Pregenerated sensors for LINC02411 (Homo sapiens)
Ensembl gene IDs: ENSG00000256022Ensembl transcript IDs: ENST00000540490.6, ENST00000544251.6, ENST00000546180.2, ENST00000656677.1, ENST00000659673.1, ENST00000662161.1, ENST00000663397.1, ENST00000666224.1, ENST00000667656.1, ENST00000668337.1, ENST00000669225.1, ENST00000670083.1, ENST00000670513.1, ENST00000670939.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTGGGTTCCTTGGGTACTCCTATGCAGGGCAGGCATTTCCCACGTaGGTAAACATTTTGGGTGGGAGTGGGGCAAGCACAGCTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGFLGYSYAGQAFPT*VNILGGSGASTAGF Trigger: GAAGCCAGCTGTGCTTGCCCCACTCCCACCCAAAATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 90 bp | CTGGATTCTGTTTTGCTCCCTGAAGGTTTCTGTAGATGTGTCAGCTaGGAGACTGGTGCGTGCACTTGCCAAGCCCCCGCAGACTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LDSVLLPEGFCRCVS*ETGACTCQAPADSQ Trigger: CTGAGAGTCTGCGGGGGCTTGGCAAGTGCACGCACCAGTCTCCCAGCTGACACATCTACAGAAACCTTCAGGGAGCAAAACAGAATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS TCA 90 bp | GGTAAACATTTTGGGTGGGAGTGGGGCAAGCACAGCTGGCTTCTGTaGGCACACTCCACCCATCACTCAGCACTCTCGTTTCATCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GKHFGWEWGKHSWLL*AHSTHHSALSFHPS Trigger: AGAGGGATGAAACGAGAGTGCTGAGTGATGGGTGGAGTGTGCTCACAGAAGCCAGCTGTGCTTGCCCCACTCCCACCCAAAATGTTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS TCA 90 bp | TTTCACACCAGAGGCTCCCAGAAAGAGGCCGGCCAAGCTGGAGGATaGCATCACCTGGCTCAGAAACTCAAACCTCAGGATACAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FHTRGSQKEAGQAGG*HHLAQKLKPQDTVL Trigger: CAAAACTGTATCCTGAGGTTTGAGTTTCTGAGCCAGGTGATGTCATCCTCCAGCTTGGCCGGCCTCTTTCTGGGAGCCTCTGGTGTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 90 bp | CACCAGCACAGCTGTGCAATGGCATGGGGTTTACCACCTCACAGCTaGATTAAGGCAACAGATTGTGCAAAACTCCATGAGCCAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: HQHSCAMAWGLPPHS*IKATDCAKLHEPML Trigger: CAGCATTGGCTCATGGAGTTTTGCACAATCTGTTGCCTTAATGCAGCTGTGAGGTGGTAAACCCCATGCCATTGCACAGCTGTGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 90 bp | GCTGCATTAAGGCAACAGATTGTGCAAAACTCCATGAGCCAATGCTaGACAGAAAGATGTGGGGTTGCCAGATGGAAGGATGGAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: AALRQQIVQNSMSQC*TERCGVARWKDGGA Trigger: AGCACCTCCATCCTTCCATCTGGCAACCCCACATCTTTCTGTGCAGCATTGGCTCATGGAGTTTTGCACAATCTGTTGCCTTAATGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 90 bp | TTTAATAAATCTGGATGTGTCTCAGTAGTTCCCCTAAGCCAAGCCTaGTCTTTCGCCAAGCCCCACGGGCAGCCCATGAGTAAATGGAGT | + |
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Preference number: 5 (lower is better) Translates to: FNKSGCVSVVPLSQA*SFAKPHGQPMSKWS Trigger: ACTCCATTTACTCATGGGCTGCCCGTGGGGCTTGGCGAAAGAGCAGGCTTGGCTTAGGGGAACTACTGAGACACATCCAGATTTATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663397.1 ENST00000670513.1 |
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| CDS CCA 90 bp | CTCAGGATGAAAAGAGAAGTCTTGGCAACCCACGGTTTGAATACCTaGATGTGTCTCAGTAGTTCCCCTAAGCCAAGCCTGCTCTTTCGC | + |
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Preference number: 5 (lower is better) Translates to: LRMKREVLATHGLNT*MCLSSSPKPSLLFR Trigger: GCGAAAGAGCAGGCTTGGCTTAGGGGAACTACTGAGACACATCCAGGTATTCAAACCGTGGGTTGCCAAGACTTCTCTTTTCATCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS GCA 90 bp | CTCCCTCTTAGCATAGGTTTGGGATTCTGTGGGGTCTGTGTTGGTTaGTCCTGTGCCCACACCCTTTTAATAGTTAGCTTTCATGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LPLSIGLGFCGVCVG*SCAHTLLIVSFHAE Trigger: CTCTGCATGAAAGCTAACTATTAAAAGGGTGTGGGCACAGGAGCAACCAACACAGACCCCACAGAATCCCAAACCTATGCTAAGAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 90 bp | ACAGCTGCATTAAGGCAACAGATTGTGCAAAACTCCATGAGCCAATaGTGCACAGAAAGATGTGGGGTTGCCAGATGGAAGGATGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: TAALRQQIVQNSMSQ*CTERCGVARWKDGG Trigger: ACCTCCATCCTTCCATCTGGCAACCCCACATCTTTCTGTGCAGCATTGGCTCATGGAGTTTTGCACAATCTGTTGCCTTAATGCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 90 bp | TTTCATCCCTCTGTTGTTGAAGACTCCACCAGCACAGCTGTGCAATaGCATGGGGTTTACCACCTCACAGCTGCATTAAGGCAACAGATT | + |
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Preference number: 5 (lower is better) Translates to: FHPSVVEDSTSTAVQ*HGVYHLTAALRQQI Trigger: AATCTGTTGCCTTAATGCAGCTGTGAGGTGGTAAACCCCATGCCATTGCACAGCTGTGCTGGTGGAGTCTTCAACAACAGAGGGATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 90 bp | GGCTCTTCCCCCTTTCAGATCCATTTTAGAAGTTTCTTTATATCCTaGGTTCCTTGGGTACTCCTATGCAGGGCAGGCATTTCCCACGTG | + |
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Preference number: 5 (lower is better) Translates to: GSSPFQIHFRSFFIS*VPWVLLCRAGISHV Trigger: CACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACTTCTAAAATGGATCTGAAAGGGGGAAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 90 bp | CATTTTAGAAGTTTCTTTATATCCTGGGTTCCTTGGGTACTCCTATaGAGGGCAGGCATTTCCCACGTGGGTAAACATTTTGGGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: HFRSFFISWVPWVLL*RAGISHVGKHFGWE Trigger: CTCCCACCCAAAATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACTTCTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS TCA 90 bp | GGCCATCCCCTGCTGAGTCATCTCATCAGCATAAGGCATCAGGCGTaGAAAATAAAGGTCCTCCAATCACTCAAGACATTTCAAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: GHPLLSHLISIRHQA*KIKVLQSLKTFQDF Trigger: AAAGTCTTGAAATGTCTTGAGTGATTGGAGGACCTTTATTTTTCACGCCTGATGCCTTATGCTGATGAGATGACTCAGCAGGGGATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS GCA 90 bp | GCATTCAGATGGAAAGAAACGGTTCATTCTGTTGCATGTGCTGGTTaGCTTACTAGGTTTCATGCATTCTTCCAGGTTTCTCTGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: AFRWKETVHSVACAG*LTRFHAFFQVSLWG Trigger: ACCCCACAGAGAAACCTGGAAGAATGCATGAAACCTAGTAAGGCAACCAGCACATGCAACAGAATGAACCGTTTCTTTCCATCTGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000544251.6 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000663397.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS CCA 90 bp | CCCTTTCAGATCCATTTTAGAAGTTTCTTTATATCCTGGGTTCCTTaGGTACTCCTATGCAGGGCAGGCATTTCCCACGTGGGTAAACAT | + |
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Preference number: 5 (lower is better) Translates to: PFQIHFRSFFISWVP*VLLCRAGISHVGKH Trigger: ATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACTTCTAAAATGGATCTGAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS TCA 90 bp | GAGGGGCATCAGGAAAGAGAAGAAAGTTTGTGTTATGATCCTGTGTaGCACATAAGGCATTCTTATCAGTCATCTCAAAGATGGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: EGHQEREESLCYDPV*HIRHSYQSSQRWEE Trigger: TTCCTCCCATCTTTGAGATGACTGATAAGAATGCCTTATGTGTCACACAGGATCATAACACAAACTTTCTTCTCTTTCCTGATGCCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656677.1 ENST00000659673.1 ENST00000668337.1 ENST00000669225.1 |
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| CDS CAA 90 bp | GGGTACTCCTATGCAGGGCAGGCATTTCCCACGTGGGTAAACATTTaGGGTGGGAGTGGGGCAAGCACAGCTGGCTTCTGTGAGCACACT | + |
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Preference number: 6 (lower is better) Translates to: GYSYAGQAFPTWVNI*GGSGASTAGFCEHT Trigger: AGTGTGCTCACAGAAGCCAGCTGTGCTTGCCCCACTCCCACCCAAAATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS TCA 72 bp | AAGCCTGCTCTTTCGCCAAGCCCCACGGGCAGCCCATaGGTAAATGGAGTAGTGCGTCTCTGTGCAGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: KPALSPSPTGSP*VNGVVRLCAAK Trigger: CTTAGCTGCACAGAGACGCACTACTCCATTTACTCATGGGCTGCCCGTGGGGCTTGGCGAAAGAGCAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656677.1 ENST00000663397.1 ENST00000670513.1 |
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| CDS CCA 72 bp | GTTTTGCTCCCTGAAGGTTTCTGTAGATGTGTCAGCTaGGAGACTGGTGCGTGCACTTGCCAAGCCCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: VLLPEGFCRCVS*ETGACTCQAPA Trigger: TGCGGGGGCTTGGCAAGTGCACGCACCAGTCTCCCAGCTGACACATCTACAGAAACCTTCAGGGAGCAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS TCA 72 bp | AGAGGCTCCCAGAAAGAGGCCGGCCAAGCTGGAGGATaGCATCACCTGGCTCAGAAACTCAAACCTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RGSQKEAGQAGG*HHLAQKLKPQD Trigger: ATCCTGAGGTTTGAGTTTCTGAGCCAGGTGATGTCATCCTCCAGCTTGGCCGGCCTCTTTCTGGGAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 72 bp | CTTGGGTACTCCTATGCAGGGCAGGCATTTCCCACGTaGGTAAACATTTTGGGTGGGAGTGGGGCAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: LGYSYAGQAFPT*VNILGGSGAST Trigger: TGTGCTTGCCCCACTCCCACCCAAAATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CAA 72 bp | CCACCCATCACTCAGCACTCTCGTTTCATCCCTCTGTaGTTGAAGACTCCACCAGCACAGCTGTGCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: PPITQHSRFIPL*LKTPPAQLCNG Trigger: GCCATTGCACAGCTGTGCTGGTGGAGTCTTCAACAACAGAGGGATGAAACGAGAGTGCTGAGTGATGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 72 bp | ATCCCTCTGTTGTTGAAGACTCCACCAGCACAGCTGTaGAATGGCATGGGGTTTACCACCTCACAGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: IPLLLKTPPAQL*NGMGFTTSQLH Trigger: ATGCAGCTGTGAGGTGGTAAACCCCATGCCATTGCACAGCTGTGCTGGTGGAGTCTTCAACAACAGAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CAA 72 bp | CACCTGGCTCAGAAACTCAAACCTCAGGATACAGTTTaGGTCTTTCTGGCCTGGCCATCCCCTGCTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: HLAQKLKPQDTV*VFLAWPSPAES Trigger: TGACTCAGCAGGGGATGGCCAGGCCAGAAAGACCAAAACTGTATCCTGAGGTTTGAGTTTCTGAGCCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS CCA 72 bp | ACCTGGCTCAGAAACTCAAACCTCAGGATACAGTTTTaGTCTTTCTGGCCTGGCCATCCCCTGCTGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: TWLRNSNLRIQF*SFWPGHPLLSH Trigger: ATGACTCAGCAGGGGATGGCCAGGCCAGAAAGACCAAAACTGTATCCTGAGGTTTGAGTTTCTGAGCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS CCA 72 bp | AGAAAGAGGCCGGCCAAGCTGGAGGATGACATCACCTaGCTCAGAAACTCAAACCTCAGGATACAGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RKRPAKLEDDIT*LRNSNLRIQFW Trigger: CCAAAACTGTATCCTGAGGTTTGAGTTTCTGAGCCAGGTGATGTCATCCTCCAGCTTGGCCGGCCTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000540490.6 ENST00000544251.6 ENST00000546180.2 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 72 bp | TCTGTTGTTGAAGACTCCACCAGCACAGCTGTGCAATaGCATGGGGTTTACCACCTCACAGCTGCATTAAGG | + |
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Preference number: 6 (lower is better) Translates to: SVVEDSTSTAVQ*HGVYHLTAALR Trigger: CCTTAATGCAGCTGTGAGGTGGTAAACCCCATGCCATTGCACAGCTGTGCTGGTGGAGTCTTCAACAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 72 bp | AGGCAACAGATTGTGCAAAACTCCATGAGCCAATGCTaGACAGAAAGATGTGGGGTTGCCAGATGGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RQQIVQNSMSQC*TERCGVARWKD Trigger: ATCCTTCCATCTGGCAACCCCACATCTTTCTGTGCAGCATTGGCTCATGGAGTTTTGCACAATCTGTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 72 bp | AAAAGAGAAGTCTTGGCAACCCACGGTTTGAATACCTaGATGTGTCTCAGTAGTTCCCCTAAGCCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: KREVLATHGLNT*MCLSSSPKPSL Trigger: CAGGCTTGGCTTAGGGGAACTACTGAGACACATCCAGGTATTCAAACCGTGGGTTGCCAAGACTTCTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS CAA 90 bp | TTCCATACTCTCAGGATGAAAAGAGAAGTCTTGGCAACCCACGGTTaGAATACCTGGATGTGTCTCAGTAGTTCCCCTAAGCCAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FHTLRMKREVLATHG*NTWMCLSSSPKPSL Trigger: CAGGCTTGGCTTAGGGGAACTACTGAGACACATCCAGGTATTCAAACCGTGGGTTGCCAAGACTTCTCTTTTCATCCTGAGAGTATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS GCA 72 bp | AGCATAGGTTTGGGATTCTGTGGGGTCTGTGTTGGTTaGTCCTGTGCCCACACCCTTTTAATAGTTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SIGLGFCGVCVG*SCAHTLLIVSF Trigger: AAAGCTAACTATTAAAAGGGTGTGGGCACAGGAGCAACCAACACAGACCCCACAGAATCCCAAACCTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 72 bp | TTAAGGCAACAGATTGTGCAAAACTCCATGAGCCAATaGTGCACAGAAAGATGTGGGGTTGCCAGATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LRQQIVQNSMSQ*CTERCGVARWK Trigger: CTTCCATCTGGCAACCCCACATCTTTCTGTGCAGCATTGGCTCATGGAGTTTTGCACAATCTGTTGCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CAA 72 bp | CTCAGGATGAAAAGAGAAGTCTTGGCAACCCACGGTTaGAATACCTGGATGTGTCTCAGTAGTTCCCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: LRMKREVLATHG*NTWMCLSSSPK Trigger: CTTAGGGGAACTACTGAGACACATCCAGGTATTCAAACCGTGGGTTGCCAAGACTTCTCTTTTCATCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656677.1 |
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| CDS GCA 72 bp | AGTTTCTTTATATCCTGGGTTCCTTGGGTACTCCTATaGAGGGCAGGCATTTCCCACGTGGGTAAACATTTT | + |
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Preference number: 6 (lower is better) Translates to: SFFISWVPWVLL*RAGISHVGKHF Trigger: AAAATGTTTACCCACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CCA 72 bp | ATCCATTTTAGAAGTTTCTTTATATCCTGGGTTCCTTaGGTACTCCTATGCAGGGCAGGCATTTCCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: IHFRSFFISWVP*VLLCRAGISHV Trigger: CACGTGGGAAATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACTTCTAAAATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS CAA 90 bp | GAGTCCACATTTAGGCATTCAGATGGAAAGAAACGGTTCATTCTGTaGCATGTGCTGGTTGCCTTACTAGGTTTCATGCATTCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESTFRHSDGKKRFIL*HVLVALLGFMHSSR Trigger: CCTGGAAGAATGCATGAAACCTAGTAAGGCAACCAGCACATGCAACAGAATGAACCGTTTCTTTCCATCTGAATGCCTAAATGTGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000544251.6 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000663397.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS CCA 72 bp | CCCTTTCAGATCCATTTTAGAAGTTTCTTTATATCCTaGGTTCCTTGGGTACTCCTATGCAGGGCAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: PFQIHFRSFFIS*VPWVLLCRAGI Trigger: AATGCCTGCCCTGCATAGGAGTACCCAAGGAACCCAGGATATAAAGAAACTTCTAAAATGGATCTGAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000540490.6 ENST00000546180.2 ENST00000656677.1 ENST00000662161.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000670083.1 ENST00000670513.1 |
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| CDS GCA 72 bp | TGGAAAGAAACGGTTCATTCTGTTGCATGTGCTGGTTaGCTTACTAGGTTTCATGCATTCTTCCAGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WKETVHSVACAG*LTRFHAFFQVS Trigger: AGAAACCTGGAAGAATGCATGAAACCTAGTAAGGCAACCAGCACATGCAACAGAATGAACCGTTTCTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000544251.6 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000663397.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS TCA 72 bp | AGAGGGGCATCAGGAAAGAGAAGAAAGTTTGTGTTATaGTCCTGTGTGACACATAAGGCATTCTTATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGASGKRRKFVL*SCVTHKAFLSV Trigger: GACTGATAAGAATGCCTTATGTGTCACACAGGATCATAACACAAACTTTCTTCTCTTTCCTGATGCCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656677.1 ENST00000659673.1 ENST00000668337.1 ENST00000669225.1 |
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| CDS CAA 72 bp | TTTAGGCATTCAGATGGAAAGAAACGGTTCATTCTGTaGCATGTGCTGGTTGCCTTACTAGGTTTCATGCAT | + |
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Preference number: 6 (lower is better) Translates to: FRHSDGKKRFIL*HVLVALLGFMH Trigger: ATGCATGAAACCTAGTAAGGCAACCAGCACATGCAACAGAATGAACCGTTTCTTTCCATCTGAATGCCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000544251.6 ENST00000656677.1 ENST00000659673.1 ENST00000662161.1 ENST00000663397.1 ENST00000666224.1 ENST00000667656.1 ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 ENST00000670513.1 ENST00000670939.1 |
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| CDS TCA 72 bp | CAGGAAAGAGAAGAAAGTTTGTGTTATGATCCTGTGTaGCACATAAGGCATTCTTATCAGTCATCTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: QEREESLCYDPV*HIRHSYQSSQR Trigger: TCTTTGAGATGACTGATAAGAATGCCTTATGTGTCACACAGGATCATAACACAAACTTTCTTCTCTTTCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656677.1 ENST00000659673.1 ENST00000668337.1 ENST00000669225.1 |
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| CDS GCA 72 bp | GCTAGGGTAAAAGACACAACTTTTGATAGAGTTGTTTaGCACACAATGGCCTATTATTTAAACATAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ARVKDTTFDRVV*HTMAYYLNISR Trigger: TCTGCTTATGTTTAAATAATAGGCCATTGTGTGGCAAACAACTCTATCAAAAGTTGTGTCTTTTACCCTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000668337.1 ENST00000669225.1 ENST00000670083.1 |
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