Pregenerated sensors for LINC02416 (Homo sapiens)

Ensembl gene IDs: ENSG00000257924

Ensembl transcript IDs: ENST00000550019.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	AGGTGTCCATTTGGAATTATGTCCTTCCCTTCTGTCTaGCCAGTTCAAGTTGGGTCTCATACCTGCCCCTGG	+
Preference number: 6 (lower is better) Translates to: RCPFGIMSFPSV*PVQVGSHTCPW Trigger: CCAGGGGCAGGTATGAGACCCAACTTGAACTGGTCAGACAGAAGGGAAGGACATAATTCCAAATGGACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CAA 90 bp	CTCGTTTCCTTTTCCTCACTGGTAGGAGAGAGAACAGGTGTCCATTaGGAATTATGTCCTTCCCTTCTGTCTGACCAGTTCAAGTTGGGT	+
Preference number: 6 (lower is better) Translates to: LVSFSSLVGERTGVH*ELCPSLLSDQFKLG Trigger: ACCCAACTTGAACTGGTCAGACAGAAGGGAAGGACATAATTCCAAATGGACACCTGTTCTCTCTCCTACCAGTGAGGAAAAGGAAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CCA 72 bp	AATTATGTCCTTCCCTTCTGTCTGACCAGTTCAAGTTaGGTCTCATACCTGCCCCTGGACAAATTAATCATC	+
Preference number: 6 (lower is better) Translates to: NYVLPFCLTSSS*VSYLPLDKLII Trigger: GATGATTAATTTGTCCAGGGGCAGGTATGAGACCCAACTTGAACTGGTCAGACAGAAGGGAAGGACATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CAA 72 bp	GAATTATGTCCTTCCCTTCTGTCTGACCAGTTCAAGTaGGGTCTCATACCTGCCCCTGGACAAATTAATCAT	+
Preference number: 6 (lower is better) Translates to: ELCPSLLSDQFK*GLIPAPGQINH Trigger: ATGATTAATTTGTCCAGGGGCAGGTATGAGACCCAACTTGAACTGGTCAGACAGAAGGGAAGGACATAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CAA 90 bp	GTCCATTTGGAATTATGTCCTTCCCTTCTGTCTGACCAGTTCAAGTaGGGTCTCATACCTGCCCCTGGACAAATTAATCATCATCATCAA	+
Preference number: 6 (lower is better) Translates to: VHLELCPSLLSDQFK*GLIPAPGQINHHHQ Trigger: TTGATGATGATGATTAATTTGTCCAGGGGCAGGTATGAGACCCAACTTGAACTGGTCAGACAGAAGGGAAGGACATAATTCCAAATGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CAA 90 bp	TTTTATAGGATGAGATGTTGCCTGATTCAATGTACAAGGCGCTTCTaGATGTGTCCTCCGGCCACCTCTCCAGATAATTTTCTGTCTTTT	+
Preference number: 6 (lower is better) Translates to: FYRMRCCLIQCTRRF*MCPPATSPDNFLSF Trigger: AAAAGACAGAAAATTATCTGGAGAGGTGGCCGGAGGACACATCAAGAAGCGCCTTGTACATTGAATCAGGCAACATCTCATCCTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CCA 72 bp	TTAATCATCATCATCAAAGGAATGGCATCTGGTGATTaGTTTAAAATATCAGCATCCACTTCTGGAGCTGGG	+
Preference number: 6 (lower is better) Translates to: LIIIIKGMASGD*FKISASTSGAG Trigger: CCCAGCTCCAGAAGTGGATGCTGATATTTTAAACCAATCACCAGATGCCATTCCTTTGATGATGATGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550019.1
CDS CAA 72 bp	CATGATTCGTGTGAACACCTGAACAAAACCGGATCCTaGAAACAAAGCATCTGCTTTTTGTTCTCTGTTTCT	+
Preference number: 6 (lower is better) Translates to: HDSCEHLNKTGS*KQSICFLFSVS Trigger: AGAAACAGAGAACAAAAAGCAGATGCTTTGTTTCAAGGATCCGGTTTTGTTCAGGTGTTCACACGAATCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000550019.1

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