Pregenerated sensors for LINC02413 (Homo sapiens)

Ensembl gene IDs: ENSG00000257345

Ensembl transcript IDs: ENST00000549914.1, ENST00000552353.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTACGTGCTGATGATTCTGATTCTGGCCCTGCAGTATCGCTTGCATaGACCTCCTCCTCCCTGTGCTCACTGTGGTCCCAGCTAGTCGGG	+
Preference number: 5 (lower is better) Translates to: LRADDSDSGPAVSLA*TSSSLCSLWSQLVG Trigger: CCCGACTAGCTGGGACCACAGTGAGCACAGGGAGGAGGAGGTGCATGCAAGCGATACTGCAGGGCCAGAATCAGAATCATCAGCACGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS CCA 90 bp	CTTACTAAGATGCAAATGACTGGCAAGGCGTGGATGTGTTCCTCCTaGGCTGTGGGAAGCCTGGTGTACAGGAGCCTAGTGTTCCTCCCG	+
Preference number: 5 (lower is better) Translates to: LTKMQMTGKAWMCSS*AVGSLVYRSLVFLP Trigger: CGGGAGGAACACTAGGCTCCTGTACACCAGGCTTCCCACAGCCCAGGAGGAACACATCCACGCCTTGCCAGTCATTTGCATCTTAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS GCA 90 bp	CTACGTGCTGATGATTCTGATTCTGGCCCTGCAGTATCGCTTGCATaGACCTCCTCCTCCCTGTGCTCACTGCTGGAGAAAAGAGAACCT	+
Preference number: 5 (lower is better) Translates to: LRADDSDSGPAVSLA*TSSSLCSLLEKREP Trigger: AGGTTCTCTTTTCTCCAGCAGTGAGCACAGGGAGGAGGAGGTGCATGCAAGCGATACTGCAGGGCCAGAATCAGAATCATCAGCACGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549914.1
CDS GCA 90 bp	AGGAAGCCTTCTCTGATGCCTCTGACTGGGAGAGGTACCCCTCTTTaGATAGCCTGCTCCACACATCATGTTAGAGTTCCTGGTTCCTCT	+
Preference number: 5 (lower is better) Translates to: RKPSLMPLTGRGTPL*IACSTHHVRVPGSS Trigger: AGAGGAACCAGGAACTCTAACATGATGTGTGGAGCAGGCTATGCAAAGAGGGGTACCTCTCCCAGTCAGAGGCATCAGAGAAGGCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000549914.1 ENST00000552353.2
CDS GCA 90 bp	GATTCTGGCCCTGCAGTATCGCTTGCATGCACCTCCTCCTCCCTGTaGTCACTGCTGGAGAAAAGAGAACCTTGGCTGATGATTTATGGA	+
Preference number: 5 (lower is better) Translates to: DSGPAVSLACTSSSL*SLLEKREPWLMIYG Trigger: TCCATAAATCATCAGCCAAGGTTCTCTTTTCTCCAGCAGTGAGCACAGGGAGGAGGAGGTGCATGCAAGCGATACTGCAGGGCCAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549914.1
CDS GCA 90 bp	GGCACACACACCTCAGCATGGCTCTGCACTGTCTGCTCACCTACATaGATAGAAGAACTCTTCTGGAATAGAAGACCCTTTATTTCTTTG	+
Preference number: 5 (lower is better) Translates to: GTHTSAWLCTVCSPT*IEELFWNRRPFISL Trigger: CAAAGAAATAAAGGGTCTTCTATTCCAGAAGAGTTCTTCTATGCATGTAGGTGAGCAGACAGTGCAGAGCCATGCTGAGGTGTGTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS GCA 72 bp	GATGATTCTGATTCTGGCCCTGCAGTATCGCTTGCATaGACCTCCTCCTCCCTGTGCTCACTGTGGTCCCAG	+
Preference number: 6 (lower is better) Translates to: DDSDSGPAVSLA*TSSSLCSLWSQ Trigger: CTGGGACCACAGTGAGCACAGGGAGGAGGAGGTGCATGCAAGCGATACTGCAGGGCCAGAATCAGAATCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS CCA 72 bp	ATGCAAATGACTGGCAAGGCGTGGATGTGTTCCTCCTaGGCTGTGGGAAGCCTGGTGTACAGGAGCCTAGTG	+
Preference number: 6 (lower is better) Translates to: MQMTGKAWMCSS*AVGSLVYRSLV Trigger: CACTAGGCTCCTGTACACCAGGCTTCCCACAGCCCAGGAGGAACACATCCACGCCTTGCCAGTCATTTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS GCA 72 bp	GATGATTCTGATTCTGGCCCTGCAGTATCGCTTGCATaGACCTCCTCCTCCCTGTGCTCACTGCTGGAGAAA	+
Preference number: 6 (lower is better) Translates to: DDSDSGPAVSLA*TSSSLCSLLEK Trigger: TTTCTCCAGCAGTGAGCACAGGGAGGAGGAGGTGCATGCAAGCGATACTGCAGGGCCAGAATCAGAATCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549914.1
CDS GCA 72 bp	TCTCTGATGCCTCTGACTGGGAGAGGTACCCCTCTTTaGATAGCCTGCTCCACACATCATGTTAGAGTTCCT	+
Preference number: 6 (lower is better) Translates to: SLMPLTGRGTPL*IACSTHHVRVP Trigger: AGGAACTCTAACATGATGTGTGGAGCAGGCTATGCAAAGAGGGGTACCTCTCCCAGTCAGAGGCATCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000549914.1 ENST00000552353.2
CDS CCA 72 bp	TTTAGTCTTACTAAGATGCAAATGACTGGCAAGGCGTaGATGTGTTCCTCCTGGGCTGTGGGAAGCCTGGTG	+
Preference number: 6 (lower is better) Translates to: FSLTKMQMTGKA*MCSSWAVGSLV Trigger: CACCAGGCTTCCCACAGCCCAGGAGGAACACATCCACGCCTTGCCAGTCATTTGCATCTTAGTAAGACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS GCA 72 bp	ACCTCAGCATGGCTCTGCACTGTCTGCTCACCTACATaGATAGAAGAACTCTTCTGGAATAGAAGACCCTTT	+
Preference number: 6 (lower is better) Translates to: TSAWLCTVCSPT*IEELFWNRRPF Trigger: AAAGGGTCTTCTATTCCAGAAGAGTTCTTCTATGCATGTAGGTGAGCAGACAGTGCAGAGCCATGCTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2
CDS CAA 72 bp	CCTGCACCTTCTCTAGTTAGCGCTGTAAGAACTTGGTaGCTCAGGTGGAAGGCATATAGATTGTATTGTATT	+
Preference number: 6 (lower is better) Translates to: PAPSLVSAVRTW*LRWKAYRLYCI Trigger: AATACAATACAATCTATATGCCTTCCACCTGAGCAACCAAGTTCTTACAGCGCTAACTAGAGAAGGTGCAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549914.1
CDS TCA 72 bp	GAACTCTTCTGGAATAGAAGACCCTTTATTTCTTTGTaGAAACAGCTTGTGCTGCTGAGGCAAATAACAGAA	+
Preference number: 6 (lower is better) Translates to: ELFWNRRPFISL*KQLVLLRQITE Trigger: TTCTGTTATTTGCCTCAGCAGCACAAGCTGTTTTCACAAAGAAATAAAGGGTCTTCTATTCCAGAAGAGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552353.2