Pregenerated sensors for LINC02426 (Homo sapiens)
Ensembl gene IDs: ENSG00000257747Ensembl transcript IDs: ENST00000550506.2, ENST00000660121.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGGGGGTGTCCTGAGGCTGATGTGTGTACCCAGCTCTTCACAGTaGTGGCCATATCAGTTGCCACATTCACTCTATGATACAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: AGGVLRLMCVPSSSQ*WPYQLPHSLYDTAT Trigger: GGTAGCTGTATCATAGAGTGAATGTGGCAACTGATATGGCCATCACTGTGAAGAGCTGGGTACACACATCAGCCTCAGGACACCCCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS CCA 90 bp | CCCGAGAGAGGATATTCTCATGACAGCCTGCACAATGGAAACACTTaGGAAGTTTTCCAAAGTCCTGATGTCCAGGTGACAAGTAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: PERGYSHDSLHNGNT*EVFQSPDVQVTSRV Trigger: TACTCTACTTGTCACCTGGACATCAGGACTTTGGAAAACTTCCCAAGTGTTTCCATTGTGCAGGCTGTCATGAGAATATCCTCTCTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS GCA 90 bp | GCTGAAGTAATAGAAATAACTAGAAAGGAGACAGTTGCTGTTGGATaGTTCTTAAAAGCCTCCTGTTGCACACCGTCTCTCTGGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AEVIEITRKETVAVG*FLKASCCTPSLWFF Trigger: GAAGAACCAGAGAGACGGTGTGCAACAGGAGGCTTTTAAGAAGCATCCAACAGCAACTGTCTCCTTTCTAGTTATTTCTATTACTTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS TCA 90 bp | TGTTCAAATCCAATAGGTAAGAGTGCAAAAGGCTTGAAAGATTGGTaGTGGCTACTTCTTTCTCTAGTAAGTCTTCCCGAGAGAGGATAT | + |
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Preference number: 5 (lower is better) Translates to: CSNPIGKSAKGLKDW*WLLLSLVSLPERGY Trigger: ATATCCTCTCTCGGGAAGACTTACTAGAGAAAGAAGTAGCCATCACCAATCTTTCAAGCCTTTTGCACTCTTACCTATTGGATTTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS GCA 90 bp | GTCTGTGAAGCACTTATGAACCAGAGAAATTTCAAGGAACCCAGTTaGTGGAAATACATCTGGTGTCTAATAAGGTTCTATTCTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: VCEALMNQRNFKEPS*WKYIWCLIRFYSPV Trigger: AACAGGAGAATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTTCCTTGAAATTTCTCTGGTTCATAAGTGCTTCACAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS CCA 90 bp | ATGAACCAGAGAAATTTCAAGGAACCCAGTTGCTGGAAATACATCTaGTGTCTAATAAGGTTCTATTCTCCTGTTCTCTCTCAGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: MNQRNFKEPSCWKYI*CLIRFYSPVLSQSF Trigger: GAAAGACTGAGAGAGAACAGGAGAATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTTCCTTGAAATTTCTCTGGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS CCA 90 bp | TACATAAGAATATCTTGGAGGAGACCCAGTTGCTGGAAATACATCTaGTGTCTAATAAGGTTCTATTCTCCTGTTCTCTCTCAGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: YIRISWRRPSCWKYI*CLIRFYSPVLSQSF Trigger: GAAAGACTGAGAGAGAACAGGAGAATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTCTCCTCCAAGATATTCTTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660121.1 |
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| CDS TCA 90 bp | GCCCTTCTCCAACTTAGCTTTTATCTCCAATTAAAGCTGACAGCTTaGTCTCTGTCATACTTCCAAATATATCTCTCAATTTGTTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: ALLQLSFYLQLKLTA*SLSYFQIYLSICSK Trigger: TTTGGAACAAATTGAGAGATATATTTGGAAGTATGACAGAGATCAAGCTGTCAGCTTTAATTGGAGATAAAAGCTAAGTTGGAGAAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS TCA 90 bp | AATATAACCTCCAAAAGCACTGAGAGGGACAATCATAACCCAAGATaGCCTTACATAAGTTGTTCAAATCCAATAGGTAAGAGTGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: NITSKSTERDNHNPR*PYISCSNPIGKSAK Trigger: TTTTGCACTCTTACCTATTGGATTTGAACAACTTATGTAAGGTCATCTTGGGTTATGATTGTCCCTCTCAGTGCTTTTGGAGGTTATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS TCA 72 bp | GTCCTGAGGCTGATGTGTGTACCCAGCTCTTCACAGTaGTGGCCATATCAGTTGCCACATTCACTCTATGAT | + |
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Preference number: 6 (lower is better) Translates to: VLRLMCVPSSSQ*WPYQLPHSLYD Trigger: ATCATAGAGTGAATGTGGCAACTGATATGGCCATCACTGTGAAGAGCTGGGTACACACATCAGCCTCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS GCA 72 bp | CCTGTTCTCTCTCAGTCTTTCTCTGGGGCTGGAGGCTaGATGTTCAGCTTTATTCTCTTTTTCTCCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: PVLSQSFSGAGG*MFSFILFFSRY Trigger: GTATCTGGAGAAAAAGAGAATAAAGCTGAACATGCAGCCTCCAGCCCCAGAGAAAGACTGAGAGAGAACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS GCA 72 bp | GTGTACCCAGCTCTTCACAGTGATGGCCATATCAGTTaGCACATTCACTCTATGATACAGCTACCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VYPALHSDGHIS*HIHSMIQLPLQ Trigger: TTGCAGAGGTAGCTGTATCATAGAGTGAATGTGGCAACTGATATGGCCATCACTGTGAAGAGCTGGGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS CCA 72 bp | GGATATTCTCATGACAGCCTGCACAATGGAAACACTTaGGAAGTTTTCCAAAGTCCTGATGTCCAGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: GYSHDSLHNGNT*EVFQSPDVQVT Trigger: TGTCACCTGGACATCAGGACTTTGGAAAACTTCCCAAGTGTTTCCATTGTGCAGGCTGTCATGAGAATATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS TCA 72 bp | ACAGTGATGGCCATATCAGTTGCCACATTCACTCTATaGTACAGCTACCTCTGCAAAAGTAGAACAGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: TVMAISVATFTL*YSYLCKSRTAF Trigger: AAACGCTGTTCTACTTTTGCAGAGGTAGCTGTATCATAGAGTGAATGTGGCAACTGATATGGCCATCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS CCA 72 bp | ATATCTTGGAGGAGACCCAGTTGCTGGAAATACATCTaGTGTCTAATAAGGTTCTATTCTCCTGTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISWRRPSCWKYI*CLIRFYSPVLS Trigger: AGAGAGAACAGGAGAATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTCTCCTCCAAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660121.1 |
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| CDS TCA 72 bp | TCCAAAAGCACTGAGAGGGACAATCATAACCCAAGATaGCCTTACATAAGTTGTTCAAATCCAATAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SKSTERDNHNPR*PYISCSNPIGK Trigger: CTTACCTATTGGATTTGAACAACTTATGTAAGGTCATCTTGGGTTATGATTGTCCCTCTCAGTGCTTTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550506.2 ENST00000660121.1 |
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| CDS GCA 72 bp | GCACTTATGAACCAGAGAAATTTCAAGGAACCCAGTTaGTGGAAATACATCTGGTGTCTAATAAGGTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: ALMNQRNFKEPS*WKYIWCLIRFY Trigger: ATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTTCCTTGAAATTTCTCTGGTTCATAAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS CCA 72 bp | AGAAATTTCAAGGAACCCAGTTGCTGGAAATACATCTaGTGTCTAATAAGGTTCTATTCTCCTGTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RNFKEPSCWKYI*CLIRFYSPVLS Trigger: AGAGAGAACAGGAGAATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTTCCTTGAAATTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS CAA 72 bp | AGCACTTATGAACCAGAGAAATTTCAAGGAACCCAGTaGCTGGAAATACATCTGGTGTCTAATAAGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: STYEPEKFQGTQ*LEIHLVSNKVL Trigger: TAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTTCCTTGAAATTTCTCTGGTTCATAAGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550506.2 |
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| CDS GCA 72 bp | AGTAGTTACATAAGAATATCTTGGAGGAGACCCAGTTaGTGGAAATACATCTGGTGTCTAATAAGGTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: SSYIRISWRRPS*WKYIWCLIRFY Trigger: ATAGAACCTTATTAGACACCAGATGTATTTCCAGCAACTGGGTCTCCTCCAAGATATTCTTATGTAACTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660121.1 |
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