAGATGGCCGAATAGGAACAGTTCCGGTCTACAGCTTCCAGCGTaGGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRWPNRNSSGLQLPA*ATQKTVISAFPSEV Trigger: TACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCCCACGCTGGAAGCTGTAGACCGGAACTGTTCCTATTCGGCCATCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000513793.5 ENST00000656104.1 ENST00000656681.1 ENST00000668077.1 |
||
| CDS GCA 90 bp | AGGATAGTGCACTCAACCAGAAAGATGGTTGTAGCTGTCCCACTTTaGCGTAATTGCAAAGTAGCAGTCCAACAGCTGACGCTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIVHSTRKMVVAVPL*RNCKVAVQQLTLDF Trigger: GAAGTCCAGCGTCAGCTGTTGGACTGCTACTTTGCAATTACGGCAAAGTGGGACAGCTACAACCATCTTTCTGGTTGAGTGCACTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS TCA 90 bp | GACAGGCGGCTCTCTAATCTCTCCTGCCTGGCACCTGAGGGCGTTTaGGTTTGTAATCTATGTTTAGAATCTATTAGATTTGCCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DRRLSNLSCLAPEGV*VCNLCLESIRFALN Trigger: ATTTAAGGCAAATCTAATAGATTCTAAACATAGATTACAAACTCAAACGCCCTCAGGTGCCAGGCAGGAGAGATTAGAGAGCCGCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS CCA 90 bp | AATATTGTATGTTCTCACAAGTGGGTGCTGAATGATGAGTACATATaGACACATAGAGGGAACAACAGACAGTTGGTCTTATCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NIVCSHKWVLNDEYI*THRGNNRQLVLSEG Trigger: ACCCTCTGATAAGACCAACTGTCTGTTGTTCCCTCTATGTGTCCATATGTACTCATCATTCAGCACCCACTTGTGAGAACATACAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS CCA 72 bp | CTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCATGCGCGAGCCGAAGCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTRECQTVGAGQ*VRAPCASRSRV Trigger: CACCCTGCTTCGGCTCGCGCATGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS GCA 72 bp | CAGACAGTGGGCGCAGGTCAGTGGGTGCGCGCACCATaGGCGAGCCGAAGCAGGGTGAGGCATTGCCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: QTVGAGQWVRAP*ASRSRVRHCLT Trigger: AGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 72 bp | AGTGGGTGCGCGCACCATGCGCGAGCCGAAGCAGGGTaGGGCATTGCCTCACTTGGGAAGCGCAAGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGCAHHARAEAG*GIASLGKRKGS Trigger: TGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGCGCGCACCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS CAA 90 bp | GCGCGCACCATGCGCGAGCCGAAGCAGGGTGAGGCATTGCCTCACTaGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARTMREPKQGEALPH*GSARGQGVPFLSQR Trigger: TCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGCGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS CAA 72 bp | ATGCGCGAGCCGAAGCAGGGTGAGGCATTGCCTCACTaGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MREPKQGEALPH*GSARGQGVPFL Trigger: CAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 72 bp | GGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGTACGGGGTTCATCTCACTGGCTCGGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GDAEDGDFCISI*GTGFISLARRV Trigger: GACCCTCCGAGCCAGTGAGATGAACCCCGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668077.1 |
||
| CDS TCA 72 bp | CCTGGCTCGGAGGGTCCTACGCCCACAGAGTCTCGTTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSEGPTPTESR*LLAQQSEIKLQ Trigger: TTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAACGAGACTCTGTGGGCGTAGGACCCTCCGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 72 bp | GGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTaGCGGATGGCACCTGGAAAATCGGGTCACTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQGVPFLSQRKG*RMAPGKSGHSH Trigger: GTGGGAGTGACCCGATTTTCCAGGTGCCATCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 72 bp | GGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGTACGGGGTTCATCTCACTAGGGAGTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GDAEDGDFCISI*GTGFISLGSAR Trigger: TCTGGCACTCCCTAGTGAGATGAACCCCGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000513793.5 ENST00000656104.1 ENST00000656681.1 |
||
| CDS TCA 72 bp | ACTGGCTCGGAGGGTCCTACGCCCACAGAGTCTCGTTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TGSEGPTPTESR*LLAQQSEIKLQ Trigger: TTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAACGAGACTCTGTGGGCGTAGGACCCTCCGAGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668077.1 |
||
| CDS CCA 72 bp | GCCACTCTGATGGGAGCAGCAGGGTTGAAGGCAGGATaGCAGAGTGATGCCAGATCACGGAGAACTTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: ATLMGAAGLKAG*QSDARSRRTFY Trigger: GTAAAAAGTTCTCCGTGATCTGGCATCACTCTGCCATCCTGCCTTCAACCCTGCTGCTCCCATCAGAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS CCA 72 bp | CCGAATAGGAACAGTTCCGGTCTACAGCTTCCAGCGTaGGCGACGCAGAAGACGGTGATTTCTGCATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PNRNSSGLQLPA*ATQKTVISAFP Trigger: TGGAAATGCAGAAATCACCGTCTTCTGCGTCGCCCACGCTGGAAGCTGTAGACCGGAACTGTTCCTATTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000513793.5 ENST00000656104.1 ENST00000656681.1 ENST00000668077.1 |
||
| CDS CCA 72 bp | CTTTCTGAGTCAAAGAAAGGGGTGACGGATGGCACCTaGAAAATCGGGTCACTCCCACCCGAATACTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSESKKGVTDGT*KIGSLPPEYCA Trigger: AGCGCAGTATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCCATCCGTCACCCCTTTCTTTGACTCAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656104.1 ENST00000656681.1 |
||
| CDS CCA 72 bp | TCCATTCTGACAGGCGGCTCTCTAATCTCTCCTGCCTaGCACCTGAGGGCGTTTGAGTTTGTAATCTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: SILTGGSLISPA*HLRAFEFVIYV Trigger: AACATAGATTACAAACTCAAACGCCCTCAGGTGCCAGGCAGGAGAGATTAGAGAGCCGCCTGTCAGAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS TCA 72 bp | ATCCAGGAGGGTGCTCCAGTGACACTGTCAAGATCATaGAATAGAACCTTCCAGTGCACATCCTCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IQEGAPVTLSRS*NRTFQCTSSCR Trigger: TCTGCAAGAGGATGTGCACTGGAAGGTTCTATTTCATGATCTTGACAGTGTCACTGGAGCACCCTCCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668077.1 |
||
| CDS GCA 72 bp | CCTGGGCTAGACTTTTATTGTCCCCTTGGCATTATCTaGAAGTCAGATTCTCCCACTAAGCAAGCTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLDFYCPLGII*KSDSPTKQALR Trigger: CCTGAGAGCTTGCTTAGTGGGAGAATCTGACTTGCAGATAATGCCAAGGGGACAATAAAAGTCTAGCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508099.5 |
||
| CDS GCA 72 bp | CACTCAACCAGAAAGATGGTTGTAGCTGTCCCACTTTaGCGTAATTGCAAAGTAGCAGTCCAACAGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: HSTRKMVVAVPL*RNCKVAVQQLT Trigger: CGTCAGCTGTTGGACTGCTACTTTGCAATTACGGCAAAGTGGGACAGCTACAACCATCTTTCTGGTTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS CCA 72 bp | ATTTCAGAAGACATCTATGAGCTAAGTCCTTCAGGCTaGATTGCTGCGAGGAGGAGCCAAGATGGCCGAATA | + |
|
Preference number: 6 (lower is better) Translates to: ISEDIYELSPSG*IAARRSQDGRI Trigger: TATTCGGCCATCTTGGCTCCTCCTCGCAGCAATCCAGCCTGAAGGACTTAGCTCATAGATGTCTTCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513793.5 |
||
| CDS CCA 72 bp | AGTACATATGGACACATAGAGGGAACAACAGACAGTTaGTCTTATCAGAGGGTGGAGGGTGCAAGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: STYGHIEGTTDS*SYQRVEGARKE Trigger: CTCCTTCCTTGCACCCTCCACCCTCTGATAAGACCAACTGTCTGTTGTTCCCTCTATGTGTCCATATGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS CAA 72 bp | GAGTACATATGGACACATAGAGGGAACAACAGACAGTaGGTCTTATCAGAGGGTGGAGGGTGCAAGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EYIWTHRGNNRQ*VLSEGGGCKEG Trigger: TCCTTCCTTGCACCCTCCACCCTCTGATAAGACCAACTGTCTGTTGTTCCCTCTATGTGTCCATATGTACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS TCA 72 bp | GTTCAAGATCAAGATTCCAGTCAAGTTGGTTTCTGGTaGGGATTCTCTTCTTGGCTTGCAGATGGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VQDQDSSQVGFW*GFSSWLADGCP Trigger: AGGACAGCCATCTGCAAGCCAAGAAGAGAATCCTCACCAGAAACCAACTTGACTGGAATCTTGATCTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656104.1 ENST00000656681.1 ENST00000657481.1 ENST00000664815.1 ENST00000669559.1 |
||
| CDS CAA 72 bp | GGAAGCAAGAAGTTCAAGATCAAGATTCCAGTCAAGTaGGTTTCTGGTGAGGATTCTCTTCTTGGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSKKFKIKIPVK*VSGEDSLLGLQ Trigger: CTGCAAGCCAAGAAGAGAATCCTCACCAGAAACCAACTTGACTGGAATCTTGATCTTGAACTTCTTGCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656104.1 ENST00000656681.1 ENST00000657481.1 ENST00000664815.1 ENST00000669559.1 |
||
| CDS CCA 72 bp | ATGTCCCCACATGTCTTTTCCTCTGTATGTGCCATGTaGAATCTTAGTCAAACTCATAGAAGTAGAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MSPHVFSSVCAM*NLSQTHRSREW Trigger: CCACTCTCTACTTCTATGAGTTTGACTAAGATTCCACATGGCACATACAGAGGAAAAGACATGTGGGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS CCA 72 bp | TGTTCTCACAAGTGGGTGCTGAATGATGAGTACATATaGACACATAGAGGGAACAACAGACAGTTGGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CSHKWVLNDEYI*THRGNNRQLVL Trigger: TAAGACCAACTGTCTGTTGTTCCCTCTATGTGTCCATATGTACTCATCATTCAGCACCCACTTGTGAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS TCA 72 bp | CTCTCTAATCTCTCCTGCCTGGCACCTGAGGGCGTTTaGGTTTGTAATCTATGTTTAGAATCTATTAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: LSNLSCLAPEGV*VCNLCLESIRF Trigger: AAATCTAATAGATTCTAAACATAGATTACAAACTCAAACGCCCTCAGGTGCCAGGCAGGAGAGATTAGAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS TCA 72 bp | GAAAAACAAATATTGTATGTTCTCACAAGTGGGTGCTaGATGATGAGTACATATGGACACATAGAGGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: EKQILYVLTSGC*MMSTYGHIEGT Trigger: TGTTCCCTCTATGTGTCCATATGTACTCATCATTCAGCACCCACTTGTGAGAACATACAATATTTGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669559.1 |
||
| CDS CAA 90 bp | CATCCACAGCATTGGCCTCATCATCCTTTTTATCAGCATAGAATTTaGTCCAAATCCAGTTTCTTTCTACTATATGACACATTCATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HPQHWPHHPFYQHRI*SKSSFFLLYDTFID Trigger: GTCTATGAATGTGTCATATAGTAGAAAGAAACTGGATTTGGACAAAATTCTATGCTGATAAAAAGGATGATGAGGCCAATGCTGTGGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||
| CDS CAA 72 bp | CATTGGCCTCATCATCCTTTTTATCAGCATAGAATTTaGTCCAAATCCAGTTTCTTTCTACTATATGACACA | + |
|
Preference number: 6 (lower is better) Translates to: HWPHHPFYQHRI*SKSSFFLLYDT Trigger: TGTGTCATATAGTAGAAAGAAACTGGATTTGGACAAAATTCTATGCTGATAAAAAGGATGATGAGGCCAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000510200.2 ENST00000666142.1 |
||