Pregenerated sensors for LINC02409 (Homo sapiens)

Ensembl gene IDs: ENSG00000257920

Ensembl transcript IDs: ENST00000547515.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATGAATGACGGGCTCCATCCCACCATCAGGCTTCTTGTAAAACGTTaGTGTGAAGTGGTTCTCCTTTCCAGTGAATTCCTCTATTCTGTC	+
Preference number: 5 (lower is better) Translates to: MNDGLHPTIRLLVKR*CEVVLLSSEFLYSV Trigger: GACAGAATAGAGGAATTCACTGGAAAGGAGAACCACTTCACAGCAACGTTTTACAAGAAGCCTGATGGTGGGATGGAGCCCGTCATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS CCA 72 bp	GTGGCTGGAGACCTGGGTCCCAGTCCCAGCCCTAATTaGCATTGTCACTCTGGGATCTCCCTCTCTGGGCCT	+
Preference number: 6 (lower is better) Translates to: VAGDLGPSPSPN*HCHSGISLSGP Trigger: AGGCCCAGAGAGGGAGATCCCAGAGTGACAATGCCAATTAGGGCTGGGACTGGGACCCAGGTCTCCAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS CAA 90 bp	GCTAAAGGGTGTGTTCTCAAGTGCATGTCCTCTGGCGGGTGGGTTTaGATTCTGGCAGAGGCAGGGCACTGTGGTGGCTGGAGACCTGGG	+
Preference number: 6 (lower is better) Translates to: AKGCVLKCMSSGGWV*ILAEAGHCGGWRPG Trigger: CCCAGGTCTCCAGCCACCACAGTGCCCTGCCTCTGCCAGAATCAAAACCCACCCGCCAGAGGACATGCACTTGAGAACACACCCTTTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS GCA 72 bp	GGGCTCCATCCCACCATCAGGCTTCTTGTAAAACGTTaGTGTGAAGTGGTTCTCCTTTCCAGTGAATTCCTC	+
Preference number: 6 (lower is better) Translates to: GLHPTIRLLVKR*CEVVLLSSEFL Trigger: GAGGAATTCACTGGAAAGGAGAACCACTTCACAGCAACGTTTTACAAGAAGCCTGATGGTGGGATGGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS CCA 72 bp	CTCCTTTCCAGTGAATTCCTCTATTCTGTCTGTCAATaGAGAATGAGCCATGTAACTGACAGCAGAAAGTGC	+
Preference number: 6 (lower is better) Translates to: LLSSEFLYSVCQ*RMSHVTDSRKC Trigger: GCACTTTCTGCTGTCAGTTACATGGCTCATTCTCCATTGACAGACAGAATAGAGGAATTCACTGGAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS TCA 72 bp	CCATGTAGGAATCTCCATCTGCACTTCACTAAAGGATaGGAGGAACAGATGTCTTTGGGTGGTATTCTTGTT	+
Preference number: 6 (lower is better) Translates to: PCRNLHLHFTKG*EEQMSLGGILV Trigger: AACAAGAATACCACCCAAAGACATCTGTTCCTCTCATCCTTTAGTGAAGTGCAGATGGAGATTCCTACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS GCA 72 bp	CTTTTAAAAGAAGTTCCTCTCAGTAGGCCAACAGATTaGCTGTGTTTCACATCAGCTCCAAGTGAAGAACCA	+
Preference number: 6 (lower is better) Translates to: LLKEVPLSRPTD*LCFTSAPSEEP Trigger: TGGTTCTTCACTTGGAGCTGATGTGAAACACAGGCAATCTGTTGGCCTACTGAGAGGAACTTCTTTTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547515.1
CDS CCA 72 bp	TGCACTTCACTAAAGGATGAGAGGAACAGATGTCTTTaGGTGGTATTCTTGTTCTTGGCTTTTAAAAGAAGT	+
Preference number: 6 (lower is better) Translates to: CTSLKDERNRCL*VVFLFLAFKRS Trigger: ACTTCTTTTAAAAGCCAAGAACAAGAATACCACCCAAAGACATCTGTTCCTCTCATCCTTTAGTGAAGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547515.1

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