Pregenerated sensors for LINC02405 (Homo sapiens)
Ensembl gene IDs: ENSG00000249345, ENSG00000285478Ensembl transcript IDs: ENST00000512624.6, ENST00000540244.6, ENST00000546062.2, ENST00000643748.2, ENST00000645068.1, ENST00000647171.2, ENST00000651439.2, ENST00000651633.2, ENST00000654211.1, ENST00000656033.1, ENST00000656597.1, ENST00000656788.1, ENST00000658026.1, ENST00000658967.1, ENST00000659807.1, ENST00000660214.1, ENST00000660588.1, ENST00000662057.1, ENST00000662160.1, ENST00000663797.1, ENST00000665379.1, ENST00000665933.1, ENST00000666944.1, ENST00000669743.1, ENST00000670299.1, ENST00000670705.1, ENST00000671095.1, ENST00000671361.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCGAGCAAGTGCAGGGTCCAGCTGGCTGGTCCTGCAGGGCCTGTaGTGGCACCTAGGTGGGGATGCCTGTGGCCCTGAAGCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: ERASAGSSWLVLQGL*WHLGGDACGPEAQE Trigger: CTCTTGGGCTTCAGGGCCACAGGCATCCCCACCTAGGTGCCACCACAGGCCCTGCAGGACCAGCCAGCTGGACCCTGCACTTGCTCGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS GCA 90 bp | GTGACAGGGATGTGTGGTTTAGCTGGCCTGCCACACTCACCCCCTTaGAGGAGGCAGCACGTGAGCGAGCAAGTGCAGGGTCCAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: VTGMCGLAGLPHSPP*RRQHVSEQVQGPAG Trigger: GCCAGCTGGACCCTGCACTTGCTCGCTCACGTGCTGCCTCCTGCAAGGGGGTGAGTGTGGCAGGCCAGCTAAACCACACATCCCTGTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS TCA 90 bp | ACTTGTCCTGCAGACTGTGCTCATTCCGCTGAGCCCCGAGCTGTCTaGGGGAGAGGAGCTGCATGCGGCCATTTCCATTCTCTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TCPADCAHSAEPRAV*GRGAACGHFHSLPS Trigger: GGAAGGGAGAGAATGGAAATGGCCGCATGCAGCTCCTCTCCCTCAGACAGCTCGGGGCTCAGCGGAATGAGCACAGTCTGCAGGACAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000659807.1 ENST00000660588.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS GCA 90 bp | CTCATGAGGTGTGTAGATGTGGCTCAGAGGCCTGGACAGCCAGTTTaGTTCCCCCTACATCCAAGGGAGCCTGGGAGGAAGGTTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LMRCVDVAQRPGQPV*FPLHPREPGRKVLA Trigger: AGCCAAAACCTTCCTCCCAGGCTCCCTTGGATGTAGGGGGAAGCAAACTGGCTGTCCAGGCCTCTGAGCCACATCTACACACCTCATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS TCA 90 bp | CTTGAGGTCGTTGTCAGGATCCTGCGTTCCAGAATCCCTCCTATGTaGAGCCAAGCTCAGGTGCAGCCCAGGCCACTGCCTTCTTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LEVVVRILRSRIPPM*SQAQVQPRPLPSFC Trigger: ACAAAAAGAAGGCAGTGGCCTGGGCTGCACCTGAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS GCA 90 bp | AGAGGAAGCCACTGCCACCTCTCAGCTGGAGAAACAGAGGGAAGATaGAATGTTATTACAGCCAGGAGCAGGGCCGGCCTTGAGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: RGSHCHLSAGETEGR*NVITARSRAGLEKL Trigger: CAACTTCTCAAGGCCGGCCCTGCTCCTGGCTGTAATAACATTGCATCTTCCCTCTGTTTCTCCAGCTGAGAGGTGGCAGTGGCTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 90 bp | ATCAACTCTGCCAGCCACCAGAGGAAGCCACTGCCACCTCTCAGCTaGAGAAACAGAGGGAAGATGCAATGTTATTACAGCCAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: INSASHQRKPLPPLS*RNRGKMQCYYSQEQ Trigger: CTGCTCCTGGCTGTAATAACATTGCATCTTCCCTCTGTTTCTCCAGCTGAGAGGTGGCAGTGGCTTCCTCTGGTGGCTGGCAGAGTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | TGGATGCACACTAGGGACTCATTGAATTACCAGGTAGCTGGATTTTaGCCCATCAATGGGCAATCCACGGCAGTCCCGAAAGGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: WMHTRDSLNYQVAGF*PINGQSTAVPKGRE Trigger: CTCCCTGCCTTTCGGGACTGCCGTGGATTGCCCATTGATGGGTCAAAATCCAGCTACCTGGTAATTCAATGAGTCCCTAGTGTGCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS GCA 90 bp | GCTTCCCTGATTCTGAAGCAATGCTCTCCATCTCTAAGGCAATGTTaGACAGGCCCTCTCATGAGGTGTGTAGATGTGGCTCAGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ASLILKQCSPSLRQC*TGPLMRCVDVAQRP Trigger: AGGCCTCTGAGCCACATCTACACACCTCATGAGAGGGCCTGTGCAACATTGCCTTAGAGATGGAGAGCATTGCTTCAGAATCAGGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CCA 90 bp | GATGCAATGTTATTACAGCCAGGAGCAGGGCCGGCCTTGAGAAGTTaGAATGGAAGTGAACCTCTTTCAGAGAGCTGGAGGCAGGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: DAMLLQPGAGPALRS*NGSEPLSESWRQVG Trigger: TCCTACCTGCCTCCAGCTCTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGGCCCTGCTCCTGGCTGTAATAACATTGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 90 bp | GGCCATTTCCATTCTCTCCCTTCCGCTTCTCTAGTGGATAATTCCTaGTGGCCATTTAACACTCAAGCCGGAGTGCTGGGAAAGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GHFHSLPSASLVDNS*WPFNTQAGVLGKEE Trigger: CTCTTCCTTTCCCAGCACTCCGGCTTGAGTGTTAAATGGCCAGCAGGAATTATCCACTAGAGAAGCGGAAGGGAGAGAATGGAAATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000546062.2 ENST00000643748.2 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000671095.1 |
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| CDS GCA 90 bp | GAGCTGCTTTTCCACACCAAAGGCAGCAAGTCACTTGTGTTATCCTaGAAACTCCTTCCTAACTGCCTCCTAGGAGAGTGGAACCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ELLFHTKGSKSLVLS*KLLPNCLLGEWNLV Trigger: CACCAGGTTCCACTCTCCTAGGAGGCAGTTAGGAAGGAGTTTGCAGGATAACACAAGTGACTTGCTGCCTTTGGTGTGGAAAAGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 90 bp | TTGGCAGGTCGCAAAGGTGATGACCTAGGGGAAGTTCCTCTGAGCTaGTTTTCCACACCAAAGGCAGCAAGTCACTTGTGTTATCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LAGRKGDDLGEVPLS*FSTPKAASHLCYPA Trigger: TGCAGGATAACACAAGTGACTTGCTGCCTTTGGTGTGGAAAAGCAGCTCAGAGGAACTTCCCCTAGGTCATCACCTTTGCGACCTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 90 bp | GCATCTTTGGCATTCATTCTAACCTTGAGGTCGTTGTCAGGATCCTaGGTTCCAGAATCCCTCCTATGTGAAGCCAAGCTCAGGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASLAFILTLRSLSGS*VPESLLCEAKLRCS Trigger: GCTGCACCTGAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAGGTTAGAATGAATGCCAAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658026.1 ENST00000663797.1 |
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| CDS CCA 90 bp | CCGGCCTTGAGAAGTTGGAATGGAAGTGAACCTCTTTCAGAGAGCTaGAGGCAGGTAGGAGATGCTGGGAGCATTTTGACAAAGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: PALRSWNGSEPLSES*RQVGDAGSILTKMS Trigger: GGACATCTTTGTCAAAATGCTCCCAGCATCTCCTACCTGCCTCCAGCTCTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 90 bp | CAGTTTGCTTCCCCCTACATCCAAGGGAGCCTGGGAGGAAGGTTTTaGCTTTGTCTCCAAGTGAAGCTTTCTCACCGTAACAAATCCACT | + |
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Preference number: 5 (lower is better) Translates to: QFASPYIQGSLGGRF*LCLQVKLSHRNKST Trigger: AGTGGATTTGTTACGGTGAGAAAGCTTCACTTGGAGACAAAGCCAAAACCTTCCTCCCAGGCTCCCTTGGATGTAGGGGGAAGCAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CCA 90 bp | CATTTCCATTCTCTCCCTTCCGCTTCTCTAGTGGATAATTCCTGCTaGCCATTTAACACTCAAGCCGGAGTGCTGGGAAAGGAAGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: HFHSLPSASLVDNSC*PFNTQAGVLGKEEH Trigger: GTGCTCTTCCTTTCCCAGCACTCCGGCTTGAGTGTTAAATGGCCAGCAGGAATTATCCACTAGAGAAGCGGAAGGGAGAGAATGGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000546062.2 ENST00000643748.2 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000671095.1 |
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| CDS TCA 90 bp | CATCTGCCTCAGCAAGAGAATATGCCTTGGCTGGCCTGCTTAGGATaGGAGACCACATGGAGAACAGCCCATCTTTCCAACAGAATTCAT | + |
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Preference number: 5 (lower is better) Translates to: HLPQQENMPWLACLG*ETTWRTAHLSNRIH Trigger: ATGAATTCTGTTGGAAAGATGGGCTGTTCTCCATGTGGTCTCTCATCCTAAGCAGGCCAGCCAAGGCATATTCTCTTGCTGAGGCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 90 bp | GTGAGTCCAGCTTCCAAAGGCTTTGTGTGCTTCTGTTTTCCTTCTTaGACATCTGCCTCAGCAAGAGAATATGCCTTGGCTGGCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VSPASKGFVCFCFPS*TSASAREYALAGLL Trigger: AAGCAGGCCAGCCAAGGCATATTCTCTTGCTGAGGCAGATGTTCAAGAAGGAAAACAGAAGCACACAAAGCCTTTGGAAGCTGGACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS CCA 90 bp | ACTCCTGAGATTCTGGGCATCAGGTCTACATCTCTGTCATCATCCTaGCCAGCGTCTACCTTGCGAAATGATCAAAATGATGACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: TPEILGIRSTSLSSS*PASTLRNDQNDDLH Trigger: GTGGAGGTCATCATTTTGATCATTTCGCAAGGTAGACGCTGGCCAGGATGATGACAGAGATGTAGACCTGATGCCCAGAATCTCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS CCA 90 bp | TGGGCTGCTGCGCATCTCTTCCCAACTCAATGCTCAGCACTGTCATaGCAGTTGTCTGAAATTGGCCAGCGTGAAAGTATTTACACCAAA | + |
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Preference number: 5 (lower is better) Translates to: WAAAHLFPTQCSALS*QLSEIGQRESIYTK Trigger: TTTGGTGTAAATACTTTCACGCTGGCCAATTTCAGACAACTGCCATGACAGTGCTGAGCATTGAGTTGGGAAGAGATGCGCAGCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | ACATCCAAGGGAGCCTGGGAGGAAGGTTTTGGCTTTGTCTCCAAGTaGAGCTTTCTCACCGTAACAAATCCACTGGGATCATTTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: TSKGAWEEGFGFVSK*SFLTVTNPLGSFSL Trigger: CAGTGAAAATGATCCCAGTGGATTTGTTACGGTGAGAAAGCTTCACTTGGAGACAAAGCCAAAACCTTCCTCCCAGGCTCCCTTGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 |
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| CDS GCA 90 bp | GCTCCCAAATCACACAAATGGTTGTGGAATCAAGCAGTATCACATTaGTCCTACGGGCAGTTTATGGTTGACACATCTCTCCAACGAGGG | + |
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Preference number: 5 (lower is better) Translates to: APKSHKWLWNQAVSH*SYGQFMVDTSLQRG Trigger: CCCTCGTTGGAGAGATGTGTCAACCATAAACTGCCCGTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGATTTGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 90 bp | GTCCTGGCTTTTCCCTATCTCCTCCCTGATAATCTCTGGATTACCTaGGAAATTCAATCTGGAATTGGGCACCACCCCATACAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VLAFPYLLPDNLWIT*EIQSGIGHHPIQCR Trigger: TCTGCATTGTATGGGGTGGTGCCCAATTCCAGATTGAATTTCCCAGGTAATCCAGAGATTATCAGGGAGGAGATAGGGAAAAGCCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 90 bp | ATTCACCACTTACATTGCTTCTACCAACTTCCAGCTAGTAGCACCTaGACCTCAGTGTTTGAAGATGGCCCTCCCTCTCTATTTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: IHHLHCFYQLPASST*TSVFEDGPPSLFAE Trigger: TTCAGCAAATAGAGAGGGAGGGCCATCTTCAAACACTGAGGTGCAGGTGCTACTAGCTGGAAGTTGGTAGAAGCAATGTAAGTGGTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS CCA 90 bp | GGGAAGAAGCTTTTAAAAGGAGTGCTATCAAGCTGGTCACCACTGTaGGGCAATCAGAGCTTAAACTCAGTGAGGAACATTTGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GKKLLKGVLSSWSPL*GNQSLNSVRNIWKE Trigger: CTCCTTCCAAATGTTCCTCACTGAGTTTAAGCTCTGATTGCCCCACAGTGGTGACCAGCTTGATAGCACTCCTTTTAAAAGCTTCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS GCA 90 bp | GGAACCTGGTGTAAATGTCTTAGAAGCACCTCCAAAGAAGATGCCTaGTGTGTTCAGTTGCAACTTGTTCCTTCCCAGAAGATGCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: GTWCKCLRSTSKEDA*CVQLQLVPSQKMPL Trigger: TAAAGGCATCTTCTGGGAAGGAACAAGTTGCAACTGAACACAGCAGGCATCTTCTTTGGAGGTGCTTCTAAGACATTTACACCAGGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 90 bp | AAGATGAAAGTCCTGGCTTTTCCCTATCTCCTCCCTGATAATCTCTaGATTACCTGGGAAATTCAATCTGGAATTGGGCACCACCCCATA | + |
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Preference number: 5 (lower is better) Translates to: KMKVLAFPYLLPDNL*ITWEIQSGIGHHPI Trigger: TATGGGGTGGTGCCCAATTCCAGATTGAATTTCCCAGGTAATCCAGAGATTATCAGGGAGGAGATAGGGAAAAGCCAGGACTTTCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | GGACAGTGGAAGTCACACTCCTCCCTTCAGGTAGCACTCAACACATaGATATTTTCCAACTCCTTCAATCTTGAATCAAGTGTGGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: GQWKSHSSLQVALNT*IFSNSFNLESSVAL Trigger: TAAGGCCACACTTGATTCAAGATTGAAGGAGTTGGAAAATATTCATGTGTTGAGTGCTACCTGAAGGGAGGAGTGTGACTTCCACTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS GCA 90 bp | CCTTATTCCAAAGTGCTGACGTTTTGCAAGATGGTGACAATACTATaGAATTTCTCCATCTCCCTTGTAGTCAGGAGAGGCTGTAGAACA | + |
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Preference number: 5 (lower is better) Translates to: PYSKVLTFCKMVTIL*NFSISLVVRRGCRT Trigger: TGTTCTACAGCCTCTCCTGACTACAAGGGAGATGGAGAAATTGCATAGTATTGTCACCATCTTGCAAAACGTCAGCACTTTGGAATAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 90 bp | GTACACATCAAGCAAAACCATGCTCCCAAATCACACAAATGGTTGTaGAATCAAGCAGTATCACATTGCTCCTACGGGCAGTTTATGGTT | + |
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Preference number: 5 (lower is better) Translates to: VHIKQNHAPKSHKWL*NQAVSHCSYGQFMV Trigger: AACCATAAACTGCCCGTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGATTTGGGAGCATGGTTTTGCTTGATGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | TTCAGTTGCAACTTGTTCCTTCCCAGAAGATGCCTTTATCACCCATaGAACGTCGTTCTACATTCTTCCTTATTCCAAAGTGCTGACGTT | + |
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Preference number: 5 (lower is better) Translates to: FSCNLFLPRRCLYHP*NVVLHSSLFQSADV Trigger: AACGTCAGCACTTTGGAATAAGGAAGAATGTAGAACGACGTTTCATGGGTGATAAAGGCATCTTCTGGGAAGGAACAAGTTGCAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | GGTTCTTTCCTCATAATCAGCAAAGTGGAGGATGCAGTTTTCTCATaGTGTCATCAGCTAGAGGATGACACTGAGATGAGAATTCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GSFLIISKVEDAVFS*CHQLEDDTEMRIQV Trigger: CACTTGAATTCTCATCTCAGTGTCATCCTCTAGCTGATGACATCATGAGAAAACTGCATCCTCCACTTTGCTGATTATGAGGAAAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS TCA 90 bp | TCAGGTAGCACTCAACACATGAATATTTTCCAACTCCTTCAATCTTaGATCAAGTGTGGCCTTATGACTAGTCAAGGCGGTAGTCATACC | + |
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Preference number: 5 (lower is better) Translates to: SGSTQHMNIFQLLQS*IKCGLMTSQGGSHT Trigger: GGTATGACTACCGCCTTGACTAGTCATAAGGCCACACTTGATTCAAGATTGAAGGAGTTGGAAAATATTCATGTGTTGAGTGCTACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 90 bp | ATCTTATTATGGCTTCATTTCCTTGCCTGCTCCACACTTGCCATTTaGATGTCCCAGAAAGTGATTTTTGTACCTGACAAGCGGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: ILLWLHFLACSTLAI*MSQKVIFVPDKRQI Trigger: TATCTGCCGCTTGTCAGGTACAAAAATCACTTTCTGGGACATTCAAATGGCAAGTGTGGAGCAGGCAAGGAAATGAAGCCATAATAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS GCA 90 bp | AAGGAAGGACTGCATGTTCACTTTCCACCCATTCAATTGTCCCTTTaGCATAATTACAGAGGTAAAATCAGCCAAGATCTCTCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KEGLHVHFPPIQLSL*HNYRGKISQDLSSS Trigger: GGAAGAAGAGAGATCTTGGCTGATTTTACCTCTGTAATTATGGCAAAGGGACAATTGAATGGGTGGAAAGTGAACATGCAGTCCTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS CCA 90 bp | AAGAATGTACACATCAAGCAAAACCATGCTCCCAAATCACACAAATaGTTGTGGAATCAAGCAGTATCACATTGCTCCTACGGGCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KNVHIKQNHAPKSHK*LWNQAVSHCSYGQF Trigger: AAACTGCCCGTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGATTTGGGAGCATGGTTTTGCTTGATGTGTACATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 90 bp | ATTTCCTTGCCTGCTCCACACTTGCCATTTGAATGTCCCAGAAAGTaGTTTTTGTACCTGACAAGCGGCAGATACTCTTTACAAAATTCA | + |
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Preference number: 5 (lower is better) Translates to: ISLPAPHLPFECPRK*FLYLTSGRYSLQNS Trigger: TGAATTTTGTAAAGAGTATCTGCCGCTTGTCAGGTACAAAAATCACTTTCTGGGACATTCAAATGGCAAGTGTGGAGCAGGCAAGGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 90 bp | CACATGGAGAACAGCCCATCTTTCCAACAGAATTCATCCTTTCTATaGCAAGCTGCAAATTTCAGATCTCTTCTTTTACTCATACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: HMENSPSFQQNSSFL*QAANFRSLLLLILN Trigger: ATTCAGTATGAGTAAAAGAAGAGATCTGAAATTTGCAGCTTGTCATAGAAAGGATGAATTCTGTTGGAAAGATGGGCTGTTCTCCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 90 bp | AGGAGACATAAAATATGCATGTGTTTAGAAACCCAATTACTCAGCTaGGAAACTCTATCTTATTATGGCTTCATTTCCTTGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRHKICMCLETQLLS*ETLSYYGFISLPAP Trigger: TGGAGCAGGCAAGGAAATGAAGCCATAATAAGATAGAGTTTCTCAGCTGAGTAATTGGGTTTCTAAACACATGCATATTTTATGTCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 90 bp | TTAAACTCAGTGAGGAACATTTGGAAGGAGCATAGAATACACACCTaGGAGTTATCTTCCCTTGACAATAGAGAAATGAAACTAACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LNSVRNIWKEHRIHT*ELSSLDNREMKLTY Trigger: ATACGTTAGTTTCATTTCTCTATTGTCAAGGGAAGATAACTCTCAGGTGTGTATTCTATGCTCCTTCCAAATGTTCCTCACTGAGTTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS TCA 90 bp | CAAATTTCACCATTACTGTCTATCTTTGTCCTACTTATTGGTAGATaGCACAAATGTCCTCCTTCCTCATGTCATAAAGCTTTCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QISPLLSIFVLLIGR*HKCPPSSCHKAFNS Trigger: AGAATTGAAAGCTTTATGACATGAGGAAGGAGGACATTTGTGTCATCTACCAATAAGTAGGACAAAGATAGACAGTAATGGTGAAATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS TCA 90 bp | ATGTCTGAGGTTAGAGAAGACTTCTTTAGAAATTTATGTCTAAGCTaGAGCCTAAAGTCCATAGGAAGTAGATCCAGTAAAGGAAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSEVREDFFRNLCLS*SLKSIGSRSSKGSK Trigger: TTTACTTCCTTTACTGGATCTACTTCCTATGGACTTTAGGCTTCAGCTTAGACATAAATTTCTAAAGAAGTCTTCTCTAACCTCAGACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 72 bp | GCCTGCCACACTCACCCCCTTGCAGGAGGCAGCACGTaGGCGAGCAAGTGCAGGGTCCAGCTGGCTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ACHTHPLAGGST*ASKCRVQLAGP Trigger: AGGACCAGCCAGCTGGACCCTGCACTTGCTCGCTCACGTGCTGCCTCCTGCAAGGGGGTGAGTGTGGCAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS CCA 72 bp | AGTGCAGGGTCCAGCTGGCTGGTCCTGCAGGGCCTGTaGTGGCACCTAGGTGGGGATGCCTGTGGCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAGSSWLVLQGL*WHLGGDACGPE Trigger: TTCAGGGCCACAGGCATCCCCACCTAGGTGCCACCACAGGCCCTGCAGGACCAGCCAGCTGGACCCTGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS CCA 72 bp | GAGGCAGCACGTGAGCGAGCAAGTGCAGGGTCCAGCTaGCTGGTCCTGCAGGGCCTGTGGTGGCACCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: EAARERASAGSS*LVLQGLWWHLG Trigger: ACCTAGGTGCCACCACAGGCCCTGCAGGACCAGCCAGCTGGACCCTGCACTTGCTCGCTCACGTGCTGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS GCA 72 bp | ATGTGTGGTTTAGCTGGCCTGCCACACTCACCCCCTTaGAGGAGGCAGCACGTGAGCGAGCAAGTGCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MCGLAGLPHSPP*RRQHVSEQVQG Trigger: ACCCTGCACTTGCTCGCTCACGTGCTGCCTCCTGCAAGGGGGTGAGTGTGGCAGGCCAGCTAAACCACACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS TCA 72 bp | GCAGACTGTGCTCATTCCGCTGAGCCCCGAGCTGTCTaGGGGAGAGGAGCTGCATGCGGCCATTTCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ADCAHSAEPRAV*GRGAACGHFHS Trigger: AGAATGGAAATGGCCGCATGCAGCTCCTCTCCCTCAGACAGCTCGGGGCTCAGCGGAATGAGCACAGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000659807.1 ENST00000660588.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS TCA 72 bp | GTTGTCAGGATCCTGCGTTCCAGAATCCCTCCTATGTaGAGCCAAGCTCAGGTGCAGCCCAGGCCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVRILRSRIPPM*SQAQVQPRPLP Trigger: AGGCAGTGGCCTGGGCTGCACCTGAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS GCA 72 bp | TGTGTAGATGTGGCTCAGAGGCCTGGACAGCCAGTTTaGTTCCCCCTACATCCAAGGGAGCCTGGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CVDVAQRPGQPV*FPLHPREPGRK Trigger: CTTCCTCCCAGGCTCCCTTGGATGTAGGGGGAAGCAAACTGGCTGTCCAGGCCTCTGAGCCACATCTACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CAA 72 bp | GTGTGTAGATGTGGCTCAGAGGCCTGGACAGCCAGTTaGCTTCCCCCTACATCCAAGGGAGCCTGGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VCRCGSEAWTAS*LPPTSKGAWEE Trigger: TTCCTCCCAGGCTCCCTTGGATGTAGGGGGAAGCAAACTGGCTGTCCAGGCCTCTGAGCCACATCTACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CAA 90 bp | TCTCATGAGGTGTGTAGATGTGGCTCAGAGGCCTGGACAGCCAGTTaGCTTCCCCCTACATCCAAGGGAGCCTGGGAGGAAGGTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHEVCRCGSEAWTAS*LPPTSKGAWEEGFG Trigger: GCCAAAACCTTCCTCCCAGGCTCCCTTGGATGTAGGGGGAAGCAAACTGGCTGTCCAGGCCTCTGAGCCACATCTACACACCTCATGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS TCA 72 bp | AGGAGCAGGGCCGGCCTTGAGAAGTTGGAATGGAAGTaGACCTCTTTCAGAGAGCTGGAGGCAGGTAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSRAGLEKLEWK*TSFRELEAGRR Trigger: TCTCCTACCTGCCTCCAGCTCTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGGCCCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 72 bp | CACTGCCACCTCTCAGCTGGAGAAACAGAGGGAAGATaGAATGTTATTACAGCCAGGAGCAGGGCCGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HCHLSAGETEGR*NVITARSRAGL Trigger: AAGGCCGGCCCTGCTCCTGGCTGTAATAACATTGCATCTTCCCTCTGTTTCTCCAGCTGAGAGGTGGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CAA 72 bp | TGCAATTCAGGAGCTGGTAATCCGTACAGCCAACGCTaGAAGGTACTGGGTCCTGGGGTGAGTCCTTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CNSGAGNPYSQR*KVLGPGVSPCK Trigger: CTTGCAAGGACTCACCCCAGGACCCAGTACCTTCAAGCGTTGGCTGTACGGATTACCAGCTCCTGAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000540244.6 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 |
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| CDS CAA 90 bp | GGCTTCCCTGATTCTGAAGCAATGCTCTCCATCTCTAAGGCAATGTaGCACAGGCCCTCTCATGAGGTGTGTAGATGTGGCTCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFPDSEAMLSISKAM*HRPSHEVCRCGSEA Trigger: GGCCTCTGAGCCACATCTACACACCTCATGAGAGGGCCTGTGCAACATTGCCTTAGAGATGGAGAGCATTGCTTCAGAATCAGGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CAA 90 bp | GGCATCAGGTCTACATCTCTGTCATCATCCTGGCCAGCGTCTACCTaGCGAAATGATCAAAATGATGACCTCCACAGGCGCCGTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GIRSTSLSSSWPAST*RNDQNDDLHRRRVL Trigger: GAGGACACGGCGCCTGTGGAGGTCATCATTTTGATCATTTCGCAAGGTAGACGCTGGCCAGGATGATGACAGAGATGTAGACCTGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS GCA 72 bp | TTGCTTTACAGGGGCTTGAGGTCGTTGTCAGGATCCTaGGTTCCAGAATCCCTCCTATGTGAAGCCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLYRGLRSLSGS*VPESLLCEAKL Trigger: GAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAGCCCCTGTAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000662160.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS GCA 72 bp | TTGGAGTTCACTGCCTTGAGGTCGTTGTCAGGATCCTaGGTTCCAGAATCCCTCCTATGTGAAGCCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LEFTALRSLSGS*VPESLLCEAKL Trigger: GAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAGGCAGTGAACTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS CCA 72 bp | TCCCCCTACATCCAAGGGAGCCTGGGAGGAAGGTTTTaGCTTTGTCTCCAAGTGAAGCTTTCTCACCGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPYIQGSLGGRF*LCLQVKLSHRN Trigger: GTTACGGTGAGAAAGCTTCACTTGGAGACAAAGCCAAAACCTTCCTCCCAGGCTCCCTTGGATGTAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CCA 72 bp | TTATTACAGCCAGGAGCAGGGCCGGCCTTGAGAAGTTaGAATGGAAGTGAACCTCTTTCAGAGAGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQPGAGPALRS*NGSEPLSESWR Trigger: CCTCCAGCTCTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGGCCCTGCTCCTGGCTGTAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CAA 90 bp | GGAATGAAGGCTATGTATGGGCTTCTGTCCCATCCTGGCCAGTTGTaGACGATTAACCATGGAAAGCAGTTTCCCCCGTCTGGGTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GMKAMYGLLSHPGQL*TINHGKQFPPSGSQ Trigger: CTGAGACCCAGACGGGGGAAACTGCTTTCCATGGTTAATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAGCCTTCATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS CAA 90 bp | CCTGGAATGAAGGCTATGTATGGGCTTCTGTCCCATCCTGGCCAGTaGTTGACGATTAACCATGGAAAGCAGTTTCCCCCGTCTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGMKAMYGLLSHPGQ*LTINHGKQFPPSGS Trigger: AGACCCAGACGGGGGAAACTGCTTTCCATGGTTAATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAGCCTTCATTCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS TCA 72 bp | CTATGTATGGGCTTCTGTCCCATCCTGGCCAGTTGTTaGCGATTAACCATGGAAAGCAGTTTCCCCCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCMGFCPILASC*RLTMESSFPRL Trigger: CAGACGGGGGAAACTGCTTTCCATGGTTAATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS TCA 72 bp | GGAGCCTGGGAGGAAGGTTTTGGCTTTGTCTCCAAGTaGAGCTTTCTCACCGTAACAAATCCACTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GAWEEGFGFVSK*SFLTVTNPLGS Trigger: GGATCCCAGTGGATTTGTTACGGTGAGAAAGCTTCACTTGGAGACAAAGCCAAAACCTTCCTCCCAGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000662160.1 ENST00000671095.1 |
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| CDS TCA 72 bp | CAGCAAGAGAATATGCCTTGGCTGGCCTGCTTAGGATaGGAGACCACATGGAGAACAGCCCATCTTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QQENMPWLACLG*ETTWRTAHLSN Trigger: GTTGGAAAGATGGGCTGTTCTCCATGTGGTCTCTCATCCTAAGCAGGCCAGCCAAGGCATATTCTCTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS GCA 72 bp | CGCAAAGGTGATGACCTAGGGGAAGTTCCTCTGAGCTaGTTTTCCACACCAAAGGCAGCAAGTCACTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKGDDLGEVPLS*FSTPKAASHLC Trigger: ACACAAGTGACTTGCTGCCTTTGGTGTGGAAAAGCAGCTCAGAGGAACTTCCCCTAGGTCATCACCTTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 72 bp | ATTGAATTACCAGGTAGCTGGATTTTGACCCATCAATaGGCAATCCACGGCAGTCCCGAAAGGCAGGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IELPGSWILTHQ*AIHGSPERQGA Trigger: TGCTCCCTGCCTTTCGGGACTGCCGTGGATTGCCCATTGATGGGTCAAAATCCAGCTACCTGGTAATTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
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| CDS CCA 72 bp | TCTCTCCCTTCCGCTTCTCTAGTGGATAATTCCTGCTaGCCATTTAACACTCAAGCCGGAGTGCTGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPSASLVDNSC*PFNTQAGVLGK Trigger: CTTTCCCAGCACTCCGGCTTGAGTGTTAAATGGCCAGCAGGAATTATCCACTAGAGAAGCGGAAGGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000546062.2 ENST00000643748.2 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000671095.1 |
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| CDS CAA 72 bp | GCTATGTATGGGCTTCTGTCCCATCCTGGCCAGTTGTaGACGATTAACCATGGAAAGCAGTTTCCCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AMYGLLSHPGQL*TINHGKQFPPS Trigger: AGACGGGGGAAACTGCTTTCCATGGTTAATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS CAA 72 bp | AAGGCTATGTATGGGCTTCTGTCCCATCCTGGCCAGTaGTTGACGATTAACCATGGAAAGCAGTTTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KAMYGLLSHPGQ*LTINHGKQFPP Trigger: CGGGGGAAACTGCTTTCCATGGTTAATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS CAA 90 bp | ATTGCTTCTACCAACTTCCAGCTAGTAGCACCTGCACCTCAGTGTTaGAAGATGGCCCTCCCTCTCTATTTGCTGAAAGCTGCAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IASTNFQLVAPAPQC*KMALPLYLLKAARQ Trigger: CTGCCTTGCAGCTTTCAGCAAATAGAGAGGGAGGGCCATCTTCAAACACTGAGGTGCAGGTGCTACTAGCTGGAAGTTGGTAGAAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 72 bp | GGAGCCTGGGAGGAAGGTTTTGGCTTTGTCTCCAAGTaGAGCTTTCTCACCGTAACAAATCCACTGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GAWEEGFGFVSK*SFLTVTNPLGS Trigger: TGATCCCAGTGGATTTGTTACGGTGAGAAAGCTTCACTTGGAGACAAAGCCAAAACCTTCCTCCCAGGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 |
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| CDS GCA 72 bp | GCATTCATTCTAACCTTGAGGTCGTTGTCAGGATCCTaGGTTCCAGAATCCCTCCTATGTGAAGCCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AFILTLRSLSGS*VPESLLCEAKL Trigger: GAGCTTGGCTTCACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAGGTTAGAATGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658026.1 ENST00000663797.1 |
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| CDS CAA 72 bp | TCTACATCTCTGTCATCATCCTGGCCAGCGTCTACCTaGCGAAATGATCAAAATGATGACCTCCACAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: STSLSSSWPAST*RNDQNDDLHRR Trigger: GCGCCTGTGGAGGTCATCATTTTGATCATTTCGCAAGGTAGACGCTGGCCAGGATGATGACAGAGATGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS CAA 72 bp | CTGAGCTGCTTTTCCACACCAAAGGCAGCAAGTCACTaGTGTTATCCTGCAAACTCCTTCCTAACTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSCFSTPKAASH*CYPANSFLTAS Trigger: GGAGGCAGTTAGGAAGGAGTTTGCAGGATAACACAAGTGACTTGCTGCCTTTGGTGTGGAAAAGCAGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS CAA 72 bp | GATGCAATGTTATTACAGCCAGGAGCAGGGCCGGCCTaGAGAAGTTGGAATGGAAGTGAACCTCTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DAMLLQPGAGPA*RSWNGSEPLSE Trigger: CTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGGCCCTGCTCCTGGCTGTAATAACATTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS CAA 72 bp | ACCAACTTCCAGCTAGTAGCACCTGCACCTCAGTGTTaGAAGATGGCCCTCCCTCTCTATTTGCTGAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TNFQLVAPAPQC*KMALPLYLLKA Trigger: AGCTTTCAGCAAATAGAGAGGGAGGGCCATCTTCAAACACTGAGGTGCAGGTGCTACTAGCTGGAAGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS CAA 90 bp | TGTGAGTCCAGCTTCCAAAGGCTTTGTGTGCTTCTGTTTTCCTTCTaGAACATCTGCCTCAGCAAGAGAATATGCCTTGGCTGGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CESSFQRLCVLLFSF*NICLSKRICLGWPA Trigger: AGCAGGCCAGCCAAGGCATATTCTCTTGCTGAGGCAGATGTTCAAGAAGGAAAACAGAAGCACACAAAGCCTTTGGAAGCTGGACTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS TCA 72 bp | ACTAGGGACTCATTGAATTACCAGGTAGCTGGATTTTaGCCCATCAATGGGCAATCCACGGCAGTCCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TRDSLNYQVAGF*PINGQSTAVPK Trigger: TTTCGGGACTGCCGTGGATTGCCCATTGATGGGTCAAAATCCAGCTACCTGGTAATTCAATGAGTCCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
||
| CDS TCA 72 bp | ATGCAATGTTATTACAGCCAGGAGCAGGGCCGGCCTTaGGAAGTTGGAATGGAAGTGAACCTCTTTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MQCYYSQEQGRP*EVGMEVNLFQR Trigger: TCTCTGAAAGAGGTTCACTTCCATTCCAACTTCTCAAGGCCGGCCCTGCTCCTGGCTGTAATAACATTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS GCA 72 bp | ATTCTGAAGCAATGCTCTCCATCTCTAAGGCAATGTTaGACAGGCCCTCTCATGAGGTGTGTAGATGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ILKQCSPSLRQC*TGPLMRCVDVA Trigger: AGCCACATCTACACACCTCATGAGAGGGCCTGTGCAACATTGCCTTAGAGATGGAGAGCATTGCTTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000512624.6 ENST00000645068.1 ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000662160.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 ENST00000671095.1 |
||
| CDS GCA 72 bp | TTACATTGCTTCTACCAACTTCCAGCTAGTAGCACCTaGACCTCAGTGTTTGAAGATGGCCCTCCCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LHCFYQLPASST*TSVFEDGPPSL Trigger: TAGAGAGGGAGGGCCATCTTCAAACACTGAGGTGCAGGTGCTACTAGCTGGAAGTTGGTAGAAGCAATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS CCA 72 bp | TCTTTTTGTTCTGAGCCCTGGAATGAAGGCTATGTATaGGCTTCTGTCCCATCCTGGCCAGTTGTTGACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SFCSEPWNEGYV*ASVPSWPVVDD Trigger: ATCGTCAACAACTGGCCAGGATGGGACAGAAGCCCATACATAGCCTTCATTCCAGGGCTCAGAACAAAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
||
| CDS CAA 90 bp | CCATGGAAAGCAGTTTCCCCCGTCTGGGTCTCAGGTTTTCTAATCTaGAATAAGCAGCTTCAGCAGTATTTACACATCAGCAGCCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PWKAVSPVWVSGFLI*NKQLQQYLHISSRS Trigger: AGATCGGCTGCTGATGTGTAAATACTGCTGAAGCTGCTTATTCAAGATTAGAAAACCTGAGACCCAGACGGGGGAAACTGCTTTCCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
||
| CDS CAA 72 bp | AAGGCATCTTTGGCATTCATTCTAACCTTGAGGTCGTaGTCAGGATCCTGCGTTCCAGAATCCCTCCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: KASLAFILTLRS*SGSCVPESLLC Trigger: ACATAGGAGGGATTCTGGAACGCAGGATCCTGACAACGACCTCAAGGTTAGAATGAATGCCAAAGATGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658026.1 ENST00000663797.1 |
||
| CDS TCA 72 bp | GCTTCCAAAGGCTTTGTGTGCTTCTGTTTTCCTTCTTaGACATCTGCCTCAGCAAGAGAATATGCCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASKGFVCFCFPS*TSASAREYALA Trigger: AGCCAAGGCATATTCTCTTGCTGAGGCAGATGTTCAAGAAGGAAAACAGAAGCACACAAAGCCTTTGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS CCA 72 bp | ATTCTGGGCATCAGGTCTACATCTCTGTCATCATCCTaGCCAGCGTCTACCTTGCGAAATGATCAAAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: ILGIRSTSLSSS*PASTLRNDQND Trigger: ATCATTTTGATCATTTCGCAAGGTAGACGCTGGCCAGGATGATGACAGAGATGTAGACCTGATGCCCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
||
| CDS CCA 72 bp | AAAATGCACCATCTCTCTAAGGAGGTGCCTGTTCATTaGGTGTTCTTCCCCAGGAATGACGTTTCCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KMHHLSKEVPVH*VFFPRNDVSCF Trigger: AAAACAGGAAACGTCATTCCTGGGGAAGAACACCCAATGAACAGGCACCTCCTTAGAGAGATGGTGCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
||
| CDS CCA 72 bp | AAGCAAAACCATGCTCCCAAATCACACAAATGGTTGTaGAATCAAGCAGTATCACATTGCTCCTACGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KQNHAPKSHKWL*NQAVSHCSYGQ Trigger: CTGCCCGTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGATTTGGGAGCATGGTTTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS CCA 72 bp | CATAGGCAGAACCCCAGTGTTCATGCACCTTACATCTaGGTGGGAATGCAATTCAACAATAGAGTGGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HRQNPSVHAPYI*VGMQFNNRVVN Trigger: ATTCACCACTCTATTGTTGAATTGCATTCCCACCCAGATGTAAGGTGCATGAACACTGGGGTTCTGCCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS CAA 72 bp | GCAGTTTCCCCCGTCTGGGTCTCAGGTTTTCTAATCTaGAATAAGCAGCTTCAGCAGTATTTACACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVSPVWVSGFLI*NKQLQQYLHIS Trigger: GCTGATGTGTAAATACTGCTGAAGCTGCTTATTCAAGATTAGAAAACCTGAGACCCAGACGGGGGAAACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000512624.6 ENST00000540244.6 ENST00000546062.2 ENST00000643748.2 ENST00000645068.1 ENST00000647171.2 ENST00000651439.2 ENST00000651633.2 ENST00000654211.1 ENST00000656033.1 ENST00000656788.1 ENST00000658026.1 ENST00000662160.1 ENST00000663797.1 ENST00000665379.1 ENST00000666944.1 ENST00000670299.1 ENST00000670705.1 ENST00000671095.1 ENST00000671361.1 |
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| CDS CAA 72 bp | AAAAATAACAGGACAAAGGCTGCGTCTTGGTCAAATTaGGAGTTCACTGCCTTGAGGTCGTTGTCAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: KNNRTKAASWSN*EFTALRSLSGS Trigger: GGATCCTGACAACGACCTCAAGGCAGTGAACTCCAAATTTGACCAAGACGCAGCCTTTGTCCTGTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
||
| CDS CAA 72 bp | AGCTTCCAAAGGCTTTGTGTGCTTCTGTTTTCCTTCTaGAACATCTGCCTCAGCAAGAGAATATGCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFQRLCVLLFSF*NICLSKRICLG Trigger: GCCAAGGCATATTCTCTTGCTGAGGCAGATGTTCAAGAAGGAAAACAGAAGCACACAAAGCCTTTGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS TCA 72 bp | CTGTTTTATGATGGGAAAACAAGACGTTCACACTCCTaGGATTCTGGGCATCAGGTCTACATCTCTGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LFYDGKTRRSHS*DSGHQVYISVI Trigger: GATGACAGAGATGTAGACCTGATGCCCAGAATCTCAGGAGTGTGAACGTCTTGTTTTCCCATCATAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS TCA 72 bp | AGCAGTATCACATTGCTCCTACGGGCAGTTTATGGTTaGCACATCTCTCCAACGAGGGTTAAAGAAAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSITLLLRAVYG*HISPTRVKERH Trigger: ATGTCTTTCTTTAACCCTCGTTGGAGAGATGTGTCAACCATAAACTGCCCGTAGGAGCAATGTGATACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS TCA 72 bp | TCTATTTGGTCTGCATCTATTGTGTATGAAGGGTGGTaGTCTTATACAATGCTGGGCTGCTGCGCATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SIWSASIVYEGW*SYTMLGCCASL Trigger: AAGAGATGCGCAGCAGCCCAGCATTGTATAAGATCACCACCCTTCATACACAATAGATGCAGACCAAATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 72 bp | AAAGTGCTGACGTTTTGCAAGATGGTGACAATACTATaGAATTTCTCCATCTCCCTTGTAGTCAGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KVLTFCKMVTIL*NFSISLVVRRG Trigger: GCCTCTCCTGACTACAAGGGAGATGGAGAAATTGCATAGTATTGTCACCATCTTGCAAAACGTCAGCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 72 bp | TCACACAAATGGTTGTGGAATCAAGCAGTATCACATTaGTCCTACGGGCAGTTTATGGTTGACACATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHKWLWNQAVSH*SYGQFMVDTSL Trigger: GAGAGATGTGTCAACCATAAACTGCCCGTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS GCA 72 bp | GTGGTCATAATAATACAAAAATATCTTCGGCCTTTTTaGTGGACCCGTGACAGGGATGTGTGGTTTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVIIIQKYLRPF*WTRDRDVWFSW Trigger: CCAGCTAAACCACACATCCCTGTCACGGGTCCAGCAAAAAGGCCGAAGATATTTTTGTATTATTATGACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS CCA 72 bp | GGAGGTTATAAAAATAACAGGACAAAGGCTGCGTCTTaGTCAAATTTGGAGTTCACTGCCTTGAGGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGYKNNRTKAAS*SNLEFTALRSL Trigger: CAACGACCTCAAGGCAGTGAACTCCAAATTTGACCAAGACGCAGCCTTTGTCCTGTTATTTTTATAACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000546062.2 ENST00000643748.2 |
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| CDS CCA 72 bp | AGGCATGAAGCTGGTCTGTCTGGGGAAATAAATGCATaGGCAGGCTTTCAAGTAGCTATACAATTTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RHEAGLSGEINA*AGFQVAIQFLS Trigger: AGAGAGAAATTGTATAGCTACTTGAAAGCCTGCCCATGCATTTATTTCCCCAGACAGACCAGCTTCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CCA 72 bp | GTCATAATAATACAAAAATATCTTCGGCCTTTTTGCTaGACCCGTGACAGGGATGTGTGGTTTAGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VIIIQKYLRPFC*TRDRDVWFSWP Trigger: AGGCCAGCTAAACCACACATCCCTGTCACGGGTCCAGCAAAAAGGCCGAAGATATTTTTGTATTATTATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000660214.1 ENST00000662057.1 |
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| CDS CCA 72 bp | CTTTTAAAAGGAGTGCTATCAAGCTGGTCACCACTGTaGGGCAATCAGAGCTTAAACTCAGTGAGGAACATT | + |
|
Preference number: 6 (lower is better) Translates to: LLKGVLSSWSPL*GNQSLNSVRNI Trigger: AATGTTCCTCACTGAGTTTAAGCTCTGATTGCCCCACAGTGGTGACCAGCTTGATAGCACTCCTTTTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS CAA 90 bp | AAATGTCTTAGAAGCACCTCCAAAGAAGATGCCTGCTGTGTTCAGTaGCAACTTGTTCCTTCCCAGAAGATGCCTTTATCACCCATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KCLRSTSKEDACCVQ*QLVPSQKMPLSPMK Trigger: TTTCATGGGTGATAAAGGCATCTTCTGGGAAGGAACAAGTTGCAACTGAACACAGCAGGCATCTTCTTTGGAGGTGCTTCTAAGACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CAA 90 bp | TCTTCCCAACTCAATGCTCAGCACTGTCATGGCAGTTGTCTGAAATaGGCCAGCGTGAAAGTATTTACACCAAAGAAAATGGCAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSQLNAQHCHGSCLK*ASVKVFTPKKMANC Trigger: ACAGTTTGCCATTTTCTTTGGTGTAAATACTTTCACGCTGGCCAATTTCAGACAACTGCCATGACAGTGCTGAGCATTGAGTTGGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 72 bp | CTCATAATCAGCAAAGTGGAGGATGCAGTTTTCTCATaGTGTCATCAGCTAGAGGATGACACTGAGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIISKVEDAVFS*CHQLEDDTEMR Trigger: TCTCATCTCAGTGTCATCCTCTAGCTGATGACATCATGAGAAAACTGCATCCTCCACTTTGCTGATTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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| CDS CCA 72 bp | CACATCAAGCAAAACCATGCTCCCAAATCACACAAATaGTTGTGGAATCAAGCAGTATCACATTGCTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: HIKQNHAPKSHK*LWNQAVSHCSY Trigger: GTAGGAGCAATGTGATACTGCTTGATTCCACAACCATTTGTGTGATTTGGGAGCATGGTTTTGCTTGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS CAA 72 bp | CTCAATGCTCAGCACTGTCATGGCAGTTGTCTGAAATaGGCCAGCGTGAAAGTATTTACACCAAAGAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: LNAQHCHGSCLK*ASVKVFTPKKM Trigger: CATTTTCTTTGGTGTAAATACTTTCACGCTGGCCAATTTCAGACAACTGCCATGACAGTGCTGAGCATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
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| CDS TCA 72 bp | TCCACTGGGATCATTTTCACTGTAGCCGTGCTGTTGTaGCTGGCAATCTTATGGTGCAGTATTTTCATATTA | + |
|
Preference number: 6 (lower is better) Translates to: STGIIFTVAVLL*LAILWCSIFIL Trigger: TAATATGAAAATACTGCACCATAAGATTGCCAGTCACAACAGCACGGCTACAGTGAAAATGATCCCAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000651439.2 ENST00000651633.2 ENST00000656033.1 ENST00000656597.1 ENST00000658967.1 ENST00000660214.1 ENST00000662057.1 ENST00000665379.1 ENST00000665933.1 ENST00000666944.1 ENST00000669743.1 ENST00000670705.1 |
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| CDS TCA 72 bp | AACTTGTTCCTTCCCAGAAGATGCCTTTATCACCCATaGAACGTCGTTCTACATTCTTCCTTATTCCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLFLPRRCLYHP*NVVLHSSLFQS Trigger: ACTTTGGAATAAGGAAGAATGTAGAACGACGTTTCATGGGTGATAAAGGCATCTTCTGGGAAGGAACAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654211.1 ENST00000656788.1 |
||
| CDS TCA 72 bp | CTCCAGGTGATCATTTCAGTCCTCATACCACAATTGTaGGTTTGTGAGATACTCCCCATTTTACAGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQVIISVLIPQL*VCEILPILQMK Trigger: TTTCATCTGTAAAATGGGGAGTATCTCACAAACTCACAATTGTGGTATGAGGACTGAAATGATCACCTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658026.1 ENST00000663797.1 |
||
| CDS TCA 72 bp | ACTCAACACATGAATATTTTCCAACTCCTTCAATCTTaGATCAAGTGTGGCCTTATGACTAGTCAAGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TQHMNIFQLLQS*IKCGLMTSQGG Trigger: ACCGCCTTGACTAGTCATAAGGCCACACTTGATTCAAGATTGAAGGAGTTGGAAAATATTCATGTGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS TCA 72 bp | AAGTCACACTCCTCCCTTCAGGTAGCACTCAACACATaGATATTTTCCAACTCCTTCAATCTTGAATCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KSHSSLQVALNT*IFSNSFNLESS Trigger: ACTTGATTCAAGATTGAAGGAGTTGGAAAATATTCATGTGTTGAGTGCTACCTGAAGGGAGGAGTGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
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| CDS TCA 72 bp | CCATTACTGTCTATCTTTGTCCTACTTATTGGTAGATaGCACAAATGTCCTCCTTCCTCATGTCATAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLSIFVLLIGR*HKCPPSSCHKA Trigger: AGCTTTATGACATGAGGAAGGAGGACATTTGTGTCATCTACCAATAAGTAGGACAAAGATAGACAGTAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
||
| CDS TCA 72 bp | GTGAGGAACATTTGGAAGGAGCATAGAATACACACCTaGGAGTTATCTTCCCTTGACAATAGAGAAATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VRNIWKEHRIHT*ELSSLDNREMK Trigger: TTTCATTTCTCTATTGTCAAGGGAAGATAACTCTCAGGTGTGTATTCTATGCTCCTTCCAAATGTTCCTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
||
| CDS CAA 90 bp | TTGAAACTCAAATTTCACCATTACTGTCTATCTTTGTCCTACTTATaGGTAGATGACACAAATGTCCTCCTTCCTCATGTCATAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKLKFHHYCLSLSYL*VDDTNVLLPHVIKL Trigger: AAGCTTTATGACATGAGGAAGGAGGACATTTGTGTCATCTACCAATAAGTAGGACAAAGATAGACAGTAATGGTGAAATTTGAGTTTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
||
| CDS TCA 72 bp | GATCATTTCAGTCCTCATACCACAATTGTGAGTTTGTaGGATACTCCCCATTTTACAGATGAAATAAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: DHFSPHTTIVSL*DTPHFTDEISN Trigger: ATTGCTTATTTCATCTGTAAAATGGGGAGTATCTCACAAACTCACAATTGTGGTATGAGGACTGAAATGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658026.1 ENST00000663797.1 |
||
| CDS CAA 72 bp | GACACTGAGATGAGAATTCAAGTGCAAATAATTTCTTaGGTCCGTATTATCAGAAAACACTGTAGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: DTEMRIQVQIIS*VRIIRKHCRNV Trigger: CACATTCCTACAGTGTTTTCTGATAATACGGACCAAAGAAATTATTTGCACTTGAATTCTCATCTCAGTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
||
| CDS TCA 72 bp | GTTAGAGAAGACTTCTTTAGAAATTTATGTCTAAGCTaGAGCCTAAAGTCCATAGGAAGTAGATCCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: VREDFFRNLCLS*SLKSIGSRSSK Trigger: TTTACTGGATCTACTTCCTATGGACTTTAGGCTTCAGCTTAGACATAAATTTCTAAAGAAGTCTTCTCTAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000670299.1 ENST00000671361.1 |
||
| CDS CAA 72 bp | GTTTTGAAACTCAAATTTCACCATTACTGTCTATCTTaGTCCTACTTATTGGTAGATGACACAAATGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLKLKFHHYCLS*SYLLVDDTNVL Trigger: GAGGACATTTGTGTCATCTACCAATAAGTAGGACAAAGATAGACAGTAATGGTGAAATTTGAGTTTCAAAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665933.1 ENST00000669743.1 |
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