Pregenerated sensors for LINC02422 (Homo sapiens)
Ensembl gene IDs: ENSG00000255760Ensembl transcript IDs: ENST00000535163.1, ENST00000662662.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AAGATCGCTGCAGGAGATTTCCGCGTCGGGCAGATGAAAGCGCTCTaGAAGCCCGGGTGTTATCTGCGGGCCGGGTCCGCGGCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIAAGDFRVGQMKAL*KPGCYLRAGSAASL Trigger: CAGAGAAGCCGCGGACCCGGCCCGCAGATAACACCCGGGCTTGCAGAGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGCAGCGATCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS TCA 90 bp | GCTGAAGGTAGAAGATCGCTGCAGGAGATTTCCGCGTCGGGCAGATaGAAGCGCTCTGCAAGCCCGGGTGTTATCTGCGGGCCGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEGRRSLQEISASGR*KRSASPGVICGPGP Trigger: CGGACCCGGCCCGCAGATAACACCCGGGCTTGCAGAGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGCAGCGATCTTCTACCTTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS GCA 90 bp | GTGCCCTCTGGGTGCTGCGGATGCACGCTGAAGGTAGAAGATCGCTaGAGGAGATTTCCGCGTCGGGCAGATGAAAGCGCTCTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSGCCGCTLKVEDR*RRFPRRADESALQA Trigger: GGCTTGCAGAGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGCAGCGATCTTCTACCTTCAGCGTGCATCCGCAGCACCCAGAGGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS TCA 90 bp | AAAAATAACCACTCAGTCTTTAGCGTCAGCTCACCCTTCAGGGTTTaGCACCTGGAGCAGCAGTCAAAGAAGCTGAAAACACGACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNNHSVFSVSSPFRV*HLEQQSKKLKTRPS Trigger: GGAAGGTCGTGTTTTCAGCTTCTTTGACTGCTGCTCCAGGTGTCAAACCCTGAAGGGTGAGCTGACGCTAAAGACTGAGTGGTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000535163.1 ENST00000662662.1 |
||
| CDS TCA 90 bp | CGCTTTTGCACTCCATTGATCTTGATAGCCCTGGAATTCACTGGGTaGGTCCTCTTGTGTTCTAAACCTCCTGACATGGTTCAGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFCTPLILIALEFTG*VLLCSKPPDMVQIE Trigger: CTCAATCTGAACCATGTCAGGAGGTTTAGAACACAAGAGGACTCACCCAGTGAATTCCAGGGCTATCAAGATCAATGGAGTGCAAAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS GCA 72 bp | GCAGGAGATTTCCGCGTCGGGCAGATGAAAGCGCTCTaGAAGCCCGGGTGTTATCTGCGGGCCGGGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGDFRVGQMKAL*KPGCYLRAGSA Trigger: CGCGGACCCGGCCCGCAGATAACACCCGGGCTTGCAGAGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS TCA 72 bp | AGAAGATCGCTGCAGGAGATTTCCGCGTCGGGCAGATaGAAGCGCTCTGCAAGCCCGGGTGTTATCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSLQEISASGR*KRSASPGVICG Trigger: CCCGCAGATAACACCCGGGCTTGCAGAGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGCAGCGATCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS GCA 72 bp | GGGTGCTGCGGATGCACGCTGAAGGTAGAAGATCGCTaGAGGAGATTTCCGCGTCGGGCAGATGAAAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCCGCTLKVEDR*RRFPRRADESA Trigger: AGCGCTTTCATCTGCCCGACGCGGAAATCTCCTGCAGCGATCTTCTACCTTCAGCGTGCATCCGCAGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS GCA 72 bp | GGTTCTCAATCTCTCTTTAACGTGCCCTCTGGGTGCTaGGGATGCACGCTGAAGGTAGAAGATCGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSQSLFNVPSGC*GCTLKVEDRCR Trigger: CCTGCAGCGATCTTCTACCTTCAGCGTGCATCCGCAGCACCCAGAGGGCACGTTAAAGAGAGATTGAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS TCA 72 bp | CACTCAGTCTTTAGCGTCAGCTCACCCTTCAGGGTTTaGCACCTGGAGCAGCAGTCAAAGAAGCTGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: HSVFSVSSPFRV*HLEQQSKKLKT Trigger: TGTTTTCAGCTTCTTTGACTGCTGCTCCAGGTGTCAAACCCTGAAGGGTGAGCTGACGCTAAAGACTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000535163.1 ENST00000662662.1 |
||
| CDS CAA 72 bp | CCTTCCCTTGAATTCCGTCTGGTTTTGCGACTTCCCTaGACTGCAGGACGCTTTTGCACTCCATTGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLEFRLVLRLP*TAGRFCTPLIL Trigger: CAAGATCAATGGAGTGCAAAAGCGTCCTGCAGTCAAGGGAAGTCGCAAAACCAGACGGAATTCAAGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS TCA 72 bp | CTTCCCTTGAATTCCGTCTGGTTTTGCGACTTCCCTTaGCTTGATGAGGAGGAACTCAGATGCCTTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLNSVWFCDFP*LDEEELRCLEL Trigger: CAACTCAAGGCATCTGAGTTCCTCCTCATCAAGTCAAGGGAAGTCGCAAAACCAGACGGAATTCAAGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535163.1 |
||
| CDS TCA 72 bp | ACTCCATTGATCTTGATAGCCCTGGAATTCACTGGGTaGGTCCTCTTGTGTTCTAAACCTCCTGACATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TPLILIALEFTG*VLLCSKPPDMV Trigger: AACCATGTCAGGAGGTTTAGAACACAAGAGGACTCACCCAGTGAATTCCAGGGCTATCAAGATCAATGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||
| CDS CAA 90 bp | TCATTGTTTTGGGGAGTGTCTCAAATAAGAACTGAATCAGCAGTTTaGCTGGTGGTTCTCAATCTCTCTTTAACGTGCCCTCTGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLFWGVSQIRTESAV*LVVLNLSLTCPLGA Trigger: AGCACCCAGAGGGCACGTTAAAGAGAGATTGAGAACCACCAGCAAAACTGCTGATTCAGTTCTTATTTGAGACACTCCCCAAAACAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662662.1 |
||