Pregenerated sensors for LINC02402 (Homo sapiens)
Ensembl gene IDs: ENSG00000257510Ensembl transcript IDs: ENST00000550337.2, ENST00000662847.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCGCTTGGACACATCATCTGTTCTTCCCTAATCCATCGTTAGCCTaGGATCCTCTAGCAGGATACCTCTTTGTATATCTCCTGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LAWTHHLFFPNPSLA*DPLAGYLFVYLLVF Trigger: GAAAACCAGGAGATATACAAAGAGGTATCCTGCTAGAGGATCCCAGGCTAACGATGGATTAGGGAAGAACAGATGATGTGTCCAAGCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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| CDS TCA 90 bp | GCCCTAACCCTGTTCCTTGATATGCAACTTTCTTTAGGTCAGGGATaGTACTCATCATTCACCAGTGTTGCCACTTCCTCTGTTGTATTC | + |
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Preference number: 5 (lower is better) Translates to: ALTLFLDMQLSLGQG*YSSFTSVATSSVVF Trigger: GAATACAACAGAGGAAGTGGCAACACTGGTGAATGATGAGTATCATCCCTGACCTAAAGAAAGTTGCATATCAAGGAACAGGGTTAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS GCA 90 bp | AGCCTCAAGGCTAGAAGCCATGCCAAGGATTTGCCATCAGACTATTaGAATATCTGTATGAATTGGGTGAGTTCCTCTTTCCTCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLKARSHAKDLPSDY*NICMNWVSSSFLKV Trigger: CACTTTGAGGAAAGAGGAACTCACCCAATTCATACAGATATTGCAATAGTCTGATGGCAAATCCTTGGCATGGCTTCTAGCCTTGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS TCA 90 bp | TGTCCTTTTCTCTTTGGTAAGTGGAGTTTCCCAACTCCCGTTCAATaGTCTGTCAAAGTTAGAATGCACATGAAAGGTGCATTGAGACAA | + |
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Preference number: 5 (lower is better) Translates to: CPFLFGKWSFPTPVQ*SVKVRMHMKGALRQ Trigger: TTGTCTCAATGCACCTTTCATGTGCATTCTAACTTTGACAGATCATTGAACGGGAGTTGGGAAACTCCACTTACCAAAGAGAAAAGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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| CDS TCA 90 bp | TATGAATTGGGTGAGTTCCTCTTTCCTCAAAGTGCTCAAATAATTTaGGGTTCCTGGGACTGTCAGAAAGTGACATTCCTTAGTTACCAA | + |
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Preference number: 5 (lower is better) Translates to: YELGEFLFPQSAQII*GSWDCQKVTFLSYQ Trigger: TTGGTAACTAAGGAATGTCACTTTCTGACAGTCCCAGGAACCTCAAATTATTTGAGCACTTTGAGGAAAGAGGAACTCACCCAATTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS CCA 72 bp | CCTCGCTTGGACACATCATCCTTGACTGTAAGTTTCTaGCTAGCACTGGAGTTTCTTTCACTGGAGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PRLDTSSLTVSF*LALEFLSLEAS Trigger: AGATGCCTCCAGTGAAAGAAACTCCAGTGCTAGCCAGAAACTTACAGTCAAGGATGATGTGTCCAAGCGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS TCA 72 bp | AAAACCCAGATCCTCCAAGGCCCTAACCCTGTTCCTTaGTATGCAACTTTCTTTAGGTCAGGGATGATACTC | + |
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Preference number: 6 (lower is better) Translates to: KTQILQGPNPVP*YATFFRSGMIL Trigger: GAGTATCATCCCTGACCTAAAGAAAGTTGCATATCAAGGAACAGGGTTAGGGCCTTGGAGGATCTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CCA 72 bp | ATGCTGTTCCCTATTCCACCCCTTTCCAGGGAGTTCTaGGCACAGCATTTTAGAATGTACAGAGATAAACCA | + |
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Preference number: 6 (lower is better) Translates to: MLFPIPPLSREF*AQHFRMYRDKP Trigger: TGGTTTATCTCTGTACATTCTAAAATGCTGTGCCCAGAACTCCCTGGAAAGGGGTGGAATAGGGAACAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CAA 90 bp | GCCTCATCATGCATAATCCACATGCCAAAGGACCTGCAAACCATGTaGGGTGATGAACATTTGAAGGAAATGAAGGCAATTGCCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ASSCIIHMPKDLQTM*GDEHLKEMKAIAQR Trigger: TCTTTGGGCAATTGCCTTCATTTCCTTCAAATGTTCATCACCCAACATGGTTTGCAGGTCCTTTGGCATGTGGATTATGCATGATGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CCA 72 bp | ACACATCATCTGTTCTTCCCTAATCCATCGTTAGCCTaGGATCCTCTAGCAGGATACCTCTTTGTATATCTC | + |
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Preference number: 6 (lower is better) Translates to: THHLFFPNPSLA*DPLAGYLFVYL Trigger: GAGATATACAAAGAGGTATCCTGCTAGAGGATCCCAGGCTAACGATGGATTAGGGAAGAACAGATGATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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| CDS CAA 72 bp | TTATTTGGCACCTTGCTTCTCTTATGTCCTCCTCGCTaGGACACATCATCCTTGACTGTAAGTTTCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: LFGTLLLLCPPR*DTSSLTVSFWL Trigger: TAGCCAGAAACTTACAGTCAAGGATGATGTGTCCAAGCGAGGAGGACATAAGAGAAGCAAGGTGCCAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS TCA 72 bp | CTCTTTGGTAAGTGGAGTTTCCCAACTCCCGTTCAATaGTCTGTCAAAGTTAGAATGCACATGAAAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LFGKWSFPTPVQ*SVKVRMHMKGA Trigger: TGCACCTTTCATGTGCATTCTAACTTTGACAGATCATTGAACGGGAGTTGGGAAACTCCACTTACCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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| CDS TCA 72 bp | GGTGAGTTCCTCTTTCCTCAAAGTGCTCAAATAATTTaGGGTTCCTGGGACTGTCAGAAAGTGACATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GEFLFPQSAQII*GSWDCQKVTFL Trigger: AAGGAATGTCACTTTCTGACAGTCCCAGGAACCTCAAATTATTTGAGCACTTTGAGGAAAGAGGAACTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS TCA 72 bp | CTGTTCCTTGATATGCAACTTTCTTTAGGTCAGGGATaGTACTCATCATTCACCAGTGTTGCCACTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LFLDMQLSLGQG*YSSFTSVATSS Trigger: AGAGGAAGTGGCAACACTGGTGAATGATGAGTATCATCCCTGACCTAAAGAAAGTTGCATATCAAGGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS GCA 72 bp | GCTAGAAGCCATGCCAAGGATTTGCCATCAGACTATTaGAATATCTGTATGAATTGGGTGAGTTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ARSHAKDLPSDY*NICMNWVSSSF Trigger: GAAAGAGGAACTCACCCAATTCATACAGATATTGCAATAGTCTGATGGCAAATCCTTGGCATGGCTTCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS GCA 72 bp | AGAATGTACAGAGATAAACCAGAATGTGCCTCATCATaGATAATCCACATGCCAAAGGACCTGCAAACCATG | + |
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Preference number: 6 (lower is better) Translates to: RMYRDKPECASS*IIHMPKDLQTM Trigger: CATGGTTTGCAGGTCCTTTGGCATGTGGATTATGCATGATGAGGCACATTCTGGTTTATCTCTGTACATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CAA 72 bp | TTTAAAAGCCTCAAGGCTAGAAGCCATGCCAAGGATTaGCCATCAGACTATTGCAATATCTGTATGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: FKSLKARSHAKD*PSDYCNICMNW Trigger: CCAATTCATACAGATATTGCAATAGTCTGATGGCAAATCCTTGGCATGGCTTCTAGCCTTGAGGCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS CAA 72 bp | AATGACATTATGTGTAATTCCTACCTTAAAGGTCTCTaGCTAATTACTGCTGCCAGGAGGATAATTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: NDIMCNSYLKGL*LITAARRIILP Trigger: GGGCAGAATTATCCTCCTGGCAGCAGTAATTAGCAAGAGACCTTTAAGGTAGGAATTACACATAATGTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CAA 90 bp | GGTGTTAAAAATGACATTATGTGTAATTCCTACCTTAAAGGTCTCTaGCTAATTACTGCTGCCAGGAGGATAATTCTGCCCTTTAACACC | + |
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Preference number: 6 (lower is better) Translates to: GVKNDIMCNSYLKGL*LITAARRIILPFNT Trigger: GGTGTTAAAGGGCAGAATTATCCTCCTGGCAGCAGTAATTAGCAAGAGACCTTTAAGGTAGGAATTACACATAATGTCATTTTTAACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS CCA 72 bp | TTTCCCCCTCTCGGTTGTAGTTATTCTTCACATCACTaGCTTGAACTAATCATTTGCTTTTTACTTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FPPLGCSYSSHH*LELIICFLLCH Trigger: GTGACAAAGTAAAAAGCAAATGATTAGTTCAAGCCAGTGATGTGAAGAATAACTACAACCGAGAGGGGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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| CDS CAA 72 bp | GGATTTGCCATCAGACTATTGCAATATCTGTATGAATaGGGTGAGTTCCTCTTTCCTCAAAGTGCTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: GFAIRLLQYLYE*GEFLFPQSAQI Trigger: TATTTGAGCACTTTGAGGAAAGAGGAACTCACCCAATTCATACAGATATTGCAATAGTCTGATGGCAAATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000550337.2 ENST00000662847.1 |
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| CDS CCA 72 bp | AGTAACCAGTATCTCCAATTGTGTCCTTCACATCACTaGCTTGAACTAATCATTTGCTTTTTACTTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SNQYLQLCPSHH*LELIICFLLCH Trigger: GTGACAAAGTAAAAAGCAAATGATTAGTTCAAGCCAGTGATGTGAAGGACACAATTGGAGATACTGGTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS TCA 72 bp | TCCTCTGTTGTATTCATGATTGATAGGAGTACTAATTaGTCAAAGCATTCTTTCCTGCTTGAATCTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SSVVFMIDRSTN*SKHSFLLESGC Trigger: ACATCCAGATTCAAGCAGGAAAGAATGCTTTGATCAATTAGTACTCCTATCAATCATGAATACAACAGAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662847.1 |
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| CDS GCA 72 bp | AGTCTTATTATACTTGGCCTGGTTATTTGCATAAAGTaGAGCAAGAATTGTGATTGGCTATATAGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLIILGLVICIK*SKNCDWLYRLF Trigger: AAAAAGCCTATATAGCCAATCACAATTCTTGCTGCACTTTATGCAAATAACCAGGCCAAGTATAATAAGACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550337.2 |
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