RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02414 (Homo sapiens)

Ensembl gene IDs: ENSG00000256424

Ensembl transcript IDs: ENST00000537280.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGAGCCTCCTGGGAGGGCGTCCTGGACACATCCCTCAGCCGTCCCTaGTATGGGCACCAGCTGCTTCCGTGGGTGGGTGCTGGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: RASWEGVLDTSLSRP*YGHQLLPWVGAGRK
Trigger: TTTCCTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCAGGAGGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 90 bp CTCTGTGCCAGCCAGGCCCGGGGGCATCAATCTCACTCCATCCCCTaGGGCTCTGCCAGTTGGTCAAGGCCAACGTCCACCCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LCASQARGHQSHSIP*GSASWSRPTSTLLG
Trigger: ACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGCCCCCGGGCCTGGCTGGCACAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS TCA 90 bp TTTGTCTTCCCCAGGCTCTGGCCATGTTTCCCCCTAGAGGAGGCCTaGGAGTCCCAGAGGCTGTGGGAGCCCAGAGTCCTCCAGAATCCT +
Preference number: 5 (lower is better)
Translates to: FVFPRLWPCFPLEEA*ESQRLWEPRVLQNP
Trigger: AGGATTCTGGAGGACTCTGGGCTCCCACAGCCTCTGGGACTCTCAGGCCTCCTCTAGGGGGAAACATGGCCAGAGCCTGGGGAAGACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS GCA 90 bp GGGGACCATCAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTGCTaGCTTCTCCCAACATCTCCTCGTGGAGCCGGGACTCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: GDHQEWCSLLLLNVC*LLPTSPRGAGTQPL
Trigger: CAGTGGCTGAGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTGATGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 90 bp CAGACCTTGGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTCCAGTaGGGAGGACCTAGGATGTCTGTGCTGATGGATGAGCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: QTLGEVVPSPPQSLQ*GGPRMSVLMDELRS
Trigger: GCTCCTCAGCTCATCCATCAGCACAGACATCCTAGGTCCTCCCCACTGGAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS TCA 90 bp GGAGGAACCGGTAACCTGGCTTCTACCCAGTGGTGGAAAGAATCGTaGTCCAGGCAGATGTGGGTTCCTTCTCCACAGCTCACTGGCCGT +
Preference number: 5 (lower is better)
Translates to: GGTGNLASTQWWKES*SRQMWVPSPQLTGR
Trigger: ACGGCCAGTGAGCTGTGGAGAAGGAACCCACATCTGCCTGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 90 bp CTCAGCCACTGGCCCATGTTTCTGCACCTGGAGGAACCGGTAACCTaGCTTCTACCCAGTGGTGGAAAGAATCGTGATCCAGGCAGATGT +
Preference number: 5 (lower is better)
Translates to: LSHWPMFLHLEEPVT*LLPSGGKNRDPGRC
Trigger: ACATCTGCCTGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCCAGGTGCAGAAACATGGGCCAGTGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 90 bp TGTGGGTTCCTTCTCCACAGCTCACTGGCCGTGATCTTGGCTGAATaGTTGAACACTGTGGAGACCAATGTCCCTCATCTGCACACTGGC +
Preference number: 5 (lower is better)
Translates to: CGFLLHSSLAVILAE*LNTVETNVPHLHTG
Trigger: GCCAGTGTGCAGATGAGGGACATTGGTCTCCACAGTGTTCAACCATTCAGCCAAGATCACGGCCAGTGAGCTGTGGAGAAGGAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 90 bp AGGAAACGGGGAGCAGTCTCCAGTCTGGAGGTGCTGCTTGTAAACTaGAGGTTTGTCAAAGCCTCTCCACCTCCCGCTCTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: RKRGAVSSLEVLLVN*RFVKASPPPALMSS
Trigger: AGAAGACATCAGAGCGGGAGGTGGAGAGGCTTTGACAAACCTCCAGTTTACAAGCAGCACCTCCAGACTGGAGACTGCTCCCCGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp GGGCGTCCTGGACACATCCCTCAGCCGTCCCTGCTATaGGCACCAGCTGCTTCCGTGGGTGGGTGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GRPGHIPQPSLL*APAASVGGCWE
Trigger: CTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS GCA 72 bp TGGGAGGGCGTCCTGGACACATCCCTCAGCCGTCCCTaGTATGGGCACCAGCTGCTTCCGTGGGTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: WEGVLDTSLSRP*YGHQLLPWVGA
Trigger: AGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp AGGAGCCCAAACACCGAGCCTCCTGGGAGGGCGTCCTaGACACATCCCTCAGCCGTCCCTGCTATGGGCACC +
Preference number: 6 (lower is better)
Translates to: RSPNTEPPGRAS*THPSAVPAMGT
Trigger: GGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCAGGAGGCTCGGTGTTTGGGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp AGCCAGGCCCGGGGGCATCAATCTCACTCCATCCCCTaGGGCTCTGCCAGTTGGTCAAGGCCAACGTCCACC +
Preference number: 6 (lower is better)
Translates to: SQARGHQSHSIP*GSASWSRPTST
Trigger: GGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGCCCCCGGGCCTGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS GCA 72 bp TCCCTGCTATGGGCACCAGCTGCTTCCGTGGGTGGGTaGTGGGAGGAAACGGGGAGCAGTCTCCAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: SLLWAPAASVGG*WEETGSSLQSG
Trigger: TCCAGACTGGAGACTGCTCCCCGTTTCCTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp GCTCTGCCAGTTGGTCAAGGCCAACGTCCACCCTTCTaGGTCATGTCCAGGCTTTCACCTTCACCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: ALPVGQGQRPPF*VMSRLSPSPPP
Trigger: CGGCGGGGGTGAAGGTGAAAGCCTGGACATGACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp CCTCAATGTGTGCTGCCTTCTCCCAACATCTCCTCGTaGAGCCGGGACTCAGCCACTGGCCCATGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PQCVLPSPNISS*SRDSATGPCFC
Trigger: GCAGAAACATGGGCCAGTGGCTGAGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS GCA 72 bp CAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTGCTaGCTTCTCCCAACATCTCCTCGTGGAGCCGGGACT +
Preference number: 6 (lower is better)
Translates to: QEWCSLLLLNVC*LLPTSPRGAGT
Trigger: AGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS GCA 72 bp CATCAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTaGTGCCTTCTCCCAACATCTCCTCGTGGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: HQEWCSLLLLNV*CLLPTSPRGAG
Trigger: CCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CAA 72 bp GCATCAATCTCACTCCATCCCCTGGGGCTCTGCCAGTaGGTCAAGGCCAACGTCCACCCTTCTGGGTCATGT +
Preference number: 6 (lower is better)
Translates to: ASISLHPLGLCQ*VKANVHPSGSC
Trigger: ACATGACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp GGAGCAGTCTCCAGTCTGGAGGTGCTGCTTGTAAACTaGAGGTTTGTCAAAGCCTCTCCACCTCCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: GAVSSLEVLLVN*RFVKASPPPAL
Trigger: CAGAGCGGGAGGTGGAGAGGCTTTGACAAACCTCCAGTTTACAAGCAGCACCTCCAGACTGGAGACTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp CTCACCTCACCTGTGGAAGCCTTTTCATTCAGACCTTaGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LTSPVEAFSFRP*VKWSLLHPSPS
Trigger: GGAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTGAATGAAAAGGCTTCCACAGGTGAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CAA 72 bp CCTCACCTCACCTGTGGAAGCCTTTTCATTCAGACCTaGGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: PHLTCGSLFIQT*GEVVPSPPQSL
Trigger: GAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTGAATGAAAAGGCTTCCACAGGTGAGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CAA 90 bp GGGTTCCTTCTCCACAGCTCACTGGCCGTGATCTTGGCTGAATGGTaGAACACTGTGGAGACCAATGTCCCTCATCTGCACACTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GFLLHSSLAVILAEW*NTVETNVPHLHTGL
Trigger: AAGGCCAGTGTGCAGATGAGGGACATTGGTCTCCACAGTGTTCAACCATTCAGCCAAGATCACGGCCAGTGAGCTGTGGAGAAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2
CDS CCA 72 bp TGGCCCATGTTTCTGCACCTGGAGGAACCGGTAACCTaGCTTCTACCCAGTGGTGGAAAGAATCGTGATCCA +
Preference number: 6 (lower is better)
Translates to: WPMFLHLEEPVT*LLPSGGKNRDP
Trigger: TGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCCAGGTGCAGAAACATGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537280.2