Pregenerated sensors for LINC02414 (Homo sapiens)
Ensembl gene IDs: ENSG00000256424Ensembl transcript IDs: ENST00000537280.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CGAGCCTCCTGGGAGGGCGTCCTGGACACATCCCTCAGCCGTCCCTaGTATGGGCACCAGCTGCTTCCGTGGGTGGGTGCTGGGAGGAAA | + |
Preference number: 5 (lower is better) Translates to: RASWEGVLDTSLSRP*YGHQLLPWVGAGRK Trigger: TTTCCTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCAGGAGGCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 90 bp | CTCTGTGCCAGCCAGGCCCGGGGGCATCAATCTCACTCCATCCCCTaGGGCTCTGCCAGTTGGTCAAGGCCAACGTCCACCCTTCTGGGT | + |
Preference number: 5 (lower is better) Translates to: LCASQARGHQSHSIP*GSASWSRPTSTLLG Trigger: ACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGCCCCCGGGCCTGGCTGGCACAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS TCA 90 bp | TTTGTCTTCCCCAGGCTCTGGCCATGTTTCCCCCTAGAGGAGGCCTaGGAGTCCCAGAGGCTGTGGGAGCCCAGAGTCCTCCAGAATCCT | + |
Preference number: 5 (lower is better) Translates to: FVFPRLWPCFPLEEA*ESQRLWEPRVLQNP Trigger: AGGATTCTGGAGGACTCTGGGCTCCCACAGCCTCTGGGACTCTCAGGCCTCCTCTAGGGGGAAACATGGCCAGAGCCTGGGGAAGACAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS GCA 90 bp | GGGGACCATCAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTGCTaGCTTCTCCCAACATCTCCTCGTGGAGCCGGGACTCAGCCACTG | + |
Preference number: 5 (lower is better) Translates to: GDHQEWCSLLLLNVC*LLPTSPRGAGTQPL Trigger: CAGTGGCTGAGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTGATGGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 90 bp | CAGACCTTGGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTCCAGTaGGGAGGACCTAGGATGTCTGTGCTGATGGATGAGCTGAGGAGC | + |
Preference number: 5 (lower is better) Translates to: QTLGEVVPSPPQSLQ*GGPRMSVLMDELRS Trigger: GCTCCTCAGCTCATCCATCAGCACAGACATCCTAGGTCCTCCCCACTGGAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS TCA 90 bp | GGAGGAACCGGTAACCTGGCTTCTACCCAGTGGTGGAAAGAATCGTaGTCCAGGCAGATGTGGGTTCCTTCTCCACAGCTCACTGGCCGT | + |
Preference number: 5 (lower is better) Translates to: GGTGNLASTQWWKES*SRQMWVPSPQLTGR Trigger: ACGGCCAGTGAGCTGTGGAGAAGGAACCCACATCTGCCTGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 90 bp | CTCAGCCACTGGCCCATGTTTCTGCACCTGGAGGAACCGGTAACCTaGCTTCTACCCAGTGGTGGAAAGAATCGTGATCCAGGCAGATGT | + |
Preference number: 5 (lower is better) Translates to: LSHWPMFLHLEEPVT*LLPSGGKNRDPGRC Trigger: ACATCTGCCTGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCCAGGTGCAGAAACATGGGCCAGTGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 90 bp | TGTGGGTTCCTTCTCCACAGCTCACTGGCCGTGATCTTGGCTGAATaGTTGAACACTGTGGAGACCAATGTCCCTCATCTGCACACTGGC | + |
Preference number: 5 (lower is better) Translates to: CGFLLHSSLAVILAE*LNTVETNVPHLHTG Trigger: GCCAGTGTGCAGATGAGGGACATTGGTCTCCACAGTGTTCAACCATTCAGCCAAGATCACGGCCAGTGAGCTGTGGAGAAGGAACCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 90 bp | AGGAAACGGGGAGCAGTCTCCAGTCTGGAGGTGCTGCTTGTAAACTaGAGGTTTGTCAAAGCCTCTCCACCTCCCGCTCTGATGTCTTCT | + |
Preference number: 5 (lower is better) Translates to: RKRGAVSSLEVLLVN*RFVKASPPPALMSS Trigger: AGAAGACATCAGAGCGGGAGGTGGAGAGGCTTTGACAAACCTCCAGTTTACAAGCAGCACCTCCAGACTGGAGACTGCTCCCCGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | GGGCGTCCTGGACACATCCCTCAGCCGTCCCTGCTATaGGCACCAGCTGCTTCCGTGGGTGGGTGCTGGGAG | + |
Preference number: 6 (lower is better) Translates to: GRPGHIPQPSLL*APAASVGGCWE Trigger: CTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS GCA 72 bp | TGGGAGGGCGTCCTGGACACATCCCTCAGCCGTCCCTaGTATGGGCACCAGCTGCTTCCGTGGGTGGGTGCT | + |
Preference number: 6 (lower is better) Translates to: WEGVLDTSLSRP*YGHQLLPWVGA Trigger: AGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | AGGAGCCCAAACACCGAGCCTCCTGGGAGGGCGTCCTaGACACATCCCTCAGCCGTCCCTGCTATGGGCACC | + |
Preference number: 6 (lower is better) Translates to: RSPNTEPPGRAS*THPSAVPAMGT Trigger: GGTGCCCATAGCAGGGACGGCTGAGGGATGTGTCCAGGACGCCCTCCCAGGAGGCTCGGTGTTTGGGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | AGCCAGGCCCGGGGGCATCAATCTCACTCCATCCCCTaGGGCTCTGCCAGTTGGTCAAGGCCAACGTCCACC | + |
Preference number: 6 (lower is better) Translates to: SQARGHQSHSIP*GSASWSRPTST Trigger: GGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGCCCCCGGGCCTGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS GCA 72 bp | TCCCTGCTATGGGCACCAGCTGCTTCCGTGGGTGGGTaGTGGGAGGAAACGGGGAGCAGTCTCCAGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: SLLWAPAASVGG*WEETGSSLQSG Trigger: TCCAGACTGGAGACTGCTCCCCGTTTCCTCCCAGCACCCACCCACGGAAGCAGCTGGTGCCCATAGCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | GCTCTGCCAGTTGGTCAAGGCCAACGTCCACCCTTCTaGGTCATGTCCAGGCTTTCACCTTCACCCCCGCCG | + |
Preference number: 6 (lower is better) Translates to: ALPVGQGQRPPF*VMSRLSPSPPP Trigger: CGGCGGGGGTGAAGGTGAAAGCCTGGACATGACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | CCTCAATGTGTGCTGCCTTCTCCCAACATCTCCTCGTaGAGCCGGGACTCAGCCACTGGCCCATGTTTCTGC | + |
Preference number: 6 (lower is better) Translates to: PQCVLPSPNISS*SRDSATGPCFC Trigger: GCAGAAACATGGGCCAGTGGCTGAGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS GCA 72 bp | CAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTGCTaGCTTCTCCCAACATCTCCTCGTGGAGCCGGGACT | + |
Preference number: 6 (lower is better) Translates to: QEWCSLLLLNVC*LLPTSPRGAGT Trigger: AGTCCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS GCA 72 bp | CATCAGGAGTGGTGCTCCTTGCTTCTCCTCAATGTGTaGTGCCTTCTCCCAACATCTCCTCGTGGAGCCGGG | + |
Preference number: 6 (lower is better) Translates to: HQEWCSLLLLNV*CLLPTSPRGAG Trigger: CCCGGCTCCACGAGGAGATGTTGGGAGAAGGCAGCACACATTGAGGAGAAGCAAGGAGCACCACTCCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CAA 72 bp | GCATCAATCTCACTCCATCCCCTGGGGCTCTGCCAGTaGGTCAAGGCCAACGTCCACCCTTCTGGGTCATGT | + |
Preference number: 6 (lower is better) Translates to: ASISLHPLGLCQ*VKANVHPSGSC Trigger: ACATGACCCAGAAGGGTGGACGTTGGCCTTGACCAACTGGCAGAGCCCCAGGGGATGGAGTGAGATTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | GGAGCAGTCTCCAGTCTGGAGGTGCTGCTTGTAAACTaGAGGTTTGTCAAAGCCTCTCCACCTCCCGCTCTG | + |
Preference number: 6 (lower is better) Translates to: GAVSSLEVLLVN*RFVKASPPPAL Trigger: CAGAGCGGGAGGTGGAGAGGCTTTGACAAACCTCCAGTTTACAAGCAGCACCTCCAGACTGGAGACTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | CTCACCTCACCTGTGGAAGCCTTTTCATTCAGACCTTaGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: LTSPVEAFSFRP*VKWSLLHPSPS Trigger: GGAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTGAATGAAAAGGCTTCCACAGGTGAGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CAA 72 bp | CCTCACCTCACCTGTGGAAGCCTTTTCATTCAGACCTaGGGTGAAGTGGTCCCTTCTCCACCCCAGTCCCTC | + |
Preference number: 6 (lower is better) Translates to: PHLTCGSLFIQT*GEVVPSPPQSL Trigger: GAGGGACTGGGGTGGAGAAGGGACCACTTCACCCAAGGTCTGAATGAAAAGGCTTCCACAGGTGAGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CAA 90 bp | GGGTTCCTTCTCCACAGCTCACTGGCCGTGATCTTGGCTGAATGGTaGAACACTGTGGAGACCAATGTCCCTCATCTGCACACTGGCCTT | + |
Preference number: 6 (lower is better) Translates to: GFLLHSSLAVILAEW*NTVETNVPHLHTGL Trigger: AAGGCCAGTGTGCAGATGAGGGACATTGGTCTCCACAGTGTTCAACCATTCAGCCAAGATCACGGCCAGTGAGCTGTGGAGAAGGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |
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CDS CCA 72 bp | TGGCCCATGTTTCTGCACCTGGAGGAACCGGTAACCTaGCTTCTACCCAGTGGTGGAAAGAATCGTGATCCA | + |
Preference number: 6 (lower is better) Translates to: WPMFLHLEEPVT*LLPSGGKNRDP Trigger: TGGATCACGATTCTTTCCACCACTGGGTAGAAGCCAGGTTACCGGTTCCTCCAGGTGCAGAAACATGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537280.2 |