Pregenerated sensors for LINC02401 (Homo sapiens)
Ensembl gene IDs: ENSG00000257762Ensembl transcript IDs: ENST00000550185.5, ENST00000551174.1, ENST00000654623.1, ENST00000658835.1, ENST00000661201.1, ENST00000661990.1, ENST00000663320.1, ENST00000664607.1, ENST00000664661.1, ENST00000666598.1, ENST00000666854.1, ENST00000667519.1, ENST00000667724.1, ENST00000669702.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTTTGGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTTaGGAATCTCAGCCCAGGGTTGGGAGGCTAGGGCATATATACCTC | + |
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Preference number: 5 (lower is better) Translates to: VLGMWGWVLPGNPVV*ESQPRVGRLGHIYL Trigger: GAGGTATATATGCCCTAGCCTCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS GCA 90 bp | CCATCATTAAGCAGTTTAGTGTTTTGGGTATGTGGGGCTGGGTCCTaGCAGGGAACCCAGTTGTTTGGGAATCTCAGCCCAGGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PSLSSLVFWVCGAGS*QGTQLFGNLSPGLG Trigger: TCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS GCA 90 bp | CAGGTCCTGGATGTCTTCCCTCAGTTTTTCATGTGGATCATGACCTaGTCAACTCCAGTCCAACACTGCTTGAGGGATACTCCTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: QVLDVFPQFFMWIMT*STPVQHCLRDTPGG Trigger: GCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGCAGGTCATGATCCACATGAAAAACTGAGGGAAGACATCCAGGACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000654623.1 ENST00000661990.1 ENST00000666598.1 ENST00000667724.1 |
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| CDS GCA 90 bp | AAAGGCCTGGACAGGCTGGATCCATTCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCACATCAC | + |
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Preference number: 5 (lower is better) Translates to: KGLDRLDPFSTPVQH*LRDTPGGFCSSAHH Trigger: GTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGAATGGATCCAGCCTGTCCAGGCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000661201.1 ENST00000663320.1 ENST00000666854.1 ENST00000669702.1 |
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| CDS CCA 90 bp | GGGAGACAGGATGGGAAGTGTCCATCATTAAGCAGTTTAGTGTTTTaGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GRQDGKCPSLSSLVF*VCGAGSCQGTQLFG Trigger: CCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATCCTGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CCA 90 bp | GAAGTGTCCATCATTAAGCAGTTTAGTGTTTTGGGTATGTGGGGCTaGGTCCTGCCAGGGAACCCAGTTGTTTGGGAATCTCAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: EVSIIKQFSVLGMWG*VLPGNPVVWESQPR Trigger: CCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CCA 90 bp | AAAACAGGCCCAAGTTTCCAGGTGTCCTCCTCCAGTGGCGTCACATaGGCACACTTCATTCTTCCAGCAATAGTGTGTGACTGCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KTGPSFQVSSSSGVT*AHFILPAIVCDCLS Trigger: ACTCAGGCAGTCACACACTATTGCTGGAAGAATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGGGCCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS GCA 90 bp | TCTCTCTCTCTTCGAGGACGATTAACCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCACATCAC | + |
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Preference number: 5 (lower is better) Translates to: SLSLRGRLTSTPVQH*LRDTPGGFCSSAHH Trigger: GTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTTAATCGTCCTCGAAGAGAGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664661.1 |
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| CDS TCA 90 bp | CAGGGACTCTTAGTTTCACACAACACTGAGCCATGTTGCACCATGTaGCACCACACTAGCACTCTCCATTGTACACTCAAGGTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QGLLVSHNTEPCCTM*HHTSTLHCTLKVGK Trigger: CTTCCCCACCTTGAGTGTACAATGGAGAGTGCTAGTGTGGTGTCACATGGTGCAACATGGCTCAGTGTTGTGTGAAACTAAGAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000661990.1 ENST00000666598.1 ENST00000667724.1 ENST00000669702.1 |
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| CDS TCA 90 bp | CCCCAAATCTTAGTTTCACACAACACTGAGCCATGTTGCACCATGTaGCACCACACTAGCACTCTCCATTGTACACTCAAGGTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PQILVSHNTEPCCTM*HHTSTLHCTLKVGK Trigger: CTTCCCCACCTTGAGTGTACAATGGAGAGTGCTAGTGTGGTGTCACATGGTGCAACATGGCTCAGTGTTGTGTGAAACTAAGATTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000550185.5 ENST00000551174.1 ENST00000654623.1 ENST00000658835.1 ENST00000664661.1 ENST00000666854.1 |
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| CDS TCA 90 bp | CTCAGAGCTCTTTTCCCAGGGTCATTCCTGAAGACAGGCTTTTCCTaGAAATGTGCAGGGTTTGAACAACCCAGGTTTGCTGAGTTAACC | + |
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Preference number: 5 (lower is better) Translates to: LRALFPGSFLKTGFS*KCAGFEQPRFAELT Trigger: GGTTAACTCAGCAAACCTGGGTTGTTCAAACCCTGCACATTTTCAGGAAAAGCCTGTCTTCAGGAATGACCCTGGGAAAAGAGCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CCA 90 bp | GTGAACAACAATCACAGGTGTCCATTCACCAGTGAAGAGAGAATGTaGACACCTAGTGTCACACACCTGCTTTCTCTTCCATTCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: VNNNHRCPFTSEERM*TPSVTHLLSLPFPP Trigger: AGGTGGGAATGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCACTGGTGAATGGACACCTGTGATTGTTGTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS GCA 90 bp | TGTAGACTGTGTTGCTCAGAGAAGCTGTTTCCTTGTTTTAAGGGCTaGAGTACTATTAGGACCATCTCCAGGGGAGGACGGATAACTAAG | + |
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Preference number: 5 (lower is better) Translates to: CRLCCSEKLFPCFKG*STIRTISRGGRITK Trigger: CTTAGTTATCCGTCCTCCCCTGGAGATGGTCCTAATAGTACTGCAGCCCTTAAAACAAGGAAACAGCTTCTCTGAGCAACACAGTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658835.1 |
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| CDS GCA 90 bp | CATTCACCAGTGAAGAGAGAATGTGGACACCTAGTGTCACACACCTaGTTTCTCTTCCATTCCCACCTAACCAGCTTTTGTTACACTTCT | + |
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Preference number: 5 (lower is better) Translates to: HSPVKRECGHLVSHT*FLFHSHLTSFCYTS Trigger: AGAAGTGTAACAAAAGCTGGTTAGGTGGGAATGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCACTGGTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CCA 90 bp | GGAAAAGAGAGTTTGCAAATCTTTCCCATGGTATTCCAAGTTCCTTaGGGATCAATCTCTGCCCGACTCTTGCTGCTTTCCTTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GKESLQIFPMVFQVP*GSISARLLLLSFSV Trigger: CACAGAAAAGGAAAGCAGCAAGAGTCGGGCAGAGATTGATCCCCAAGGAACTTGGAATACCATGGGAAAGATTTGCAAACTCTCTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667724.1 |
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| CDS GCA 90 bp | ACCTTTCAGGAGGAGGATGGGAAAAATCTTTTCTGGAAGTTGGAATaGTTCCTTGTAGACTGTGTTGCTCAGAGAAGCTGTTTCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: TFQEEDGKNLFWKLE*FLVDCVAQRSCFLV Trigger: AACAAGGAAACAGCTTCTCTGAGCAACACAGTCTACAAGGAAGCATTCCAACTTCCAGAAAAGATTTTTCCCATCCTCCTCCTGAAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658835.1 |
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| CDS TCA 90 bp | GCACAGAAACAGCTGAAGTGGTTACAGCTGGACATTTGCCTTATTTaGACATGGTTTAAGCAGTTGGCTCCCTTCGATTGGTTAAAACTT | + |
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Preference number: 5 (lower is better) Translates to: AQKQLKWLQLDICLI*TWFKQLAPFDWLKL Trigger: AAGTTTTAACCAATCGAAGGGAGCCAACTGCTTAAACCATGTTCAAATAAGGCAAATGTCCAGCTGTAACCACTTCAGCTGTTTCTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000664607.1 ENST00000666598.1 |
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| CDS TCA 90 bp | TATACAATGTTGCTGGTGAAGACGGTTGAGATTTCATGGTCTCTTTaGACCTTTCAGGAGGAGGATGGGAAAAATCTTTTCTGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: YTMLLVKTVEISWSL*TFQEEDGKNLFWKL Trigger: CAACTTCCAGAAAAGATTTTTCCCATCCTCCTCCTGAAAGGTTCAAAGAGACCATGAAATCTCAACCGTCTTCACCAGCAACATTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658835.1 |
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| CDS CAA 72 bp | TATGTGGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTaGGGAATCTCAGCCCAGGGTTGGGAGGCTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: YVGLGPAREPSC*GISAQGWEARA Trigger: TGCCCTAGCCTCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CAA 90 bp | TGTTTTGGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTaGGGAATCTCAGCCCAGGGTTGGGAGGCTAGGGCATATATACCT | + |
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Preference number: 6 (lower is better) Translates to: CFGYVGLGPAREPSC*GISAQGWEARAYIP Trigger: AGGTATATATGCCCTAGCCTCCCAACCCTGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CAA 72 bp | CCTCAGTATCTGTGTCTCAGCTCTGCTTCTTCCAGGTaGGCTCCATGCTCAGGCTACTCGATAGCCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PQYLCLSSASSR*APCSGYSIALR Trigger: CCTGAGGGCTATCGAGTAGCCTGAGCATGGAGCCAACCTGGAAGAAGCAGAGCTGAGACACAGATACTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667724.1 |
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| CDS CAA 90 bp | GGCCTGGACAGGCTGGATCCATTCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCACATCACCTT | + |
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Preference number: 6 (lower is better) Translates to: GLDRLDPFSTPVQHC*RDTPGGFCSSAHHL Trigger: AAGGTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGAATGGATCCAGCCTGTCCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000661201.1 ENST00000663320.1 ENST00000666854.1 ENST00000669702.1 |
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| CDS GCA 72 bp | AGCAGTTTAGTGTTTTGGGTATGTGGGGCTGGGTCCTaGCAGGGAACCCAGTTGTTTGGGAATCTCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSLVFWVCGAGS*QGTQLFGNLSP Trigger: TGGGCTGAGATTCCCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CAA 72 bp | ATACTCCTGGGGGCTTTTGTTCCTCAGCACATCACCTaGTCATGTGGCCCAGGCAGAGTAGGATCTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ILLGAFVPQHIT*SCGPGRVGSGD Trigger: GTCACCAGATCCTACTCTGCCTGGGCCACATGACAAGGTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000550185.5 ENST00000654623.1 ENST00000661201.1 ENST00000661990.1 ENST00000663320.1 ENST00000664607.1 ENST00000664661.1 ENST00000666598.1 ENST00000666854.1 ENST00000667519.1 ENST00000667724.1 ENST00000669702.1 |
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| CDS CAA 90 bp | GGGGAGACAGGATGGGAAGTGTCCATCATTAAGCAGTTTAGTGTTTaGGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GETGWEVSIIKQFSV*GMWGWVLPGNPVVW Trigger: CCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATCCTGTCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS GCA 72 bp | GACAGGCTGGATCCATTCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: DRLDPFSTPVQH*LRDTPGGFCSS Trigger: TGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGAATGGATCCAGCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000661201.1 ENST00000663320.1 ENST00000666854.1 ENST00000669702.1 |
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| CDS CCA 72 bp | GATGGGAAGTGTCCATCATTAAGCAGTTTAGTGTTTTaGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: DGKCPSLSSLVF*VCGAGSCQGTQ Trigger: CTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CCA 72 bp | CCAAGTTTCCAGGTGTCCTCCTCCAGTGGCGTCACATaGGCACACTTCATTCTTCCAGCAATAGTGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PSFQVSSSSGVT*AHFILPAIVCD Trigger: GTCACACACTATTGCTGGAAGAATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | GGATGGGAAGTGTCCATCATTAAGCAGTTTAGTGTTTaGGGTATGTGGGGCTGGGTCCTGCCAGGGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: GWEVSIIKQFSV*GMWGWVLPGNP Trigger: TGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACACTTCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CAA 72 bp | TGGATCATGACCTGCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WIMTCSTPVQHC*RDTPGGFCSSA Trigger: TGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGCAGGTCATGATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654623.1 ENST00000661990.1 ENST00000666598.1 ENST00000667724.1 |
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| CDS CAA 72 bp | AGGCTGGATCCATTCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RLDPFSTPVQHC*RDTPGGFCSSA Trigger: TGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGAATGGATCCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000661201.1 ENST00000663320.1 ENST00000666854.1 ENST00000669702.1 |
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| CDS CAA 72 bp | CGAGGACGATTAACCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RGRLTSTPVQHC*RDTPGGFCSSA Trigger: TGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTTAATCGTCCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664661.1 |
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| CDS CAA 90 bp | CTCTCTCTTCGAGGACGATTAACCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCACATCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSLRGRLTSTPVQHC*RDTPGGFCSSAHHL Trigger: AAGGTGATGTGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTTAATCGTCCTCGAAGAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664661.1 |
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| CDS GCA 72 bp | ATGTGGATCATGACCTGCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: MWIMTCSTPVQH*LRDTPGGFCSS Trigger: TGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGCAGGTCATGATCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654623.1 ENST00000661990.1 ENST00000666598.1 ENST00000667724.1 |
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| CDS GCA 72 bp | CTTCGAGGACGATTAACCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LRGRLTSTPVQH*LRDTPGGFCSS Trigger: TGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTTAATCGTCCTCGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664661.1 |
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| CDS CCA 72 bp | GTGTCCATCATTAAGCAGTTTAGTGTTTTGGGTATGTaGGGCTGGGTCCTGCCAGGGAACCCAGTTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VSIIKQFSVLGM*GWVLPGNPVVW Trigger: CCAAACAACTGGGTTCCCTGGCAGGACCCAGCCCCACATACCCAAAACACTAAACTGCTTAATGATGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS CCA 72 bp | AAAAACAGGCCCAAGTTTCCAGGTGTCCTCCTCCAGTaGCGTCACATGGGCACACTTCATTCTTCCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KNRPKFPGVLLQ*RHMGTLHSSSN Trigger: ATTGCTGGAAGAATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGGGCCTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | GCTGAGTTAACCTTTGCCTACACAGGCCCCAGCTCATaGTTTACTTCCTTGGGGATGCCATCCCTAAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: AELTFAYTGPSS*FTSLGMPSLSR Trigger: CCTACTTAGGGATGGCATCCCCAAGGAAGTAAACAATGAGCTGGGGCCTGTGTAGGCAAAGGTTAACTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | ATGTGGATCATGACCTCAACTCCAGTCCAACACTGCTaGAGGGATACTCCTGGGGGCTTTTGTTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: MWIMTSTPVQHC*RDTPGGFCSSA Trigger: TGCTGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTCATGATCCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664607.1 |
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| CDS CAA 90 bp | CTTAGTTTGGGTTCTTCAAGGAACAGCTTGGGGAAATTCTTAGTTTaGGAGGTGGTCCCAGGAAACACGGGTAGGGAAATGGGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSLGSSRNSLGKFLV*EVVPGNTGREMGKG Trigger: CCCCTTCCCCATTTCCCTACCCGTGTTTCCTGGGACCACCTCCAAAACTAAGAATTTCCCCAAGCTGTTCCTTGAAGAACCCAAACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS TCA 72 bp | ATTGGGGAAGCCCTTTTGCAAAGGAGATCTGAGAGATaGGGAGGAAGTAGACACACACAGAGCCAGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: IGEALLQRRSER*GGSRHTQSQVR Trigger: TCTGACCTGGCTCTGTGTGTGTCTACTTCCTCCTCATCTCTCAGATCTCCTTTGCAAAAGGGCTTCCCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000550185.5 ENST00000661201.1 ENST00000663320.1 ENST00000666854.1 ENST00000669702.1 |
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| CDS GCA 72 bp | GTCTGCTGTTTTCTCTGCCTTAAACACTCTCTTTGGTaGTGTGTCAGGGTCCCTGAGACCATCCTTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VCCFLCLKHSLW*CVRVPETILRL Trigger: AAGCCTAAGGATGGTCTCAGGGACCCTGACACAGCACCAAAGAGAGTGTTTAAGGCAGAGAAAACAGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS GCA 72 bp | TTCATGTGGATCATGACCTCAACTCCAGTCCAACACTaGTTGAGGGATACTCCTGGGGGCTTTTGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FMWIMTSTPVQH*LRDTPGGFCSS Trigger: TGAGGAACAAAAGCCCCCAGGAGTATCCCTCAAGCAGTGTTGGACTGGAGTTGAGGTCATGATCCACATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664607.1 |
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| CDS CCA 72 bp | GGACGATTAACCTTTCCCATGGTATTCCAAGTTCCTTaGGGATCAATCTCTGCCCGACTCTTGCTGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRLTFPMVFQVP*GSISARLLLLS Trigger: GGAAAGCAGCAAGAGTCGGGCAGAGATTGATCCCCAAGGAACTTGGAATACCATGGGAAAGGTTAATCGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654623.1 ENST00000661990.1 ENST00000664607.1 ENST00000666598.1 |
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| CDS CAA 72 bp | GATAGGTCTGGCTTCAGGCACGGTTTGACTCAGGCTTaGAATGATGTCCTCAGTATCTGTGTCTCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DRSGFRHGLTQA*NDVLSICVSAL Trigger: CAGAGCTGAGACACAGATACTGAGGACATCATTCAAAGCCTGAGTCAAACCGTGCCTGAAGCCAGACCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667724.1 |
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| CDS GCA 72 bp | TGGGCACACTTCATTCTTCCAGCAATAGTGTGTGACTaGCTGAGTAAAGTGCTACCAACTAGGAATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: WAHFILPAIVCD*LSKVLPTRNLP Trigger: GGGGAGATTCCTAGTTGGTAGCACTTTACTCAGGCAGTCACACACTATTGCTGGAAGAATGAAGTGTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | GGTTCTTCAAGGAACAGCTTGGGGAAATTCTTAGTTTaGGAGGTGGTCCCAGGAAACACGGGTAGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: GSSRNSLGKFLV*EVVPGNTGREM Trigger: CATTTCCCTACCCGTGTTTCCTGGGACCACCTCCAAAACTAAGAATTTCCCCAAGCTGTTCCTTGAAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS TCA 72 bp | CTAAATTCTCTCCCTAATGTAGGTAGGGTCTGTTTTTaGTCACTGTGTACCTCCCGCACCTGTCAAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LNSLPNVGRVCF*SLCTSRTCQGS Trigger: AGACCCTTGACAGGTGCGGGAGGTACACAGTGATCAAAAACAGACCCTACCTACATTAGGGAGAGAATTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS GCA 72 bp | GTGAAGAGAGAATGTGGACACCTAGTGTCACACACCTaGTTTCTCTTCCATTCCCACCTAACCAGCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VKRECGHLVSHT*FLFHSHLTSFC Trigger: ACAAAAGCTGGTTAGGTGGGAATGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CCA 72 bp | AGTTGCTATGAAATAATAGATTGGAAGGGTCAAGAGTaGAATCGGGGATGGGCCAGTCAGGAGGATTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SCYEIIDWKGQE*NRGWASQEDLV Trigger: CACCAAATCCTCCTGACTGGCCCATCCCCGATTCCACTCTTGACCCTTCCAATCTATTATTTCATAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CCA 72 bp | AATCACAGGTGTCCATTCACCAGTGAAGAGAGAATGTaGACACCTAGTGTCACACACCTGCTTTCTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: NHRCPFTSEERM*TPSVTHLLSLP Trigger: TGGAAGAGAAAGCAGGTGTGTGACACTAGGTGTCCACATTCTCTCTTCACTGGTGAATGGACACCTGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | GTCAGGGTCCCTGAGACCATCCTTAGGCTTAATGATTaGCTAGAACTCACAGGACTCAGAAAAGCTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: VRVPETILRLND*LELTGLRKAVM Trigger: CATGACAGCTTTTCTGAGTCCTGTGAGTTCTAGCAAATCATTAAGCCTAAGGATGGTCTCAGGGACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CAA 72 bp | GAGTTTGCAAATCTTTCCCATGGTATTCCAAGTTCCTaGGGGATCAATCTCTGCCCGACTCTTGCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: EFANLSHGIPSS*GINLCPTLAAF Trigger: GAAAGCAGCAAGAGTCGGGCAGAGATTGATCCCCAAGGAACTTGGAATACCATGGGAAAGATTTGCAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667724.1 |
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| CDS TCA 72 bp | TTAGTTTCACACAACACTGAGCCATGTTGCACCATGTaGCACCACACTAGCACTCTCCATTGTACACTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVSHNTEPCCTM*HHTSTLHCTLK Trigger: CTTGAGTGTACAATGGAGAGTGCTAGTGTGGTGTCACATGGTGCAACATGGCTCAGTGTTGTGTGAAACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000550185.5 ENST00000551174.1 ENST00000654623.1 ENST00000658835.1 ENST00000661990.1 ENST00000664661.1 ENST00000666598.1 ENST00000666854.1 ENST00000667724.1 ENST00000669702.1 |
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| CDS CCA 72 bp | ACCGTGAGTGAAGGGTACAGTGAGTTAAAACAGAAGTaGGAGAAGTCTTTTAGTCCACAAGAAGGACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TVSEGYSELKQK*EKSFSPQEGLG Trigger: CCCAAGTCCTTCTTGTGGACTAAAAGACTTCTCCCACTTCTGTTTTAACTCACTGTACCCTTCACTCACGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS CCA 72 bp | GTCCCGTATGGTGTGGCCTGGACAACAATATCTTTTTaGAATCCAATTCATCAGCAGAGGCTTGTATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: VPYGVAWTTISF*NPIHQQRLVSR Trigger: TCTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGATATTGTTGTCCAGGCCACACCATACGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000550185.5 ENST00000661990.1 ENST00000669702.1 |
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| CDS CAA 72 bp | AGTCCCGTATGGTGTGGCCTGGACAACAATATCTTTTaGGAATCCAATTCATCAGCAGAGGCTTGTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPVWCGLDNNIF*ESNSSAEACIK Trigger: CTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGATATTGTTGTCCAGGCCACACCATACGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000550185.5 ENST00000661990.1 ENST00000669702.1 |
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| CDS CAA 72 bp | GAAAAATTCAGAGATAGGTCTGGCTTCAGGCACGGTTaGACTCAGGCTTTGAATGATGTCCTCAGTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: EKFRDRSGFRHG*TQALNDVLSIC Trigger: ACAGATACTGAGGACATCATTCAAAGCCTGAGTCAAACCGTGCCTGAAGCCAGACCTATCTCTGAATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667724.1 |
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| CDS CAA 90 bp | GGAGTGGTAAGTCCCGTATGGTGTGGCCTGGACAACAATATCTTTTaGGAATCCAATTCATCAGCAGAGGCTTGTATCAAGAATCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: GVVSPVWCGLDNNIF*ESNSSAEACIKNLN Trigger: ATTGAGATTCTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGATATTGTTGTCCAGGCCACACCATACGGGACTTACCACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000550185.5 ENST00000661990.1 ENST00000669702.1 |
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| CDS CAA 90 bp | GTGGTAAGTCCCGTATGGTGTGGCCTGGACAACAATATCTGCTTTTaGGAATCCAATTCATCAGCAGAGGCTTGTATCAAGAATCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: VVSPVWCGLDNNICF*ESNSSAEACIKNLN Trigger: ATTGAGATTCTTGATACAAGCCTCTGCTGATGAATTGGATTCCAAAAAGCAGATATTGTTGTCCAGGCCACACCATACGGGACTTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000654623.1 ENST00000661201.1 ENST00000663320.1 ENST00000664607.1 ENST00000664661.1 ENST00000666598.1 ENST00000666854.1 ENST00000667519.1 ENST00000667724.1 |
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| CDS CAA 72 bp | TTTAGCAATCTTAGTTTGGGTTCTTCAAGGAACAGCTaGGGGAAATTCTTAGTTTTGGAGGTGGTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: FSNLSLGSSRNS*GKFLVLEVVPG Trigger: TCCTGGGACCACCTCCAAAACTAAGAATTTCCCCAAGCTGTTCCTTGAAGAACCCAAACTAAGATTGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000550185.5 ENST00000667519.1 |
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| CDS TCA 72 bp | TTCCTGTTGATATACAATGTTGCTGGTGAAGACGGTTaGGATTTCATGGTCTCTTTGAACCTTTCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: FLLIYNVAGEDG*DFMVSLNLSGG Trigger: TCCTCCTGAAAGGTTCAAAGAGACCATGAAATCTCAACCGTCTTCACCAGCAACATTGTATATCAACAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658835.1 |
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| CDS CCA 72 bp | ATAAGCCATCCCCATCAAAATTACTCAGAGGATGTGTaGTCGGAGATGGAGTCATTTCCACATATCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: ISHPHQNYSEDV*SEMESFPHIFN Trigger: ATTAAAGATATGTGGAAATGACTCCATCTCCGACCACACATCCTCTGAGTAATTTTGATGGGGATGGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000550185.5 ENST00000551174.1 ENST00000654623.1 ENST00000658835.1 ENST00000664607.1 ENST00000664661.1 ENST00000666854.1 |
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| CDS GCA 72 bp | TTAGTCCACAAGAAGGACTTGGGATTTCATTCTATGTaGAATGGGAAGCTAGGTTTTAATGAAGGAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LVHKKDLGFHSM*NGKLGFNEGSD Trigger: ATCACTTCCTTCATTAAAACCTAGCTTCCCATTGCACATAGAATGAAATCCCAAGTCCTTCTTGTGGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550185.5 |
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| CDS GCA 72 bp | CAAATATTGACAGTTTCATGTAGTTTAACCTGTAGCTaGCTTATCTGCGTTATCTTCAGTCCGCATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QILTVSCSLTCS*LICVIFSPHFL Trigger: AAGAAAATGCGGACTGAAGATAACGCAGATAAGGCAGCTACAGGTTAAACTACATGAAACTGTCAATATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664607.1 |
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