Pregenerated sensors for LINC02425 (Homo sapiens)
Ensembl gene IDs: ENSG00000256259Ensembl transcript IDs: ENST00000536217.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGATTCCAAGCGTGCAGACCATTGAATTCACATGGTTTGATTACTaGGTAATTCTTAAAGTCTCTTTACTGGAGTGTGACATTTATCTA | + |
|
Preference number: 5 (lower is better) Translates to: KIPSVQTIEFTWFDY*VILKVSLLECDIYL Trigger: TAGATAAATGTCACACTCCAGTAAAGAGACTTTAAGAATTACTCAGTAATCAAACCATGTGAATTCAATGGTCTGCACGCTTGGAATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536217.1 |
||
| CDS CAA 90 bp | GCATCGTTGACCAATTATTCAGGGCTAGTCCTTGCTCTCTTTCTCTaGGTTAGTGGCTATTTCTGGCAGTTCCTAAAACCGAGGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASLTNYSGLVLALFL*VSGYFWQFLKPRQP Trigger: TGGCTGCCTCGGTTTTAGGAACTGCCAGAAATAGCCACTAACCAAGAGAAAGAGAGCAAGGACTAGCCCTGAATAATTGGTCAACGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536217.1 |
||
| CDS CAA 90 bp | TTTCCAGGAAGCAAAAGGAACAGGAAACCAACGAAATCAGCATCGTaGACCAATTATTCAGGGCTAGTCCTTGCTCTCTTTCTCTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FPGSKRNRKPTKSAS*TNYSGLVLALFLLV Trigger: AACCAAGAGAAAGAGAGCAAGGACTAGCCCTGAATAATTGGTCAACGATGCTGATTTCGTTGGTTTCCTGTTCCTTTTGCTTCCTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536217.1 |
||
| CDS CAA 72 bp | AGCAAAAGGAACAGGAAACCAACGAAATCAGCATCGTaGACCAATTATTCAGGGCTAGTCCTTGCTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKRNRKPTKSAS*TNYSGLVLALF Trigger: AAAGAGAGCAAGGACTAGCCCTGAATAATTGGTCAACGATGCTGATTTCGTTGGTTTCCTGTTCCTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536217.1 |
||