Pregenerated sensors for LINC02419 (Homo sapiens)
Ensembl gene IDs: ENSG00000256906Ensembl transcript IDs: ENST00000535487.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGGCTGCCCAGCAGGCTCATCCTGATTCTACTGAAACCCGAGTCTaGGGCGCAGCCAGTCCGCGGGAGCACGAGGCAGGGCGTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PAAQQAHPDSTETRV*GAASPREHEAGRLD Trigger: ATCCAGACGCCCTGCCTCGTGCTCCCGCGGACTGGCTGCGCCCCAGACTCGGGTTTCAGTAGAATCAGGATGAGCCTGCTGGGCAGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 90 bp | CATGCCCAGTTGGCTGGAGGAACGGCCAGGGTAGGTGGCAGGAGGTaGGGCATGTTTGTGGCAGGGCCGGGCTTGAGCAAAGCTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: HAQLAGGTARVGGRR*GMFVAGPGLSKAEV Trigger: GACCTCAGCTTTGCTCAAGCCCGGCCCTGCCACAAACATGCCTCACCTCCTGCCACCTACCCTGGCCGTTCCTCCAGCCAACTGGGCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 90 bp | ATCAAATATGCATTCCCATGGAACTTGTGGGAGTTTTCATTCTCATaGCCAGTTGGCTGGAGGAACGGCCAGGGTAGGTGGCAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: IKYAFPWNLWEFSFS*PVGWRNGQGRWQEV Trigger: CACCTCCTGCCACCTACCCTGGCCGTTCCTCCAGCCAACTGGGCATGAGAATGAAAACTCCCACAAGTTCCATGGGAATGCATATTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 90 bp | TTTACTGTGGATGGCTACCTGCATGACAGGTGGAATAGCTGTAGCTaGACCCAGAAGACAACTGACTTTCACCCTCAACAGCCCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FTVDGYLHDRWNSCS*TQKTTDFHPQQPLL Trigger: CAGCAGGGGCTGTTGAGGGTGAAAGTCAGTTGTCTTCTGGGTGCAGCTACAGCTATTCCACCTGTCATGCAGGTAGCCATCCACAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 90 bp | TGTGTTAAGAGGGCAGATCTTATGGTCAGTGTTCTTTTGCTCAGCTaGAGCCCTCCGCAAACAATCTCCCTCCTATTTTCTCCCGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: CVKRADLMVSVLLLS*SPPQTISLLFSPVY Trigger: GTACACGGGAGAAAATAGGAGGGAGATTGTTTGCGGAGGGCTGCAGCTGAGCAAAAGAACACTGACCATAAGATCTGCCCTCTTAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 90 bp | GGAGTCCACATGACTTTCAGAAGTGACAGGGCAGTGACCAGCAAGTaGGGCTCAGGGAAATCCAACTTTTATTTAGTTAGCCTGATATTT | + |
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Preference number: 5 (lower is better) Translates to: GVHMTFRSDRAVTSK*GSGKSNFYLVSLIF Trigger: AAATATCAGGCTAACTAAATAAAAGTTGGATTTCCCTGAGCCTCACTTGCTGGTCACTGCCCTGTCACTTCTGAAAGTCATGTGGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CCA 90 bp | ATCCTGTATCACGCTCTTAAAAATGTGTTAAGAGGGCAGATCTTATaGTCAGTGTTCTTTTGCTCAGCTGCAGCCCTCCGCAAACAATCT | + |
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Preference number: 5 (lower is better) Translates to: ILYHALKNVLRGQIL*SVFFCSAAALRKQS Trigger: AGATTGTTTGCGGAGGGCTGCAGCTGAGCAAAAGAACACTGACCATAAGATCTGCCCTCTTAACACATTTTTAAGAGCGTGATACAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CCA 72 bp | CAGCAGGCTCATCCTGATTCTACTGAAACCCGAGTCTaGGGCGCAGCCAGTCCGCGGGAGCACGAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: QQAHPDSTETRV*GAASPREHEAG Trigger: CCCTGCCTCGTGCTCCCGCGGACTGGCTGCGCCCCAGACTCGGGTTTCAGTAGAATCAGGATGAGCCTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CAA 72 bp | GCGGTGAAGCTGCTGACGGGCAGCAATCAGACGCTGTaGCCAGGCTCTCAGCCCTCAGTCCTCCGGGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: AVKLLTGSNQTL*PGSQPSVLRAK Trigger: CTTAGCCCGGAGGACTGAGGGCTGAGAGCCTGGCAACAGCGTCTGATTGCTGCCCGTCAGCAGCTTCACCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 72 bp | GCAGGAGGTGAGGCATGTTTGTGGCAGGGCCGGGCTTaGGCAAAGCTGAGGTCTGCCCTGAGCTCACTGCGA | + |
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Preference number: 6 (lower is better) Translates to: AGGEACLWQGRA*AKLRSALSSLR Trigger: TCGCAGTGAGCTCAGGGCAGACCTCAGCTTTGCTCAAGCCCGGCCCTGCCACAAACATGCCTCACCTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 72 bp | TTTGTGGCAGGGCCGGGCTTGAGCAAAGCTGAGGTCTaGCCTGAGCTCACTGCGAAGACTGATCTGCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: FVAGPGLSKAEV*PELTAKTDLRG Trigger: CCCACGCAGATCAGTCTTCGCAGTGAGCTCAGGGCAGACCTCAGCTTTGCTCAAGCCCGGCCCTGCCACAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 72 bp | ACAGCCCCTGCTGCCTTTCAGAACCCTCTCTGTGTGTaGTGTAATAATGGGGCCCTGCCAGGTGTGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TAPAAFQNPLCV*CNNGALPGVVA Trigger: AGCCACCACACCTGGCAGGGCCCCATTATTACATCACACACAGAGAGGGTTCTGAAAGGCAGCAGGGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CAA 72 bp | CACGAGGCAGGGCGTCTGGATGGTGAGCTGCATTTTTaGCTTCCTGCCTTCCTGACCATGGCAATCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: HEAGRLDGELHF*LPAFLTMAITW Trigger: CCACGTGATTGCCATGGTCAGGAAGGCAGGAAGCAAAAAATGCAGCTCACCATCCAGACGCCCTGCCTCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 72 bp | GCATTCCCATGGAACTTGTGGGAGTTTTCATTCTCATaGCCAGTTGGCTGGAGGAACGGCCAGGGTAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AFPWNLWEFSFS*PVGWRNGQGRW Trigger: CCACCTACCCTGGCCGTTCCTCCAGCCAACTGGGCATGAGAATGAAAACTCCCACAAGTTCCATGGGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 72 bp | GGGAGAAAAGCTGACGGTTTACTGTGGATGGCTACCTaGATGACAGGTGGAATAGCTGTAGCTGCACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GRKADGLLWMAT*MTGGIAVAAPR Trigger: TCTGGGTGCAGCTACAGCTATTCCACCTGTCATGCAGGTAGCCATCCACAGTAAACCGTCAGCTTTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 72 bp | GATGGCTACCTGCATGACAGGTGGAATAGCTGTAGCTaGACCCAGAAGACAACTGACTTTCACCCTCAACAG | + |
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Preference number: 6 (lower is better) Translates to: DGYLHDRWNSCS*TQKTTDFHPQQ Trigger: CTGTTGAGGGTGAAAGTCAGTTGTCTTCTGGGTGCAGCTACAGCTATTCCACCTGTCATGCAGGTAGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CAA 72 bp | TGTGTTAAGAGGGCAGATCTTATGGTCAGTGTTCTTTaGCTCAGCTGCAGCCCTCCGCAAACAATCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: CVKRADLMVSVL*LSCSPPQTISL Trigger: GAGGGAGATTGTTTGCGGAGGGCTGCAGCTGAGCAAAAGAACACTGACCATAAGATCTGCCCTCTTAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS GCA 72 bp | AGGGCAGATCTTATGGTCAGTGTTCTTTTGCTCAGCTaGAGCCCTCCGCAAACAATCTCCCTCCTATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RADLMVSVLLLS*SPPQTISLLFS Trigger: AGAAAATAGGAGGGAGATTGTTTGCGGAGGGCTGCAGCTGAGCAAAAGAACACTGACCATAAGATCTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CCA 72 bp | CACGCTCTTAAAAATGTGTTAAGAGGGCAGATCTTATaGTCAGTGTTCTTTTGCTCAGCTGCAGCCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: HALKNVLRGQIL*SVFFCSAAALR Trigger: GCGGAGGGCTGCAGCTGAGCAAAAGAACACTGACCATAAGATCTGCCCTCTTAACACATTTTTAAGAGCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CCA 72 bp | TTCCAGTTCATCAAATATGCATTCCCATGGAACTTGTaGGAGTTTTCATTCTCATGCCCAGTTGGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FQFIKYAFPWNL*EFSFSCPVGWR Trigger: CCTCCAGCCAACTGGGCATGAGAATGAAAACTCCCACAAGTTCCATGGGAATGCATATTTGATGAACTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 72 bp | ATGACTTTCAGAAGTGACAGGGCAGTGACCAGCAAGTaGGGCTCAGGGAAATCCAACTTTTATTTAGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: MTFRSDRAVTSK*GSGKSNFYLVS Trigger: GCTAACTAAATAAAAGTTGGATTTCCCTGAGCCTCACTTGCTGGTCACTGCCCTGTCACTTCTGAAAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS TCA 72 bp | AACTGCAGTCCTCATTTATCAGCGTCCTATTTCCTGTaGCTTAGCCCAAATGTCTTTATGGCCCAAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NCSPHLSASYFL*LSPNVFMAQVK Trigger: TTTCACTTGGGCCATAAAGACATTTGGGCTAAGTCACAGGAAATAGGACGCTGATAAATGAGGACTGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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| CDS CAA 72 bp | CTGGAAATAGCATCGCTTGGATTGCAATCATATGCCTaGAGGAAGCCACCTTCTTGTAGTAGAAAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LEIASLGLQSYA*RKPPSCSRKVK Trigger: TTTGACTTTTCTACTACAAGAAGGTGGCTTCCTCAAGGCATATGATTGCAATCCAAGCGATGCTATTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535487.1 |
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