Pregenerated sensors for LINC02412 (Homo sapiens)
Ensembl gene IDs: ENSG00000258171Ensembl transcript IDs: ENST00000552584.2, ENST00000653145.1, ENST00000655403.1, ENST00000665146.1, ENST00000665173.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCCCTGCCGAAGCTGGCACGCTGCATGGGAGCTATCCTTAAATaGCACTCAGAACACTCTCACAGCCTGCAGCCTTCAGAAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: EALPKLARCMGAILK*HSEHSHSLQPSEGE Trigger: CTCTCCTTCTGAAGGCTGCAGGCTGTGAGAGTGTTCTGAGTGGCATTTAAGGATAGCTCCCATGCAGCGTGCCAGCTTCGGCAGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS TCA 90 bp | ACAGCCTGCAGCCTTCAGAAGGAGAGTGTCGCATGGTCTAGCTGCTaGGTGACCGCTGATCAACAGCTGGCTTCACCTTGCATCCTGACT | + |
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Preference number: 5 (lower is better) Translates to: TACSLQKESVAWSSC*VTADQQLASPCILT Trigger: AGTCAGGATGCAAGGTGAAGCCAGCTGTTGATCAGCGGTCACTCAGCAGCTAGACCATGCGACACTCTCCTTCTGAAGGCTGCAGGCTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CCA 90 bp | TTTAGGGCTTACCATAGGAGGCCCTGCCGAAGCTGGCACGCTGCATaGGAGCTATCCTTAAATGCCACTCAGAACACTCTCACAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: FRAYHRRPCRSWHAA*ELSLNATQNTLTAC Trigger: GCAGGCTGTGAGAGTGTTCTGAGTGGCATTTAAGGATAGCTCCCATGCAGCGTGCCAGCTTCGGCAGGGCCTCCTATGGTAAGCCCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CCA 90 bp | GGGATGGCTGTCTTTAGAGAGGAGCTATGTGGCCTTGAGAAAAGCTaGGTAGATGGACGGCCTGTCCTTGGAAATGGGCTCTCTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: GMAVFREELCGLEKS*VDGRPVLGNGLSAR Trigger: CCTTGCAGAGAGCCCATTTCCAAGGACAGGCCGTCCATCTACCCAGCTTTTCTCAAGGCCACATAGCTCCTCTCTAAAGACAGCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS TCA 90 bp | GCTCTTTTACATGTGCGCTGTGACAGGCTTCTTGCTTCTGTCACATaGCTCCCAGCTGGAGAGGATGATGAGGGGAGAGCCCAAGCTACA | + |
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Preference number: 5 (lower is better) Translates to: ALLHVRCDRLLASVT*LPAGEDDEGRAQAT Trigger: TGTAGCTTGGGCTCTCCCCTCATCATCCTCTCCAGCTGGGAGTCATGTGACAGAAGCAAGAAGCCTGTCACAGCGCACATGTAAAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS TCA 90 bp | GATAAGACGTGTGTGTCTGGAGTTTGCTCTTTTACATGTGCGCTGTaGCAGGCTTCTTGCTTCTGTCACATGACTCCCAGCTGGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: DKTCVSGVCSFTCAL*QASCFCHMTPSWRG Trigger: TCCTCTCCAGCTGGGAGTCATGTGACAGAAGCAAGAAGCCTGTCACAGCGCACATGTAAAAGAGCAAACTCCAGACACACACGTCTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS TCA 90 bp | TGGTTCCCTAGATGTCTCAGAATCAGTGTGTTTGAACCTAGCTCATaGTGCTCCCACCCCCACAAACTATGCCTGCTCCTGAGATCTTGT | + |
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Preference number: 5 (lower is better) Translates to: WFPRCLRISVFEPSS*CSHPHKLCLLLRSC Trigger: ACAAGATCTCAGGAGCAGGCATAGTTTGTGGGGGTGGGAGCATCATGAGCTAGGTTCAAACACACTGATTCTGAGACATCTAGGGAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655403.1 |
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| CDS CCA 90 bp | TGTTTCGTCATTGTCTCCCCATCACAGCTGTACCAAGGCCACTTCTaGTTGCCTTCTTGCTTCTCCAACTGCTTTTCTCTGGTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CFVIVSPSQLYQGHF*LPSCFSNCFSLVSS Trigger: GGAAGAAACCAGAGAAAAGCAGTTGGAGAAGCAAGAAGGCAACCAGAAGTGGCCTTGGTACAGCTGTGATGGGGAGACAATGACGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CCA 90 bp | TCCAGATTCTTGATAACATTTACCAGCATTCAGGCTGGTCAGCCTTaGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTGGTTTGGATAC | + |
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Preference number: 5 (lower is better) Translates to: SRFLITFTSIQAGQP*FWLFSLSFPGWFGY Trigger: GTATCCAAACCAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGGTAAATGTTATCAAGAATCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS CCA 90 bp | AGAGAAATCTTGATAACATTTACCAGCATTCAGGCTGGTCAGCCTTaGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTGGTTTGGATAC | + |
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Preference number: 5 (lower is better) Translates to: REILITFTSIQAGQP*FWLFSLSFPGWFGY Trigger: GTATCCAAACCAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGGTAAATGTTATCAAGATTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653145.1 ENST00000655403.1 |
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| CDS TCA 90 bp | TTGGAGTCAGGACAGGAGTTTAATGAACAGGAGAAGGAATTTTGTTaGGTTTGTGGCCTTATGCTGATTCTTTTTGGGATGTTGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LESGQEFNEQEKEFC*VCGLMLILFGMLSS Trigger: GCTACTCAACATCCCAAAAAGAATCAGCATAAGGCCACAAACTCAACAAAATTCCTTCTCCTGTTCATTAAACTCCTGTCCTGACTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS GCA 90 bp | GGAGGTTTACTGGTAATGGAAAAGTATCACTTCCAACACAGGATGTaGTGTGAGCCTTGGTGGTATGTAACATATTCAGTAGTGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GGLLVMEKYHFQHRM*CEPWWYVTYSVVFS Trigger: TGAAAACACTACTGAATATGTTACATACCACCAAGGCTCACAGCACATCCTGTGTTGGAAGTGATACTTTTCCATTACCAGTAAACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS CCA 90 bp | TGTAAACTTTGCAATGAAATTCACCTTCCACTCAGCTCAACTTTATaGCTTCCTGAGCAAGGAGGTAAAGAACATGGAAGAGAAGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: CKLCNEIHLPLSSTL*LPEQGGKEHGREVD Trigger: ATCCACTTCTCTTCCATGTTCTTTACCTCCTTGCTCAGGAAGCCATAAAGTTGAGCTGAGTGGAAGGTGAATTTCATTGCAAAGTTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS TCA 90 bp | TGGTTTCTTCCTTGGCTTCTCTTTCTGAAATTGTCACTTAAATGTTaGCATACCCAGACTGTGCCCTTTGGCACTTATCTATTCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: WFLPWLLFLKLSLKC*HTQTVPFGTYLFSL Trigger: AAGTGAGAATAGATAAGTGCCAAAGGGCACAGTCTGGGTATGTCAACATTTAAGTGACAATTTCAGAAAGAGAAGCCAAGGAAGAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000655403.1 |
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| CDS GCA 90 bp | AGTTTACAAAGCGTTTTTCATTCATTTAGTAGCAGCATTCTCACATaGATTGTCTCTGATAGATGGCATGATGATCCACTTCCACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLQSVFHSFSSSILT*IVSDRWHDDPLPLG Trigger: ACCAAGTGGAAGTGGATCATCATGCCATCTATCAGAGACAATGCATGTGAGAATGCTGCTACTAAATGAATGAAAAACGCTTTGTAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS TCA 72 bp | AGCCTTCAGAAGGAGAGTGTCGCATGGTCTAGCTGCTaGGTGACCGCTGATCAACAGCTGGCTTCACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SLQKESVAWSSC*VTADQQLASPC Trigger: GCAAGGTGAAGCCAGCTGTTGATCAGCGGTCACTCAGCAGCTAGACCATGCGACACTCTCCTTCTGAAGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CCA 72 bp | TACCATAGGAGGCCCTGCCGAAGCTGGCACGCTGCATaGGAGCTATCCTTAAATGCCACTCAGAACACTCTC | + |
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Preference number: 6 (lower is better) Translates to: YHRRPCRSWHAA*ELSLNATQNTL Trigger: GAGAGTGTTCTGAGTGGCATTTAAGGATAGCTCCCATGCAGCGTGCCAGCTTCGGCAGGGCCTCCTATGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS TCA 72 bp | TTCAGAAGGAGAGTGTCGCATGGTCTAGCTGCTGAGTaGCCGCTGATCAACAGCTGGCTTCACCTTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: FRRRVSHGLAAE*PLINSWLHLAS Trigger: GGATGCAAGGTGAAGCCAGCTGTTGATCAGCGGTCACTCAGCAGCTAGACCATGCGACACTCTCCTTCTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CCA 72 bp | TGTTTTAGGGCTTACCATAGGAGGCCCTGCCGAAGCTaGCACGCTGCATGGGAGCTATCCTTAAATGCCACT | + |
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Preference number: 6 (lower is better) Translates to: CFRAYHRRPCRS*HAAWELSLNAT Trigger: AGTGGCATTTAAGGATAGCTCCCATGCAGCGTGCCAGCTTCGGCAGGGCCTCCTATGGTAAGCCCTAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CCA 72 bp | GTCTTTAGAGAGGAGCTATGTGGCCTTGAGAAAAGCTaGGTAGATGGACGGCCTGTCCTTGGAAATGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VFREELCGLEKS*VDGRPVLGNGL Trigger: GAGCCCATTTCCAAGGACAGGCCGTCCATCTACCCAGCTTTTCTCAAGGCCACATAGCTCCTCTCTAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CAA 90 bp | TGTGTCTGGAGTTTGCTCTTTTACATGTGCGCTGTGACAGGCTTCTaGCTTCTGTCACATGACTCCCAGCTGGAGAGGATGATGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CVWSLLFYMCAVTGF*LLSHDSQLERMMRG Trigger: TCCCCTCATCATCCTCTCCAGCTGGGAGTCATGTGACAGAAGCAAGAAGCCTGTCACAGCGCACATGTAAAAGAGCAAACTCCAGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CAA 72 bp | GTCTCCCCATCACAGCTGTACCAAGGCCACTTCTGGTaGCCTTCTTGCTTCTCCAACTGCTTTTCTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VSPSQLYQGHFW*PSCFSNCFSLV Trigger: AACCAGAGAAAAGCAGTTGGAGAAGCAAGAAGGCAACCAGAAGTGGCCTTGGTACAGCTGTGATGGGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS TCA 72 bp | TGTGTGTCTGGAGTTTGCTCTTTTACATGTGCGCTGTaGCAGGCTTCTTGCTTCTGTCACATGACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CVSGVCSFTCAL*QASCFCHMTPS Trigger: GCTGGGAGTCATGTGACAGAAGCAAGAAGCCTGTCACAGCGCACATGTAAAAGAGCAAACTCCAGACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS TCA 72 bp | AGATGTCTCAGAATCAGTGTGTTTGAACCTAGCTCATaGTGCTCCCACCCCCACAAACTATGCCTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RCLRISVFEPSS*CSHPHKLCLLL Trigger: CAGGAGCAGGCATAGTTTGTGGGGGTGGGAGCATCATGAGCTAGGTTCAAACACACTGATTCTGAGACATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655403.1 |
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| CDS GCA 72 bp | TCTCCCCATCACAGCTGTACCAAGGCCACTTCTGGTTaGCTTCTTGCTTCTCCAACTGCTTTTCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SPHHSCTKATSG*LLASPTAFLWF Trigger: AAACCAGAGAAAAGCAGTTGGAGAAGCAAGAAGGCAACCAGAAGTGGCCTTGGTACAGCTGTGATGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CCA 72 bp | TTACCTACACTCCCTGGACAATCACCTCCATTCCCATaGCTTCAATTACCGTCTCTACTACTGGCAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPTLPGQSPPFP*LQLPSLLLAAL Trigger: GAGAGCTGCCAGTAGTAGAGACGGTAATTGAAGCCATGGGAATGGAGGTGATTGTCCAGGGAGTGTAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000655403.1 |
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| CDS CCA 72 bp | ATTGTCTCCCCATCACAGCTGTACCAAGGCCACTTCTaGTTGCCTTCTTGCTTCTCCAACTGCTTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IVSPSQLYQGHF*LPSCFSNCFSL Trigger: CAGAGAAAAGCAGTTGGAGAAGCAAGAAGGCAACCAGAAGTGGCCTTGGTACAGCTGTGATGGGGAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CCA 72 bp | TTGATAACATTTACCAGCATTCAGGCTGGTCAGCCTTaGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LITFTSIQAGQP*FWLFSLSFPGW Trigger: CCAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGGTAAATGTTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000653145.1 ENST00000655403.1 ENST00000665173.1 |
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| CDS CCA 72 bp | ATGAATAGAGAAATCAGCATTCAGGCTGGTCAGCCTTaGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MNREISIQAGQP*FWLFSLSFPGW Trigger: CCAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGATTTCTCTATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665146.1 |
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| CDS CAA 72 bp | AGTTTGCTCTTTTACATGTGCGCTGTGACAGGCTTCTaGCTTCTGTCACATGACTCCCAGCTGGAGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLLFYMCAVTGF*LLSHDSQLERM Trigger: CATCCTCTCCAGCTGGGAGTCATGTGACAGAAGCAAGAAGCCTGTCACAGCGCACATGTAAAAGAGCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CAA 72 bp | CTTGATAACATTTACCAGCATTCAGGCTGGTCAGCCTaGGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LDNIYQHSGWSA*VLAFLAVLSRL Trigger: CAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGGTAAATGTTATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000653145.1 ENST00000655403.1 ENST00000665173.1 |
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| CDS CAA 90 bp | TTCGTCATTGTCTCCCCATCACAGCTGTACCAAGGCCACTTCTGGTaGCCTTCTTGCTTCTCCAACTGCTTTTCTCTGGTTTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FVIVSPSQLYQGHFW*PSCFSNCFSLVSSL Trigger: CAAGGAAGAAACCAGAGAAAAGCAGTTGGAGAAGCAAGAAGGCAACCAGAAGTGGCCTTGGTACAGCTGTGATGGGGAGACAATGACGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CAA 90 bp | CAGAACTTGTTCTGTGGTTCCCTAGATGTCTCAGAATCAGTGTGTTaGAACCTAGCTCATGATGCTCCCACCCCCACAAACTATGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QNLFCGSLDVSESVC*NLAHDAPTPTNYAC Trigger: GCAGGCATAGTTTGTGGGGGTGGGAGCATCATGAGCTAGGTTCAAACACACTGATTCTGAGACATCTAGGGAACCACAGAACAAGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655403.1 |
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| CDS GCA 72 bp | AACCTTATTTCCAGGAGAAGGTGGGTGGCGGATTCATaGTTGTTCTCAATCGTAGCGGTTGTTTGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: NLISRRRWVADS*LFSIVAVVWTQ Trigger: CTGAGTCCAAACAACCGCTACGATTGAGAACAAGCATGAATCCGCCACCCACCTTCTCCTGGAAATAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CCA 72 bp | GTTCAGCAACCCAATAACCTTATTTCCAGGAGAAGGTaGGTGGCGGATTCATGCTTGTTCTCAATCGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: VQQPNNLISRRR*VADSCLFSIVA Trigger: CGCTACGATTGAGAACAAGCATGAATCCGCCACCCACCTTCTCCTGGAAATAAGGTTATTGGGTTGCTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CAA 90 bp | CTCCAGATTCTTGATAACATTTACCAGCATTCAGGCTGGTCAGCCTaGGTTCTGGCTTTTCTCGCTGTCCTTTCCAGGCTGGTTTGGATA | + |
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Preference number: 6 (lower is better) Translates to: LQILDNIYQHSGWSA*VLAFLAVLSRLVWI Trigger: TATCCAAACCAGCCTGGAAAGGACAGCGAGAAAAGCCAGAACCAAGGCTGACCAGCCTGAATGCTGGTAAATGTTATCAAGAATCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS CAA 72 bp | GGCGGATTCATGCTTGTTCTCAATCGTAGCGGTTGTTaGGACTCAGTAGGAGTATTTGCTGTGAAGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GGFMLVLNRSGC*DSVGVFAVKSV Trigger: GACAGACTTCACAGCAAATACTCCTACTGAGTCCAAACAACCGCTACGATTGAGAACAAGCATGAATCCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000552584.2 ENST00000655403.1 ENST00000665146.1 ENST00000665173.1 |
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| CDS CAA 90 bp | CTCAGGGTGCAGAGCACAGGCTTGCCTGTTTATTTAGGTGTGAACTaGGAGTCAGGACAGGAGTTTAATGAACAGGAGAAGGAATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LRVQSTGLPVYLGVN*ESGQEFNEQEKEFC Trigger: ACAAAATTCCTTCTCCTGTTCATTAAACTCCTGTCCTGACTCCAAGTTCACACCTAAATAAACAGGCAAGCCTGTGCTCTGCACCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CAA 72 bp | CAGAGCACAGGCTTGCCTGTTTATTTAGGTGTGAACTaGGAGTCAGGACAGGAGTTTAATGAACAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QSTGLPVYLGVN*ESGQEFNEQEK Trigger: CTTCTCCTGTTCATTAAACTCCTGTCCTGACTCCAAGTTCACACCTAAATAAACAGGCAAGCCTGTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS TCA 72 bp | CTTCAATTACCGTCTCTACTACTGGCAGCTCTCAAATaGAATCTACATCTCCAGCCCAGAACTTGTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LQLPSLLLAALK*NLHLQPRTCSV Trigger: CACAGAACAAGTTCTGGGCTGGAGATGTAGATTTCATTTGAGAGCTGCCAGTAGTAGAGACGGTAATTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000655403.1 |
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| CDS CAA 72 bp | ATGAAGAAGAGAGGAGAGAGAAAGAGAGGCTTACCTTaGAGGGGAAATTGGGTAGAGGGACAAAGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: MKKRGERKRGLP*RGNWVEGQRNE Trigger: CTCATTTCTTTGTCCCTCTACCCAATTTCCCCTCAAAGGTAAGCCTCTCTTTCTCTCTCCTCTCTTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS CAA 72 bp | TGTCACTTAAATGTTGACATACCCAGACTGTGCCCTTaGGCACTTATCTATTCTCACTTTACCTACACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CHLNVDIPRLCP*ALIYSHFTYTP Trigger: GGGAGTGTAGGTAAAGTGAGAATAGATAAGTGCCAAAGGGCACAGTCTGGGTATGTCAACATTTAAGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000655403.1 |
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| CDS TCA 72 bp | CCTTGGCTTCTCTTTCTGAAATTGTCACTTAAATGTTaGCATACCCAGACTGTGCCCTTTGGCACTTATCTA | + |
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Preference number: 6 (lower is better) Translates to: PWLLFLKLSLKC*HTQTVPFGTYL Trigger: TAGATAAGTGCCAAAGGGCACAGTCTGGGTATGTCAACATTTAAGTGACAATTTCAGAAAGAGAAGCCAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000655403.1 |
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| CDS CAA 72 bp | TTGTCTCTGATAGATGGCATGATGATCCACTTCCACTaGGTTATTCTTTTCCCTCTGTGTTTTAGGGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: LSLIDGMMIHFH*VILFPLCFRAY Trigger: GTAAGCCCTAAAACACAGAGGGAAAAGAATAACCAAGTGGAAGTGGATCATCATGCCATCTATCAGAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CAA 90 bp | TTATTAAATATGAAGAAGAGAGGAGAGAGAAAGAGAGGCTTACCTTaGAGGGGAAATTGGGTAGAGGGACAAAGAAATGAGATGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LLNMKKRGERKRGLP*RGNWVEGQRNEMLE Trigger: CTCCAGCATCTCATTTCTTTGTCCCTCTACCCAATTTCCCCTCAAAGGTAAGCCTCTCTTTCTCTCTCCTCTCTTCTTCATATTTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS TCA 72 bp | AATGGAAAAGTATCACTTCCAACACAGGATGTGCTGTaGGCCTTGGTGGTATGTAACATATTCAGTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: NGKVSLPTQDVL*ALVVCNIFSSV Trigger: AACACTACTGAATATGTTACATACCACCAAGGCTCACAGCACATCCTGTGTTGGAAGTGATACTTTTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552584.2 ENST00000665173.1 |
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| CDS GCA 72 bp | AGCGTTTTTCATTCATTTAGTAGCAGCATTCTCACATaGATTGTCTCTGATAGATGGCATGATGATCCACTT | + |
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Preference number: 6 (lower is better) Translates to: SVFHSFSSSILT*IVSDRWHDDPL Trigger: AAGTGGATCATCATGCCATCTATCAGAGACAATGCATGTGAGAATGCTGCTACTAAATGAATGAAAAACGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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| CDS CAA 90 bp | TACAAAGCGTTTTTCATTCATTTAGTAGCAGCATTCTCACATGCATaGTCTCTGATAGATGGCATGATGATCCACTTCCACTTGGTTATT | + |
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Preference number: 6 (lower is better) Translates to: YKAFFIHLVAAFSHA*SLIDGMMIHFHLVI Trigger: AATAACCAAGTGGAAGTGGATCATCATGCCATCTATCAGAGACAATGCATGTGAGAATGCTGCTACTAAATGAATGAAAAACGCTTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653145.1 ENST00000655403.1 ENST00000665146.1 |
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