Pregenerated sensors for LINC02418 (Homo sapiens)
Ensembl gene IDs: ENSG00000214039Ensembl transcript IDs: ENST00000291374.11, ENST00000567788.1, ENST00000660273.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTCCAGGAGCCGTGCGGCCAGTGGACCCAGGTGTGTGTGGCGTCTaGCCTCCCCCACCGCCACCTGACTCAGGAGGTACAAGAAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FPGAVRPVDPGVCGV*PPPPPPDSGGTRSR Trigger: TCTGCTTCTTGTACCTCCTGAGTCAGGTGGCGGTGGGGGAGGGCAGACGCCACACACACCTGGGTCCACTGGCCGCACGGCTCCTGGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CCA 90 bp | ACCAGGAGCCCCTGGGGAGTCTTGTTCCTTGCTCCTGGTGGAGCCTaGTCAGCACCTCACTCCGTGGCTTCGCGCTTCGCAGACACAGCG | + |
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Preference number: 5 (lower is better) Translates to: TRSPWGVLFLAPGGA*SAPHSVASRFADTA Trigger: CGCTGTGTCTGCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | CCTTCTGTGGACCAGGAGCCCCTGGGGAGTCTTGTTCCTTGCTCCTaGTGGAGCCTGGTCAGCACCTCACTCCGTGGCTTCGCGCTTCGC | + |
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Preference number: 5 (lower is better) Translates to: PSVDQEPLGSLVPCS*WSLVSTSLRGFALR Trigger: GCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | AGATGTGGGTCGCTGCCTTCCCAACAGGCTCCTGCCCGGTTCACCTaGGGAAGCGCAGGGCTGCGGGCACAGGATTCTCCCATCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: RCGSLPSQQAPARFT*GSAGLRAQDSPIRH Trigger: GTGTCTGATGGGAGAATCCTGTGCCCGCAGCCCTGCGCTTCCCCAGGTGAACCGGGCAGGAGCCTGTTGGGAAGGCAGCGACCCACATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660273.1 |
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| CDS GCA 90 bp | TTGCTGCCTGTGGCAATGCTGCGAATGGCCCAGCCCCGGGTCCCATaGCACTGCTACAGGAGAGAGGTGGGGTTGGACCCACACAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLPVAMLRMAQPRVP*HCYRREVGLDPHRS Trigger: TGACCTGTGTGGGTCCAACCCCACCTCTCTCCTGTAGCAGTGGCATGGGACCCGGGGCTGGGCCATTCGCAGCATTGCCACAGGCAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | TCTGTGGACCAGGAGCCCCTGGGGAGTCTTGTTCCTTGCTCCTGGTaGAGCCTGGTCAGCACCTCACTCCGTGGCTTCGCGCTTCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SVDQEPLGSLVPCSW*SLVSTSLRGFALRR Trigger: TCTGCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | AGTGGACCCAGGTGTGTGTGGCGTCTGCCCTCCCCCACCGCCACCTaGCTCAGGAGGTACAAGAAGCAGAAACAGCCAAGGCCTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SGPRCVWRLPSPTAT*LRRYKKQKQPRPGV Trigger: GACACCAGGCCTTGGCTGTTTCTGCTTCTTGTACCTCCTGAGTCAGGTGGCGGTGGGGGAGGGCAGACGCCACACACACCTGGGTCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS GCA 90 bp | GTCGTCTCTACCAGCAGGCTGGGGGATCCCCGAGGGTCTGTGTTCTaGTCACAGCTGGATCCACTTCCAGCTCTGAGTGCCGTAGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: VVSTSRLGDPRGSVF*SQLDPLPALSAVGV Trigger: GACACCTACGGCACTCAGAGCTGGAAGTGGATCCAGCTGTGAGCAGAACACAGACCCTCGGGGATCCCCCAGCCTGCTGGTAGAGACGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CCA 90 bp | TGGTATGTTTGTGGGCGTCCCTGCCTTCTGTGGACCAGGAGCCCCTaGGGAGTCTTGTTCCTTGCTCCTGGTGGAGCCTGGTCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: WYVCGRPCLLWTRSP*GVLFLAPGGAWSAP Trigger: AGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | CACGACACTCCGCGCCCACCAGCGGCTCAGCAGCCATCTTGGTGGTaGGCTGGACTTTCTCTGTATCACAGTGCTTGCATCCAGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: HDTPRPPAAQQPSWW*AGLSLYHSACIQVT Trigger: GGTGACCTGGATGCAAGCACTGTGATACAGAGAAAGTCCAGCTCACCACCAAGATGGCTGCTGAGCCGCTGGTGGGCGCGGAGTGTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | CCTCCCCAGATGGCGAAGTTCCCTTTGCCACCGCCCGCGCCTTCATaGTCTATTGTGCCTCATCGCTCACGCGTCCACACTACTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PPQMAKFPLPPPAPS*SIVPHRSRVHTTCS Trigger: TGAGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCATCTGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS GCA 90 bp | TCAAAGCTGGGCAGAGGATGCCTCCCCAGATGGCGAAGTTCCCTTTaGCACCGCCCGCGCCTTCATGCTCTATTGTGCCTCATCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: SKLGRGCLPRWRSSL*HRPRLHALLCLIAH Trigger: GTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCATCTGGGGAGGCATCCTCTGCCCAGCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CCA 90 bp | TCTTGTTCCTTGCTCCTGGTGGAGCCTGGTCAGCACCTCACTCCGTaGCTTCGCGCTTCGCAGACACAGCGCACCTGTCATCGGATGAAT | + |
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Preference number: 5 (lower is better) Translates to: SCSLLLVEPGQHLTP*LRASQTQRTCHRMN Trigger: ATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | ATTCCTCGGCCCTGGCCAGAAATGGAGGGTGGACTTACAGCCAGGTaGTCAGGTACCAGATTGGTGGTTACTCTTCTGGCCTCGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: IPRPWPEMEGGLTAR*SGTRLVVTLLASRA Trigger: TGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGGCCGAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | TGGCGAAGTTCCCTTTGCCACCGCCCGCGCCTTCATGCTCTATTGTaGCTCATCGCTCACGCGTCCACACTACTTGCTCAACACCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: WRSSLCHRPRLHALL*LIAHASTLLAQHLQ Trigger: TTGCAGGTGTTGAGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CCA 90 bp | AGGTCCGGGCGGGTGCTGGGAACCACGAGGGCAGCGAGGTTGTCCTaGCAGAGTAAATGTTCGTTGTTTAGCCACCAGTCTGTGGTACTA | + |
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Preference number: 5 (lower is better) Translates to: RSGRVLGTTRAARLS*QSKCSLFSHQSVVL Trigger: TAGTACCACAGACTGGTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCTCGTGGTTCCCAGCACCCGCCCGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS TCA 90 bp | CTCCGTGGCTTCGCGCTTCGCAGACACAGCGCACCTGTCATCGGATaGATTGATTGGGCATCTTGTCGAACACCAGCACGGGTTGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: LRGFALRRHSAPVIG*IDWASCRTPARVVL Trigger: TAGCACAACCCGTGCTGGTGTTCGACAAGATGCCCAATCAATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGCGCGAAGCCACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | GGAACTATTTACTCATGGTATGTTTGTGGGCGTCCCTGCCTTCTGTaGACCAGGAGCCCCTGGGGAGTCTTGTTCCTTGCTCCTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: GTIYSWYVCGRPCLL*TRSPWGVLFLAPGG Trigger: TCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | ACGTCACATGGCTCGGCAGGTGCTCTGCGTATGACAGCGCCTGGCTaGATTCCACTTAGACAAGATGTTGCAACAAGGGCCTGCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TSHGSAGALRMTAPG*IPLRQDVATRACRT Trigger: TGTTCTGCAGGCCCTTGTTGCAACATCTTGTCTAAGTGGAATTCAGCCAGGCGCTGTCATACGCAGAGCACCTGCCGAGCCATGTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS TCA 90 bp | TGGCAGAGAGCAGCACGTCACATGGCTCGGCAGGTGCTCTGCGTATaGCAGCGCCTGGCTGAATTCCACTTAGACAAGATGTTGCAACAA | + |
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Preference number: 5 (lower is better) Translates to: WQRAARHMARQVLCV*QRLAEFHLDKMLQQ Trigger: TTGTTGCAACATCTTGTCTAAGTGGAATTCAGCCAGGCGCTGTCATACGCAGAGCACCTGCCGAGCCATGTGACGTGCTGCTCTCTGCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS TCA 90 bp | TGGCTTCGCGCTTCGCAGACACAGCGCACCTGTCATCGGATGAATTaGTTGGGCATCTTGTCGAACACCAGCACGGGTTGTGCTAATGAT | + |
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Preference number: 5 (lower is better) Translates to: WLRASQTQRTCHRMN*LGILSNTSTGCAND Trigger: ATCATTAGCACAACCCGTGCTGGTGTTCGACAAGATGCCCAATCAATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGCGCGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | TTGGTGGTTACTCTTCTGGCCTCGAGGGCATCAGCGTTGCTGACATaGACACAGCAGCCCCTTTCAGTCAGGTTTTGCTTTCAGTTACCC | + |
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Preference number: 5 (lower is better) Translates to: LVVTLLASRASALLT*TQQPLSVRFCFQLP Trigger: GGGTAACTGAAAGCAAAACCTGACTGAAAGGGGCTGCTGTGTTCATGTCAGCAACGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | CCAGATTGGTGGTTACTCTTCTGGCCTCGAGGGCATCAGCGTTGCTaGCATGAACACAGCAGCCCCTTTCAGTCAGGTTTTGCTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: PDWWLLFWPRGHQRC*HEHSSPFQSGFAFS Trigger: ACTGAAAGCAAAACCTGACTGAAAGGGGCTGCTGTGTTCATGTCAGCAACGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | CTTCACATTGGAACTATTTACTCATGGTATGTTTGTGGGCGTCCCTaGCTTCTGTGGACCAGGAGCCCCTGGGGAGTCTTGTTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LHIGTIYSWYVCGRP*LLWTRSPWGVLFLA Trigger: AGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | AAGAGAAAAAGAGAGAATTCCTCGGCCCTGGCCAGAAATGGAGGGTaGACTTACAGCCAGGTGCTCAGGTACCAGATTGGTGGTTACTCT | + |
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Preference number: 5 (lower is better) Translates to: KRKRENSSALARNGG*TYSQVLRYQIGGYS Trigger: AGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGGCCGAGGAATTCTCTCTTTTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | GAAAATAAAGAGAAAAAGAGAGAATTCCTCGGCCCTGGCCAGAAATaGAGGGTGGACTTACAGCCAGGTGCTCAGGTACCAGATTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: ENKEKKREFLGPGQK*RVDLQPGAQVPDWW Trigger: CCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGGCCGAGGAATTCTCTCTTTTTCTCTTTATTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | TTTCAGTCTTCTTCACATTGGAACTATTTACTCATGGTATGTTTGTaGGCGTCCCTGCCTTCTGTGGACCAGGAGCCCCTGGGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FQSSSHWNYLLMVCL*ASLPSVDQEPLGSL Trigger: AAGACTCCCCAGGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGAAGACTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | GGACTTTCTCTGTATCACAGTGCTTGCATCCAGGTCACCCTTATTTaGCTTAAGGATGGTCCCAAAAGACCATGTGCACGTGGCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GLSLYHSACIQVTLI*LKDGPKRPCARGKG Trigger: GCCTTTGCCACGTGCACATGGTCTTTTGGGACCATCCTTAAGTCAAATAAGGGTGACCTGGATGCAAGCACTGTGATACAGAGAAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | TTCTGTGGCATTTTCAGTCTTCTTCACATTGGAACTATTTACTCATaGTATGTTTGTGGGCGTCCCTGCCTTCTGTGGACCAGGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: FCGIFSLLHIGTIYS*YVCGRPCLLWTRSP Trigger: GGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGAAGACTGAAAATGCCACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | TTTCTCTCAGGAAGTGAGAGCAAACGCATGCTTCCTTTGCATGAATaGCATCTTCCTTCTGAGGCTCTCAAATGGGGTAACTCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FLSGSESKRMLPLHE*HLPSEALKWGNSAS Trigger: GGAAGCAGAGTTACCCCATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCCTGAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | AAGAACAAGAACAAGGTGAGATCTGGGTGTCCCTGCAGCAAAGGCTaGCTCCAGGTGAATCTTCATTTAGAAACAGAGCAGCCAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: KNKNKVRSGCPCSKG*LQVNLHLETEQPRT Trigger: TGTTCTTGGCTGCTCTGTTTCTAAATGAAGATTCACCTGGAGGCAGCCTTTGCTGCAGGGACACCCAGATCTCACCTTGTTCTTGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | TGGAGATCAGGATGTCTTCAATGTCTAAAAGAATGCACGAGACCCTaGGAATGCACCGGGAACATGCTCCCCAAACATATCCTTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: WRSGCLQCLKECTRP*ECTGNMLPKHILAC Trigger: ACAAGCAAGGATATGTTTGGGGAGCATGTTCCCGGTGCATTCTCAGGGTCTCGTGCATTCTTTTAGACATTGAAGACATCCTGATCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 90 bp | TGGCTTCATTTTCAGGCTTTCTCTCAGGAAGTGAGAGCAAACGCATaGTTCCTTTGCATGAATGCCATCTTCCTTCTGAGGCTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: WLHFQAFSQEVRANA*FLCMNAIFLLRLSN Trigger: ATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCCTGAGAGAAAGCCTGAAAATGAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | AACAGTGGGCTCACACTTCTGTGGCATTTTCAGTCTTCTTCACATTaGAACTATTTACTCATGGTATGTTTGTGGGCGTCCCTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: NSGLTLLWHFQSSSH*NYLLMVCLWASLPS Trigger: AGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGAAGACTGAAAATGCCACAGAAGTGTGAGCCCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 90 bp | TTGGTCCTCAGCTTCCTCAAGTCATTCCCTGTGTGTTTTTGGCTTTaGCGCCCTTCTGCAACTGTATTCACATCCTCTTTCTATATGCAT | + |
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Preference number: 5 (lower is better) Translates to: LVLSFLKSFPVCFWL*RPSATVFTSSFYMH Trigger: ATGCATATAGAAAGAGGATGTGAATACAGTTGCAGAAGGGCGTCAAAGCCAAAAACACACAGGGAATGACTTGAGGAAGCTGAGGACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 90 bp | GAAGAGTTCTTCTCAATCCCTTCAGCAGAAAGAATTTCAAAACAGTaGGCTCACACTTCTGTGGCATTTTCAGTCTTCTTCACATTGGAA | + |
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Preference number: 5 (lower is better) Translates to: EEFFSIPSAERISKQ*AHTSVAFSVFFTLE Trigger: TTCCAATGTGAAGAAGACTGAAAATGCCACAGAAGTGTGAGCCCACTGTTTTGAAATTCTTTCTGCTGAAGGGATTGAGAAGAACTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291374.11 ENST00000567788.1 |
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| CDS CCA 90 bp | TCCACTTACTTCTCAATCCCTTCAGCAGAAAGAATTTCAAAACAGTaGGCTCACACTTCTGTGGCATTTTCAGTCTTCTTCACATTGGAA | + |
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Preference number: 5 (lower is better) Translates to: STYFSIPSAERISKQ*AHTSVAFSVFFTLE Trigger: TTCCAATGTGAAGAAGACTGAAAATGCCACAGAAGTGTGAGCCCACTGTTTTGAAATTCTTTCTGCTGAAGGGATTGAGAAGTAAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660273.1 |
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| CDS TCA 90 bp | TTTCAGTCAGGTTTTGCTTTCAGTTACCCACGATCAACCACCGTCTaGAAATATGCAGTGGATCACTCCAGAAATAAATCATTTATAAGT | + |
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Preference number: 5 (lower is better) Translates to: FQSGFAFSYPRSTTV*KYAVDHSRNKSFIS Trigger: ACTTATAAATGATTTATTTCTGGAGTGATCCACTGCATATTTTCAGACGGTGGTTGATCGTGGGTAACTGAAAGCAAAACCTGACTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | GGGGAAACAGTAGCCTGGTGTGGAGGTCCGGGCGGGTaGTGGGAACCACGAGGGCAGCGAGGTTGTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GETVAWCGGPGG*WEPRGQRGCPG Trigger: GCCAGGACAACCTCGCTGCCCTCGTGGTTCCCAGCACCCGCCCGGACCTCCACACCAGGCTACTGTTTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS GCA 72 bp | GTGGCAATGCTGCGAATGGCCCAGCCCCGGGTCCCATaGCACTGCTACAGGAGAGAGGTGGGGTTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: VAMLRMAQPRVP*HCYRREVGLDP Trigger: TGGGTCCAACCCCACCTCTCTCCTGTAGCAGTGGCATGGGACCCGGGGCTGGGCCATTCGCAGCATTGCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | GTCCCTGCCTTCTGTGGACCAGGAGCCCCTGGGGAGTCTTGTTCCTaGCTCCTGGTGGAGCCTGGTCAGCACCTCACTCCGTGGCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: VPAFCGPGAPGESCS*LLVEPGQHLTPWLR Trigger: GCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGGGCTCCTGGTCCACAGAAGGCAGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | GCTGGCAGAGAGCAGCACGTCACATGGCTCGGCAGGTaGTCTGCGTATGACAGCGCTGGCTCTGGCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGREQHVTWLGR*SAYDSAGSGLV Trigger: GACCAAGCCAGAGCCAGCGCTGTCATACGCAGAGCACCTGCCGAGCCATGTGACGTGCTGCTCTCTGCCAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291374.11 ENST00000660273.1 |
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| CDS CCA 72 bp | CCCTGGGGAGTCTTGTTCCTTGCTCCTGGTGGAGCCTaGTCAGCACCTCACTCCGTGGCTTCGCGCTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: PWGVLFLAPGGA*SAPHSVASRFA Trigger: TGCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAAGGAACAAGACTCCCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | ACCAGCAGGCTGGGGGATCCCCGAGGGTCTGTGTTCTaGTCACAGCTGGATCCACTTCCAGCTCTGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: TSRLGDPRGSVF*SQLDPLPALSA Trigger: GGCACTCAGAGCTGGAAGTGGATCCAGCTGTGAGCAGAACACAGACCCTCGGGGATCCCCCAGCCTGCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CCA 72 bp | AGCGCAAGTCCTGCTGGAAAGGAAGGCGATCAGGGCTaGCAGAGAGCAGCACGTCACATGGCTCGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SASPAGKEGDQG*QRAARHMARQV Trigger: CACCTGCCGAGCCATGTGACGTGCTGCTCTCTGCCAGCCCTGATCGCCTTCCTTTCCAGCAGGACTTGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | GGGGCCTCAAGGTCCAGTGTGAAGCGCAAGTCCTGCTaGAAAGGAAGGCGATCAGGGCTGGCAGAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GASRSSVKRKSC*KGRRSGLAESS Trigger: GCTGCTCTCTGCCAGCCCTGATCGCCTTCCTTTCCAGCAGGACTTGCGCTTCACACTGGACCTTGAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CCA 72 bp | TTGCTCCTGGTGGAGCCTGGTCAGCACCTCACTCCGTaGCTTCGCGCTTCGCAGACACAGCGCACCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLVEPGQHLTP*LRASQTQRTCH Trigger: ATGACAGGTGCGCTGTGTCTGCGAAGCGCGAAGCCACGGAGTGAGGTGCTGACCAGGCTCCACCAGGAGCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS TCA 72 bp | GCGCTGGCTCTGGCTTGGTCGCCTGCGTCCGGAACCTaGAATCCACAAAGGTGCACACAGATGTGGGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALALAWSPASGT*NPQRCTQMWVA Trigger: AGCGACCCACATCTGTGTGCACCTTTGTGGATTTCAGGTTCCGGACGCAGGCGACCAAGCCAGAGCCAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291374.11 ENST00000660273.1 |
||
| CDS GCA 72 bp | CATGGGGCCTCAAGGTCCAGTGTGAAGCGCAAGTCCTaGTGGAAAGGAAGGCGATCAGGGCTGGCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGASRSSVKRKS*WKGRRSGLAES Trigger: GCTCTCTGCCAGCCCTGATCGCCTTCCTTTCCAGCAGGACTTGCGCTTCACACTGGACCTTGAGGCCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | GCTGGCAGAGAGCAGCACGTCACATGGCTCGGCAGGTaGTCTGCGTATGACAGCGCCTGGCTGAATTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: AGREQHVTWLGR*SAYDSAWLNST Trigger: AGTGGAATTCAGCCAGGCGCTGTCATACGCAGAGCACCTGCCGAGCCATGTGACGTGCTGCTCTCTGCCAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CCA 72 bp | AGCCCCGGGTCCCATGCCACTGCTACAGGAGAGAGGTaGGGTTGGACCCACACAGGTCAAATAGGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGSHATATGER*GWTHTGQIGCC Trigger: GCAGCATCCTATTTGACCTGTGTGGGTCCAACCCCACCTCTCTCCTGTAGCAGTGGCATGGGACCCGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 90 bp | GTGTGGAGGTCCGGGCGGGTGCTGGGAACCACGAGGGCAGCGAGGTaGTCCTGGCAGAGTAAATGTTCGTTGTTTAGCCACCAGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VWRSGRVLGTTRAAR*SWQSKCSLFSHQSV Trigger: CACAGACTGGTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCTCGTGGTTCCCAGCACCCGCCCGGACCTCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS TCA 72 bp | CCGCGCCCACCAGCGGCTCAGCAGCCATCTTGGTGGTaGGCTGGACTTTCTCTGTATCACAGTGCTTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PRPPAAQQPSWW*AGLSLYHSACI Trigger: GATGCAAGCACTGTGATACAGAGAAAGTCCAGCTCACCACCAAGATGGCTGCTGAGCCGCTGGTGGGCGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | ATGGCGAAGTTCCCTTTGCCACCGCCCGCGCCTTCATaGTCTATTGTGCCTCATCGCTCACGCGTCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: MAKFPLPPPAPS*SIVPHRSRVHT Trigger: AGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 72 bp | TCCGGGCGGGTGCTGGGAACCACGAGGGCAGCGAGGTaGTCCTGGCAGAGTAAATGTTCGTTGTTTAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGRVLGTTRAAR*SWQSKCSLFSH Trigger: GTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCTCGTGGTTCCCAGCACCCGCCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 90 bp | ATCAAAGCTGGGCAGAGGATGCCTCCCCAGATGGCGAAGTTCCCTTaGCCACCGCCCGCGCCTTCATGCTCTATTGTGCCTCATCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IKAGQRMPPQMAKFP*PPPAPSCSIVPHRS Trigger: TGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCATCTGGGGAGGCATCCTCTGCCCAGCTTTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 90 bp | AGATGGCGAAGTTCCCTTTGCCACCGCCCGCGCCTTCATGCTCTATaGTGCCTCATCGCTCACGCGTCCACACTACTTGCTCAACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWRSSLCHRPRLHAL*CLIAHASTLLAQHL Trigger: CAGGTGTTGAGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACTTCGCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS GCA 72 bp | TCTGCGTATGACAGCGCTGGCTCTGGCTTGGTCGCCTaGGTCCGGAACCTGAAATCCACAAAGGTGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: SAYDSAGSGLVA*VRNLKSTKVHT Trigger: TGTGTGCACCTTTGTGGATTTCAGGTTCCGGACGCAGGCGACCAAGCCAGAGCCAGCGCTGTCATACGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291374.11 ENST00000660273.1 |
||
| CDS GCA 72 bp | TCCCTTTGCCACCGCCCGCGCCTTCATGCTCTATTGTaGCTCATCGCTCACGCGTCCACACTACTTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLCHRPRLHALL*LIAHASTLLAQ Trigger: TTGAGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 72 bp | GAGGGTGGACTTACAGCCAGGTGCTCAGGTACCAGATaGGTGGTTACTCTTCTGGCCTCGAGGGCATCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: EGGLTARCSGTR*VVTLLASRASA Trigger: CGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 72 bp | AGTTCCCTTTGCCACCGCCCGCGCCTTCATGCTCTATaGTGCCTCATCGCTCACGCGTCCACACTACTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLCHRPRLHAL*CLIAHASTLLA Trigger: AGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGAGCATGAAGGCGCGGGCGGTGGCAAAGGGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS TCA 72 bp | GGCTCGGCAGGTGCTCTGCGTATGACAGCGCCTGGCTaGATTCCACTTAGACAAGATGTTGCAACAAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSAGALRMTAPG*IPLRQDVATRA Trigger: GGCCCTTGTTGCAACATCTTGTCTAAGTGGAATTCAGCCAGGCGCTGTCATACGCAGAGCACCTGCCGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS TCA 72 bp | GCAGCACGTCACATGGCTCGGCAGGTGCTCTGCGTATaGCAGCGCCTGGCTGAATTCCACTTAGACAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AARHMARQVLCV*QRLAEFHLDKM Trigger: CATCTTGTCTAAGTGGAATTCAGCCAGGCGCTGTCATACGCAGAGCACCTGCCGAGCCATGTGACGTGCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS GCA 72 bp | CCCTGGCCAGAAATGGAGGGTGGACTTACAGCCAGGTaGTCAGGTACCAGATTGGTGGTTACTCTTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWPEMEGGLTAR*SGTRLVVTLLA Trigger: GGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CCA 72 bp | GTGGACTTACAGCCAGGTGCTCAGGTACCAGATTGGTaGTTACTCTTCTGGCCTCGAGGGCATCAGCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDLQPGAQVPDW*LLFWPRGHQRC Trigger: GCAACGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CCA 72 bp | AGGGTGGACTTACAGCCAGGTGCTCAGGTACCAGATTaGTGGTTACTCTTCTGGCCTCGAGGGCATCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RVDLQPGAQVPD*WLLFWPRGHQR Trigger: ACGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | CGGGTGCTGGGAACCACGAGGGCAGCGAGGTTGTCCTaGCAGAGTAAATGTTCGTTGTTTAGCCACCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVLGTTRAARLS*QSKCSLFSHQS Trigger: AGACTGGTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCTCGTGGTTCCCAGCACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 90 bp | CCAGAAATGGAGGGTGGACTTACAGCCAGGTGCTCAGGTACCAGATaGGTGGTTACTCTTCTGGCCTCGAGGGCATCAGCGTTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PEMEGGLTARCSGTR*VVTLLASRASALLT Trigger: TGTCAGCAACGCTGATGCCCTCGAGGCCAGAAGAGTAACCACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | GAGCACCCAGTTAGGATCAATGATCAACTCCTAGATCAATCACCATaGCTGCCTGTGGCAATGCTGCGAATGGCCCAGCCCCGGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EHPVRINDQLLDQSP*LPVAMLRMAQPRVP Trigger: TGGGACCCGGGGCTGGGCCATTCGCAGCATTGCCACAGGCAGCAATGGTGATTGATCTAGGAGTTGATCATTGATCCTAACTGGGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS TCA 72 bp | TTCGCGCTTCGCAGACACAGCGCACCTGTCATCGGATaGATTGATTGGGCATCTTGTCGAACACCAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: FALRRHSAPVIG*IDWASCRTPAR Trigger: CCGTGCTGGTGTTCGACAAGATGCCCAATCAATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGCGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | AGCCTGGCACAGTCCTTCTCCACCCTATCCCTGACATaGATTATTCCTTTGCCCGGCATGTTCACGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLAQSFSTLSLT*IIPLPGMFTLQ Trigger: CTGCAGCGTGAACATGCCGGGCAAAGGAATAATGCATGTCAGGGATAGGGTGGAGAAGGACTGTGCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | AGAGAGAATTCCTCGGCCCTGGCCAGAAATGGAGGGTaGACTTACAGCCAGGTGCTCAGGTACCAGATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RENSSALARNGG*TYSQVLRYQIG Trigger: ACCAATCTGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGGCCGAGGAATTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 72 bp | CGCTTCGCAGACACAGCGCACCTGTCATCGGATGAATaGATTGGGCATCTTGTCGAACACCAGCACGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RFADTAHLSSDE*IGHLVEHQHGL Trigger: CAACCCGTGCTGGTGTTCGACAAGATGCCCAATCAATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 72 bp | GATGAAGCCTGGCACAGTCCTTCTCCACCCTATCCCTaGCATGCATTATTCCTTTGCCCGGCATGTTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: DEAWHSPSPPYP*HALFLCPACSR Trigger: GCGTGAACATGCCGGGCAAAGGAATAATGCATGTCAGGGATAGGGTGGAGAAGGACTGTGCCAGGCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 72 bp | GCTTCGCAGACACAGCGCACCTGTCATCGGATGAATTaGTTGGGCATCTTGTCGAACACCAGCACGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASQTQRTCHRMN*LGILSNTSTGC Trigger: ACAACCCGTGCTGGTGTTCGACAAGATGCCCAATCAATTCATCCGATGACAGGTGCGCTGTGTCTGCGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | CTCCTAGGTGAAGTTACTGGCACTGTGAGCAGAACCTaGCCAAAATGGCAGATCTCCATGGGGCCTCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGEVTGTVSRT*PKWQISMGPQG Trigger: ACCTTGAGGCCCCATGGAGATCTGCCATTTTGGGCAGGTTCTGCTCACAGTGCCAGTAACTTCACCTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | GAGAAAAAGAGAGAATTCCTCGGCCCTGGCCAGAAATaGAGGGTGGACTTACAGCCAGGTGCTCAGGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: EKKREFLGPGQK*RVDLQPGAQVP Trigger: TGGTACCTGAGCACCTGGCTGTAAGTCCACCCTCCATTTCTGGCCAGGGCCGAGGAATTCTCTCTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 72 bp | TCCTTCTCCACCCTATCCCTGACATGCATTATTCCTTaGCCCGGCATGTTCACGCTGCAGACACGACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSTLSLTCIIP*PGMFTLQTRHS Trigger: GGAGTGTCGTGTCTGCAGCGTGAACATGCCGGGCAAAGGAATAATGCATGTCAGGGATAGGGTGGAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 72 bp | TCTGGCAAGATAAACTCCTATTCACATCCCAGGGAGTaGTCAAAGCTGGGCAGAGGATGCCTCCCCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SGKINSYSHPRE*SKLGRGCLPRW Trigger: CCATCTGGGGAGGCATCCTCTGCCCAGCTTTGATCACTCCCTGGGATGTGAATAGGAGTTTATCTTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS GCA 72 bp | ACCTGGGAGCTGTCTAAGGGGCTCTTGGATGGACTTTaGAGCCATATCACACTCCTAAGAGGTGTGGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TWELSKGLLDGL*SHITLLRGVGL Trigger: TAAACCCACACCTCTTAGGAGTGTGATATGGCTGCAAAGTCCATCCAAGAGCCCCTTAGACAGCTCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660273.1 |
||
| CDS CCA 72 bp | TCTTCACATTGGAACTATTTACTCATGGTATGTTTGTaGGCGTCCCTGCCTTCTGTGGACCAGGAGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSHWNYLLMVCL*ASLPSVDQEPL Trigger: CAGGGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | AAGGCCTGGTGTCCTCAAATAGGTGGCAGAATGACGTaGACCCTGAATAAGACGATGAGGCAGGAGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KAWCPQIGGRMT*TLNKTMRQERR Trigger: TCTTCTCTCCTGCCTCATCGTCTTATTCAGGGTCCACGTCATTCTGCCACCTATTTGAGGACACCAGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 72 bp | GTTAGGATCAATGATCAACTCCTAGATCAATCACCATaGCTGCCTGTGGCAATGCTGCGAATGGCCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRINDQLLDQSP*LPVAMLRMAQP Trigger: GGGCTGGGCCATTCGCAGCATTGCCACAGGCAGCAATGGTGATTGATCTAGGAGTTGATCATTGATCCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | AACAAGGTGAGATCTGGGTGTCCCTGCAGCAAAGGCTaGCTCCAGGTGAATCTTCATTTAGAAACAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NKVRSGCPCSKG*LQVNLHLETEQ Trigger: CTGCTCTGTTTCTAAATGAAGATTCACCTGGAGGCAGCCTTTGCTGCAGGGACACCCAGATCTCACCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 72 bp | GCTGACATGAACACAGCAGCCCCTTTCAGTCAGGTTTaGCTTTCAGTTACCCACGATCAACCACCGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ADMNTAAPFSQV*LSVTHDQPPSE Trigger: TTCAGACGGTGGTTGATCGTGGGTAACTGAAAGCAAAACCTGACTGAAAGGGGCTGCTGTGTTCATGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 72 bp | TCTTCTTCACATTGGAACTATTTACTCATGGTATGTTaGTGGGCGTCCCTGCCTTCTGTGGACCAGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSHWNYLLMVC*WASLPSVDQEP Trigger: GGGCTCCTGGTCCACAGAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 72 bp | TTTTTCTGGCAGACCTGGGAGCTGTCTAAGGGGCTCTaGGATGGACTTTGCAGCCATATCACACTCCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FFWQTWELSKGL*DGLCSHITLLR Trigger: TCTTAGGAGTGTGATATGGCTGCAAAGTCCATCCAAGAGCCCCTTAGACAGCTCCCAGGTCTGCCAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660273.1 |
||
| CDS CAA 90 bp | GGAACCACGAGGGCAGCGAGGTTGTCCTGGCAGAGTAAATGTTCGTaGTTTAGCCACCAGTCTGTGGTACTAAAGATGAAGCAACTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTTRAARLSWQSKCS*FSHQSVVLKMKQLE Trigger: TTCTAGTTGCTTCATCTTTAGTACCACAGACTGGTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCTCGTGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS GCA 72 bp | AAGAATGCACGAGACCCTGAGAATGCACCGGGAACATaGTCCCCAAACATATCCTTGCTTGTAAAATCACCC | + |
|
Preference number: 6 (lower is better) Translates to: KNARDPENAPGT*SPNISLLVKSP Trigger: GGGTGATTTTACAAGCAAGGATATGTTTGGGGAGCATGTTCCCGGTGCATTCTCAGGGTCTCGTGCATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | GGAAGTGAGAGCAAACGCATGCTTCCTTTGCATGAATaGCATCTTCCTTCTGAGGCTCTCAAATGGGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSESKRMLPLHE*HLPSEALKWGN Trigger: GTTACCCCATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | GAACACACGGGAGCCATCGCTGTTGCTTGTCCTAAATaGATTCTCTCGCTTGCTAAAATTCAGATACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EHTGAIAVACPK*ILSLAKIQIQG Trigger: CCCCTGTATCTGAATTTTAGCAAGCGAGAGAATGCATTTAGGACAAGCAACAGCGATGGCTCCCGTGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS GCA 72 bp | TCTATTGTGCCTCATCGCTCACGCGTCCACACTACTTaGTCAACACCTGCAAATGTGTGCATTTTTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SIVPHRSRVHTT*STPANVCIFSL Trigger: GAGGCTAAAAATGCACACATTTGCAGGTGTTGAGCAAGTAGTGTGGACGCGTGAGCGATGAGGCACAATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567788.1 |
||
| CDS CAA 72 bp | GGTCCTCAGCTTCCTCAAGTCATTCCCTGTGTGTTTTaGGCTTTGACGCCCTTCTGCAACTGTATTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: GPQLPQVIPCVF*ALTPFCNCIHI Trigger: GATGTGAATACAGTTGCAGAAGGGCGTCAAAGCCAAAAACACACAGGGAATGACTTGAGGAAGCTGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
||
| CDS CAA 72 bp | AACAGAGCAGCCAAGAACACACGGGAGCCATCGCTGTaGCTTGTCCTAAATGCATTCTCTCGCTTGCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: NRAAKNTREPSL*LVLNAFSRLLK Trigger: TTTTAGCAAGCGAGAGAATGCATTTAGGACAAGCAACAGCGATGGCTCCCGTGTGTTCTTGGCTGCTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 72 bp | AGGGCAGCGAGGTTGTCCTGGCAGAGTAAATGTTCGTaGTTTAGCCACCAGTCTGTGGTACTAAAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RAARLSWQSKCS*FSHQSVVLKMK Trigger: CTTCATCTTTAGTACCACAGACTGGTGGCTAAACAACGAACATTTACTCTGCCAGGACAACCTCGCTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CAA 90 bp | ATCAGCGTTGCTGACATGAACACAGCAGCCCCTTTCAGTCAGGTTTaGCTTTCAGTTACCCACGATCAACCACCGTCTGAAAATATGCAG | + |
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Preference number: 6 (lower is better) Translates to: ISVADMNTAAPFSQV*LSVTHDQPPSENMQ Trigger: CTGCATATTTTCAGACGGTGGTTGATCGTGGGTAACTGAAAGCAAAACCTGACTGAAAGGGGCTGCTGTGTTCATGTCAGCAACGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | TTTTCAGGCTTTCTCTCAGGAAGTGAGAGCAAACGCATGCTTCCTTaGCATGAATGCCATCTTCCTTCTGAGGCTCTCAAATGGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: FSGFLSGSESKRMLP*HECHLPSEALKWGN Trigger: GTTACCCCATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCCTGAGAGAAAGCCTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS TCA 72 bp | GGATGTCTTCAATGTCTAAAAGAATGCACGAGACCCTaGGAATGCACCGGGAACATGCTCCCCAAACATATC | + |
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Preference number: 6 (lower is better) Translates to: GCLQCLKECTRP*ECTGNMLPKHI Trigger: GATATGTTTGGGGAGCATGTTCCCGGTGCATTCTCAGGGTCTCGTGCATTCTTTTAGACATTGAAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | GAAAAGAACAAGAACAAGGTGAGATCTGGGTGTCCCTaGAGCAAAGGCTGCCTCCAGGTGAATCTTCATTTA | + |
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Preference number: 6 (lower is better) Translates to: EKNKNKVRSGCP*SKGCLQVNLHL Trigger: TAAATGAAGATTCACCTGGAGGCAGCCTTTGCTGCAGGGACACCCAGATCTCACCTTGTTCTTGTTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | TTGCATGAATGCCATCTTCCTTCTGAGGCTCTCAAATaGGGTAACTCTGCTTCCCTGTTAGTGAAGGACGTT | + |
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Preference number: 6 (lower is better) Translates to: LHECHLPSEALK*GNSASLLVKDV Trigger: AACGTCCTTCACTAACAGGGAAGCAGAGTTACCCCATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | AAACAGTGGGCTCACACTTCTGTGGCATTTTCAGTCTTCTTCACATaGGAACTATTTACTCATGGTATGTTTGTGGGCGTCCCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KQWAHTSVAFSVFFT*ELFTHGMFVGVPAF Trigger: GAAGGCAGGGACGCCCACAAACATACCATGAGTAAATAGTTCCAATGTGAAGAAGACTGAAAATGCCACAGAAGTGTGAGCCCACTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | CTTGGTCCTCAGCTTCCTCAAGTCATTCCCTGTGTGTTTTTGGCTTaGACGCCCTTCTGCAACTGTATTCACATCCTCTTTCTATATGCA | + |
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Preference number: 6 (lower is better) Translates to: LGPQLPQVIPCVFLA*TPFCNCIHILFLYA Trigger: TGCATATAGAAAGAGGATGTGAATACAGTTGCAGAAGGGCGTCAAAGCCAAAAACACACAGGGAATGACTTGAGGAAGCTGAGGACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS GCA 72 bp | TTCTCTCAGGAAGTGAGAGCAAACGCATGCTTCCTTTaGATGAATGCCATCTTCCTTCTGAGGCTCTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FSQEVRANACFL*MNAIFLLRLSN Trigger: ATTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCCTGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | GAAAAGTTTACAAGTAGTTCTGGCTTCAGGCATCGCTaGATCAAGGGGTTCAGAAATTCTCACCAGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: EKFTSSSGFRHR*IKGFRNSHQDS Trigger: TGAGTCCTGGTGAGAATTTCTGAACCCCTTGATCCAGCGATGCCTGAAGCCAGAACTACTTGTAAACTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 72 bp | TTTCTCTCAGGAAGTGAGAGCAAACGCATGCTTCCTTaGCATGAATGCCATCTTCCTTCTGAGGCTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FLSGSESKRMLP*HECHLPSEALK Trigger: TTTGAGAGCCTCAGAAGGAAGATGGCATTCATGCAAAGGAAGCATGCGTTTGCTCTCACTTCCTGAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 72 bp | TGCAACAAGGGCCTGCAGAACACACCTGGCCTACAGTaGTGTCTTGTATGGTCCACTGACTATTTTAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CNKGLQNTPGLQ*CLVWSTDYFKK Trigger: CTTTTTAAAATAGTCAGTGGACCATACAAGACACAACTGTAGGCCAGGTGTGTTCTGCAGGCCCTTGTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CAA 90 bp | AAGGGGTTCAGAAATTCTCACCAGGACTCAGTCTCTCTCAAGCTCTaGTTTCTGCTTTCACAGGTGGTGACTTCATTTTCATTTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: KGFRNSHQDSVSLKL*FLLSQVVTSFSFLG Trigger: GCCTAGAAATGAAAATGAAGTCACCACCTGTGAAAGCAGAAACAAGAGCTTGAGAGAGACTGAGTCCTGGTGAGAATTTCTGAACCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | TCATTTAGAAACAGAGCAGCCAAGAACACACGGGAGCCATCGCTGTaGCTTGTCCTAAATGCATTCTCTCGCTTGCTAAAATTCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: SFRNRAAKNTREPSL*LVLNAFSRLLKFRY Trigger: GTATCTGAATTTTAGCAAGCGAGAGAATGCATTTAGGACAAGCAACAGCGATGGCTCCCGTGTGTTCTTGGCTGCTCTGTTTCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | GTTGCAACAAGGGCCTGCAGAACACACCTGGCCTACAGTTGTGTCTaGTATGGTCCACTGACTATTTTAAAAAGTTACAAGTTGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: VATRACRTHLAYSCV*YGPLTILKSYKLAT Trigger: TGTTGCCAACTTGTAACTTTTTAAAATAGTCAGTGGACCATACAAGACACAACTGTAGGCCAGGTGTGTTCTGCAGGCCCTTGTTGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CAA 72 bp | AGGGCCTGCAGAACACACCTGGCCTACAGTTGTGTCTaGTATGGTCCACTGACTATTTTAAAAAGTTACAAG | + |
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Preference number: 6 (lower is better) Translates to: RACRTHLAYSCV*YGPLTILKSYK Trigger: CTTGTAACTTTTTAAAATAGTCAGTGGACCATACAAGACACAACTGTAGGCCAGGTGTGTTCTGCAGGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS GCA 72 bp | GTCATTCCCTGTGTGTTTTTGGCTTTGACGCCCTTCTaGAACTGTATTCACATCCTCTTTCTATATGCATGT | + |
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Preference number: 6 (lower is better) Translates to: VIPCVFLALTPF*NCIHILFLYAC Trigger: ACATGCATATAGAAAGAGGATGTGAATACAGTTGCAGAAGGGCGTCAAAGCCAAAAACACACAGGGAATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CCA 72 bp | TTCGCAAAATCCTGTGACCTTGGAAGATCATATATCTaGCAAGATAAACTCCTATTCACATCCCAGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: FAKSCDLGRSYI*QDKLLFTSQGV Trigger: CACTCCCTGGGATGTGAATAGGAGTTTATCTTGCCAGATATATGATCTTCCAAGGTCACAGGATTTTGCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CAA 72 bp | AGAAATTCTCACCAGGACTCAGTCTCTCTCAAGCTCTaGTTTCTGCTTTCACAGGTGGTGACTTCATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RNSHQDSVSLKL*FLLSQVVTSFS Trigger: TGAAAATGAAGTCACCACCTGTGAAAGCAGAAACAAGAGCTTGAGAGAGACTGAGTCCTGGTGAGAATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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| CDS CAA 90 bp | TTTAGCCACCAGTCTGTGGTACTAAAGATGAAGCAACTAGAATCCTaGGGACAAAAGGCAGGTCTAAAAGTGTCCTTTGAAAGAACCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSHQSVVLKMKQLES*GQKAGLKVSFERTL Trigger: AAGGGTTCTTTCAAAGGACACTTTTAGACCTGCCTTTTGTCCCAAGGATTCTAGTTGCTTCATCTTTAGTACCACAGACTGGTGGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS CAA 90 bp | ACAAGATGTTGCAACAAGGGCCTGCAGAACACACCTGGCCTACAGTaGTGTCTTGTATGGTCCACTGACTATTTTAAAAAGTTACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: TRCCNKGLQNTPGLQ*CLVWSTDYFKKLQV Trigger: AACTTGTAACTTTTTAAAATAGTCAGTGGACCATACAAGACACAACTGTAGGCCAGGTGTGTTCTGCAGGCCCTTGTTGCAACATCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567788.1 |
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| CDS TCA 72 bp | GGTTTTGCTTTCAGTTACCCACGATCAACCACCGTCTaGAAATATGCAGTGGATCACTCCAGAAATAAATCA | + |
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Preference number: 6 (lower is better) Translates to: GFAFSYPRSTTV*KYAVDHSRNKS Trigger: TGATTTATTTCTGGAGTGATCCACTGCATATTTTCAGACGGTGGTTGATCGTGGGTAACTGAAAGCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291374.11 ENST00000567788.1 ENST00000660273.1 |
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