Pregenerated sensors for LINC02417 (Homo sapiens)
Ensembl gene IDs: ENSG00000257048Ensembl transcript IDs: ENST00000542449.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTCATGCTCCCCAGACCCGGCAGGCCTCCCTGTGGCGTTCACTCTaGCAGCAGGCCCGAATGGCTAGGTTGTCTCAAGCCACCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: AHAPQTRQASLWRSL*QQARMARLSQATCA Trigger: GGCACAGGTGGCTTGAGACAACCTAGCCATTCGGGCCTGCTGCCAGAGTGAACGCCACAGGGAGGCCTGCCGGGTCTGGGGAGCATGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542449.1 |
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| CDS CCA 90 bp | TCTCTTGAAACAGCTTCCCTTTCTCGGTGCCGCAGGATCTCAGGTTaGATTTCTAGGATACAGACTCTGCATGGAGATGGAGATCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLETASLSRCRRISG*ISRIQTLHGDGDQP Trigger: AGGCTGATCTCCATCTCCATGCAGAGTCTGTATCCTAGAAATCCAACCTGAGATCCTGCGGCACCGAGAAAGGGAAGCTGTTTCAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542449.1 |
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| CDS CCA 72 bp | CCCCAGACCCGGCAGGCCTCCCTGTGGCGTTCACTCTaGCAGCAGGCCCGAATGGCTAGGTTGTCTCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQTRQASLWRSL*QQARMARLSQA Trigger: GGCTTGAGACAACCTAGCCATTCGGGCCTGCTGCCAGAGTGAACGCCACAGGGAGGCCTGCCGGGTCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542449.1 |
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| CDS CAA 72 bp | GAATGGCTAGGTTGTCTCAAGCCACCTGTGCCCAGGTaGCTGAGCTGTTCCAGGCATTCCAGGAGGTCTACG | + |
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Preference number: 6 (lower is better) Translates to: EWLGCLKPPVPR*LSCSRHSRRST Trigger: CGTAGACCTCCTGGAATGCCTGGAACAGCTCAGCAACCTGGGCACAGGTGGCTTGAGACAACCTAGCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542449.1 |
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| CDS CAA 72 bp | GTAGCAGAAATCTCCAGCTTTATCTCACCGACAGCGTaGCTCTCCTCTGCCTCCTGGCTTTCGAAGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: VAEISSFISPTA*LSSASWLSKIH Trigger: ATGGATCTTCGAAAGCCAGGAGGCAGAGGAGAGCAACGCTGTCGGTGAGATAAAGCTGGAGATTTCTGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542449.1 |
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